Dictyostelium discoideum cDNA Clone SSC424

Size:		1.3k
3' sequence:	*
5' sequence:	TM981120
Whole insert?:	*
Accession #:	
Remarks:	*

Sequence SSC424

AAGACATCAA AAAATAAATA AAAAAATAAA ACTATAGTAA TAACACAAAT
AAAGCACTAT ACAAAAAAAA AAACTACATA ATATTTAATT GGGTGATTTA
ATAATAATAA ATAAAAAAAA AAAATAAAAA AGATGGAGGA TAATTATGAA
GAATATGATA ATGCTTTTGT TGGTAATTTA GGTGATATGG GTTATGGTGA
AGATACACAA GCTGCAGGCG AACCAGCTTC ACAAATTGAA AATAAACCAA
AAATATTTTT AATGGGTTTA AAAAGATCAG GTAAATCATC AATTCAAAAA
GTTGTTTTTC ATAAAATGTT ACCAAATGAA ACTTTATTTT TAGAAAGTAC
AAGTAAAGTT GTAAAGAATG ATATTTCAAA TTCATCATTC GTTCAATTTC
AAATTTGGGA TTTCCCAGGT CAATTAGATT TCTTTGATCC ATCATTCGAT
TATGAATACA TTCTCAATGA TTGTGGTGCC GTTGTTTTCG TCATTGATGC
TCAAGATGAA ATCATTGAAG CATTACAAAA ACTTCATCAA ACTATTGCTA
AAGTTTATCA AATTAACCCA AATATTCACT TTGAAGTATT CATTCACAAA
TCAGATGGTT TATCAGACGA TCACAAAATT GATAGACAAA GAGATATTCA
ACAAAAA--- -------

Translated Amino Acid Sequence SSC424

ktsknk*knktivitqikhytkkktt*ylig*fnnnk*KKKIKKMEDNYEEYDNAFVGNL
GDMGYGEDTQAAGEPASQIENKPKIFLMGLKRSGKSSIQKVVFHKMLPNETLFLESTSKV
VKNDISNSSFVQFQIWDFPGQLDFFDPSFDYEYILNDCGAVVFVIDAQDEIIEALQKLHQ
TIAKVYQINPNIHFEVFIHKSDGLSDDHKIDRQRDIQQ---

Homology SSC424 vs CSM-cDNA

Sequences producing significant alignments:                      (bits) Value


SSC424 (SSC424Q) /CSM/SS/SSC4-A/SSC424Q.Seq.d/                       1043   0.0
SSI596 (SSI596Q) /CSM/SS/SSI5-D/SSI596Q.Seq.d/                       1027   0.0
SSF223 (SSF223Q) /CSM/SS/SSF2-A/SSF223Q.Seq.d/                       1011   0.0
VFJ295 (VFJ295Q) /CSM/VF/VFJ2-D/VFJ295Q.Seq.d/                        652   0.0
VSE520 (VSE520Q) /CSM/VS/VSE5-A/VSE520Q.Seq.d/                        285   4e-76
SSC813 (SSC813Q) /CSM/SS/SSC8-A/SSC813Q.Seq.d/                         96   8e-19
VSK323 (VSK323Q) /CSM/VS/VSK3-A/VSK323Q.Seq.d/                         78   2e-13
VFN473 (VFN473Q) /CSM/VF/VFN4-D/VFN473Q.Seq.d/                         78   2e-13
SFI729 (SFI729Q) /CSM/SF/SFI7-B/SFI729Q.Seq.d/                         70   5e-11
VFH634 (VFH634Q) /CSM/VF/VFH6-B/VFH634Q.Seq.d/                         66   7e-10

Homology SSC424 vs DNA

Sequences producing significant alignments:                  (bits) Value  N


(BJ414636) Dictyostelium discoideum cDNA clone:ddv19m24, 5' ...   652   0.0    1
(AU263165) Dictyostelium discoideum vegetative cDNA clone:VS...   285   1e-89  2
(AU071740) Dictyostelium discoideum slug cDNA, clone SSC424.      216   6e-69  2
(AU072845) Dictyostelium discoideum slug cDNA, clone SSF223.      212   1e-67  2
(AU073869) Dictyostelium discoideum slug cDNA, clone SSI596.      206   6e-66  2
(FF515343) G709P583RG11.T0 Acorn worm normalized neurula pEx...    78   4e-27  3
(CV745775) SJAL_060_38.T3 SJL Schistosoma japonicum cDNA, mR...    72   9e-22  3
(AY812975) Schistosoma japonicum SJCHGC05063 protein mRNA, c...    72   9e-22  3
(EY261680) BF01015B1G09.f1 Normalized subtracted keck librar...    88   3e-19  2
(FC680930) CAXX14800.fwd CAXX Lottia gigantea from male gona...    86   6e-19  3

Homology SSC424 vs Protein

Sequences producing significant alignments:                      (bits) Value


BC154154_1(BC154154|pid:none) Danio rerio Ras-related GTP bindin...   228   1e-58
BC095626_1(BC095626|pid:none) Danio rerio Ras-related GTP bindin...   228   1e-58
BC123045_1(BC123045|pid:none) Xenopus tropicalis Ras-related GTP...   228   3e-58
AJ719695_1(AJ719695|pid:none) Gallus gallus mRNA for hypothetica...   224   2e-57
AK166658_1(AK166658|pid:none) Mus musculus 5 days embryo whole b...   223   5e-57
BC084295_1(BC084295|pid:none) Xenopus laevis hypothetical LOC495...   223   5e-57
CR853286_11(CR853286|pid:none) Zebrafish DNA sequence from clone...   222   1e-56
BC142594_1(BC142594|pid:none) Danio rerio zgc:162165, mRNA (cDNA...   221   2e-56
(Q9HB90) RecName: Full=Ras-related GTP-binding protein C;       ...   221   2e-56
AX405799_1(AX405799|pid:none) Sequence 214 from Patent WO0222660.     221   2e-56

Homology SSC424 vs Genome