Dictyostelium discoideum cDNA Clone SSC167

Size:		0.7k
3' sequence:	HM971006
5' sequence:	-
Whole insert?:	*
Accession #:	
Remarks:	*

Sequence SSC167

---------- TGGAGATCTT TGCACTATTG GGTAAGAATC CATTGATGCA
AATCGCAACA GAATTGGAAA GATTGGCACT CTCTGACAGC TATTTCATAG
AGAGACAACT CTATCCAAAT GTTGATTTCT ACTCTGGTAT CATTTACAAG
AGTATGGGTT TCCCAACTGA TATGTTTCCA GTGTTATTCT CAATTCCAAG
AGCTGCTGGT TGGTTGGCTC ATTGGGTTGA AGAATTGGCT GATCCAGAAC
TTCGTATCTT TAGACCACGT CAAATCTATA TGGGTCGTAG AAATATGAAT
TATGTTCCAA TGGATGCTCG TCAAGTTCAA CAACATAATA GTGGTGAGAA
ATTATCCTCA TTCTCTTCTG GTTTCGATCG TCGTAGAGAT GTCTCTGAAG
AACTTTTTAA TTTTGAAGAT GGTGCAATTC CAAAAACTGC CACTGGTAGT
AAATCTCAAC TATCTGCTTC AATTGAACAA TCTTTTGGTG AGAAAATATC
TCCACAAAGT CATTAAATTC AAATATTCAT TTTTGGTA

Translated Amino Acid Sequence SSC167

---EIFALLGKNPLMQIATELERLALSDSYFIERQLYPNVDFYSGIIYKSMGFPTDMFPV
LFSIPRAAGWLAHWVEELADPELRIFRPRQIYMGRRNMNYVPMDARQVQQHNSGEKLSSF
SSGFDRRRDVSEELFNFEDGAIPKTATGSKSQLSASIEQSFGEKISPQSH*iqififg

Homology SSC167 vs CSM-cDNA

Sequences producing significant alignments:                      (bits) Value


SSC167 (SSC167Q) /CSM/SS/SSC1-C/SSC167Q.Seq.d/                       1047   0.0
SLH712 (SLH712Q) /CSM/SL/SLH7-A/SLH712Q.Seq.d/                       1045   0.0
SSD179 (SSD179Q) /CSM/SS/SSD1-D/SSD179Q.Seq.d/                       1035   0.0
SSG229 (SSG229Q) /CSM/SS/SSG2-B/SSG229Q.Seq.d/                        973   0.0
SSK530 (SSK530Q) /CSM/SS/SSK5-B/SSK530Q.Seq.d/                        105   7e-22
SSG238 (SSG238Q) /CSM/SS/SSG2-B/SSG238Q.Seq.d/                        105   7e-22
SSF821 (SSF821Q) /CSM/SS/SSF8-A/SSF821Q.Seq.d/                        105   7e-22
SLD239 (SLD239Q) /CSM/SL/SLD2-B/SLD239Q.Seq.d/                        105   7e-22
SFE393 (SFE393Q) /CSM/SF/SFE3-D/SFE393Q.Seq.d/                        105   7e-22
SFC695 (SFC695Q) /CSM/SF/SFC6-D/SFC695Q.Seq.d/                        105   7e-22

Homology SSC167 vs DNA

Sequences producing significant alignments:                  (bits) Value  N


(AF310892) Dictyostelium discoideum citrate synthase (gltA) ...  1047   0.0    1
(C91905) Dictyostelium discoideum slug cDNA, clone SSC167.       1047   0.0    1
(C89713) Dictyostelium discoideum slug cDNA, clone SSG229.       1047   0.0    1
(AU062131) Dictyostelium discoideum slug cDNA, clone SLH712.     1045   0.0    1
(C92167) Dictyostelium discoideum slug cDNA, clone SSD179.       1035   0.0    1
(AU039399) Dictyostelium discoideum slug cDNA, clone SLH712.      531   e-147  1
(GR580608) CBZY667.g1 CBZY Dictyostelium purpureum 18 hr sta...   238   3e-83  3
(AB109907) Tetrahymena thermophila tgCS mRNA for putative ci...    86   7e-23  2
(EV834772) TT1D349TH Tetrahymena thermophila SB210 cDNA libr...    86   7e-23  2
(EV834773) TT1D349TV Tetrahymena thermophila SB210 cDNA libr...    86   7e-23  2

Homology SSC167 vs Protein

Sequences producing significant alignments:                      (bits) Value


AF310892_1(AF310892|pid:none) Dictyostelium discoideum citrate s...   305   7e-82
AB109907_1(AB109907|pid:none) Tetrahymena thermophila tgCS mRNA ...   154   1e-36
CP001099_363(CP001099|pid:none) Chlorobaculum parvum NCIB 8327, ...   149   6e-35
CP002271_4016(CP002271|pid:none) Stigmatella aurantiaca DW4/3-1,...   149   8e-35
AB167269_1(AB167269|pid:none) Chlorobium limicola cit gene for c...   147   2e-34
FP565575_2729(FP565575|pid:none) Candidatus Methylomirabilis oxy...   147   2e-34
CP000113_3427(CP000113|pid:none) Myxococcus xanthus DK 1622, com...   143   3e-33
AK120755_1(AK120755|pid:none) Oryza sativa Japonica Group cDNA c...   143   4e-33
AK373695_1(AK373695|pid:none) Hordeum vulgare subsp. vulgare mRN...   142   8e-33
CP000804_571(CP000804|pid:none) Roseiflexus castenholzii DSM 139...   142   8e-33

Homology SSC167 vs Genome