Homology SSB475 vs DNA
Query= SSB475 (SSB475Q) /CSM/SS/SSB4-D/SSB475Q.Seq.d/
(453 letters)
Database: ddbj_A
108,600,042 sequences; 106,710,029,556 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value N
(AF510714) Dictyostelium discoideum Rh-like glycoprotein gen... 714 0.0 2
(AF193811) Dictyostelium discoideum Rh-like glycoprotein Rhg... 714 0.0 2
(BJ432402) Dictyostelium discoideum cDNA clone:ddv18g18, 3' ... 714 0.0 2
(AU035021) Dictyostelium discoideum slug cDNA, clone SLE507. 714 0.0 2
(BJ435494) Dictyostelium discoideum cDNA clone:ddv27e12, 3' ... 714 0.0 2
(BJ432713) Dictyostelium discoideum cDNA clone:ddv19c18, 3' ... 714 0.0 2
(C90103) Dictyostelium discoideum slug cDNA, clone SSG543. 714 0.0 2
(BJ433435) Dictyostelium discoideum cDNA clone:ddv21i23, 3' ... 714 0.0 2
(C22952) Dictyostelium discoideum gamete cDNA, clone FC-AC22. 714 0.0 2
(C90098) Dictyostelium discoideum slug cDNA, clone SSG535. 714 0.0 2
(AU034985) Dictyostelium discoideum slug cDNA, clone SLE447. 714 0.0 2
(BJ433146) Dictyostelium discoideum cDNA clone:ddv20m21, 3' ... 708 0.0 2
(C94137) Dictyostelium discoideum slug cDNA, clone SSG453. 343 e-131 2
(AU038290) Dictyostelium discoideum slug cDNA, clone SSH523. 145 2e-36 2
(AF447925) Dictyostelium discoideum RhgB mRNA, complete cds. 86 2e-23 4
(AF447924) Dictyostelium discoideum RhgB mRNA, complete cds. 86 3e-23 4
(BQ152204) NF013B09IR1F1076 Irradiated Medicago truncatula c... 48 0.30 1
(ES726003) P7AP04D04_2045 old cDNA 7 days regenerating intes... 48 0.30 1
(CR847498) Zebrafish DNA sequence from clone DKEY-263P22 in ... 46 1.2 1
(EH572568) FDR202-P00042-DEPE-R_N04 FDR202 Danio rerio cDNA ... 46 1.2 1
(EH566926) FDR202-P00027-DEPE-R_I02 FDR202 Danio rerio cDNA ... 46 1.2 1
(EH551437) FDR202-P00042-DEPE-F_N04 FDR202 Danio rerio cDNA ... 46 1.2 1
(EH545783) FDR202-P00027-DEPE-F_I02 FDR202 Danio rerio cDNA ... 46 1.2 1
(BQ158663) NF066A12PL1F1087 Phosphate starved leaf Medicago ... 46 1.2 1
(CT220113) Sus scrofa genomic clone PigE-237M6, genomic surv... 34 2.0 2
(AC141868) Mus musculus BAC clone RP24-418L21 from 8, comple... 44 4.7 1
(AC109142) Mus musculus chromosome 8, clone RP23-168D5, comp... 44 4.7 1
(AC204499) Solanum tuberosum chromosome 6 clone RHPOTKEY069B... 44 4.7 1
(AZ901208) RPCI-24-189M16.TV RPCI-24 Mus musculus genomic cl... 44 4.7 1
(AG413455) Mus musculus molossinus DNA, clone:MSMg01-274N09.... 44 4.7 1
(GE652597) EST2924 Tender roots cDNA library of tea plant Ca... 44 4.7 1
(GE650816) EST1143 Tender roots cDNA library of tea plant Ca... 44 4.7 1
(GE650456) EST0783 Tender roots cDNA library of tea plant Ca... 44 4.7 1
(GE650452) EST0779 Tender roots cDNA library of tea plant Ca... 44 4.7 1
(EX285271) 1572625_5_F07_028 PY06 Carica papaya cDNA, mRNA s... 44 4.7 1
(CT009607) Mouse DNA sequence from clone RP23-134I10 on chro... 34 6.5 7
(CD512967) AGENCOURT_14366349 NIH_MGC_179 Homo sapiens cDNA ... 34 7.8 2
(AC173669) Bos taurus clone CH240-213K9, WORKING DRAFT SEQUE... 32 8.5 2
(AC172910) Bos taurus clone CH240-301L4, WORKING DRAFT SEQUE... 32 8.6 2
(AC091470) Mus musculus chromosome 3, clone RP23-237K2, comp... 32 8.8 2
>(AF510714) Dictyostelium discoideum Rh-like glycoprotein gene,
complete cds.
Length = 2175
Score = 714 bits (360), Expect(2) = 0.0
Identities = 360/360 (100%)
Strand = Plus / Plus
Query: 1 cgtaaactccacattcaagatacatgtggtattttaaatcttcattgtattccaggtttc 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1282 cgtaaactccacattcaagatacatgtggtattttaaatcttcattgtattccaggtttc 1341
Query: 61 cttggctcaatcgctgcaatctttgccgcaatcaaaggtcttaacaatccaaatatgtat 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1342 cttggctcaatcgctgcaatctttgccgcaatcaaaggtcttaacaatccaaatatgtat 1401
Query: 121 agcaaagttgaatttgaacaaattttccgtgcaggtgatagccaagcctctgcaaatctc 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1402 agcaaagttgaatttgaacaaattttccgtgcaggtgatagccaagcctctgcaaatctc 1461
Query: 181 attgcaactatggtttcaattggtttaggtattgttggtggtttactcgttggtgttatt 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1462 attgcaactatggtttcaattggtttaggtattgttggtggtttactcgttggtgttatt 1521
Query: 241 ttattacaacttaagaaaattaaaggtcttaaatcaaaagaatactaccaagatagtgct 300
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1522 ttattacaacttaagaaaattaaaggtcttaaatcaaaagaatactaccaagatagtgct 1581
Query: 301 ttctggattttaccaatcgattatccaaaagatgttgcaaccgttgttgctttaaataat 360
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1582 ttctggattttaccaatcgattatccaaaagatgttgcaaccgttgttgctttaaataat 1641
Score = 157 bits (79), Expect(2) = 0.0
Identities = 79/79 (100%)
Strand = Plus / Plus
Query: 365 tgctacctcagaagatactgctggtggcgacgatgaagaagaaggtgttggcaaagaaca 424
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1644 tgctacctcagaagatactgctggtggcgacgatgaagaagaaggtgttggcaaagaaca 1703
Query: 425 tggtgctgttgaaatgggc 443
|||||||||||||||||||
Sbjct: 1704 tggtgctgttgaaatgggc 1722
Lambda K H
1.37 0.711 1.31
Matrix: blastn matrix:1 -3
Number of Sequences: 108600042
Number of Hits to DB: 583,703,440
Number of extensions: 34412323
Number of successful extensions: 2744238
Number of sequences better than 10.0: 41
Length of query: 453
Length of database: 106,710,029,556
Length adjustment: 23
Effective length of query: 430
Effective length of database: 104,212,228,590
Effective search space: 44811258293700
Effective search space used: 44811258293700
X1: 11 (21.8 bits)
S2: 21 (42.1 bits)
Dictyostelium discoideum cDNA Project Home