<List of Series> <Series: SSB3-D> <Clone: SSB380> <SEQ> <Translated> <CSM> <DNA> <Protein> <Genome> <PSORT> <MOTIF>
Dictyostelium discoideum cDNA Clone SSB380
Dictyostelium discoideum cDNA Project Home
Size: 926
3' sequence: HO970822
5' sequence: MI971128
Whole insert?: Y
Accession #:
Remarks: *
Sequence SSB380
GTACATCAGT ATGTTCACCA CTTCCATTAG ATGAAATTGA TGATGGTAAT
CCATGTACCG ATGACCATTG TGATGAAACC ACTGGTTTAA TAACCCATAA
TATAACTACA AAATGTACAG GTTGTATGAA ATGCAATACA ACCACTGGCT
CATGTTCACC AACAAATAAT GAATGTCAAG ATGGTAATGA ATGTACTGAT
AATATTTGTG TTGCTGCAGC TACAAATATA AATCAAGGTG AATGTTCAAA
TAAGACAGTT TCATGTCCAA CCACTGATAA ATGTTTAGTA TATACTTGTG
ATACTAATAA AGGTTGTGTT TCAAAACCAG TGGTATGTCC AAATAGTGGT
AATTGTCAAG TTGGTGTTTG TGATAGTGTT AAAGGTTGTA CACTTGTACC
ACGTGTTTGT AATTCAACTG CTTTCTGTTT AGTTTCCCAA TGTGATGAAG
CTATTGGTTG TATAACTTTT GAAAAACGTT GCTCACCTGA TAATTCAAAG
TGTCAAAGTG GTGTTTGTGT TAATGCAACT GCAACTGAAC CTGGTAAATG
TAAATCTGTA GATTATGATC CTAAACCATT TATTTGCCAA ACTGGTGCAA
TAGTTTCAAC TGCTGTTGTT GCTTCTGTTG TTGTAGTAGG TGCTGTTGTT
TTAGGTGCTG CAATTTTTGC TGGTAAAAAA GGATATGATC ATTGGAAAGC
GAATCAAGGA CAAGTATTTG CAAGTAGTAA TGCAAATCCA TTGTATCAAC
AATCAAATAA TGGTGGTGAA AATGCTCTCT TTGAAGCACA TCAATAGTTT
TAAATTTTTA CTCTATCTTT CAAAATCTTA TATAATTTCT ATTTAAAAAT
TTTTACTTTT CAAATCTTTT ATTATTTATA AAAATAAAAA AAACTATTTA
ATTTAATCAA AAAAAAAAAA AAAAAA
Translated Amino Acid Sequence SSB380
<All Frames>
TSVCSPLPLDEIDDGNPCTDDHCDETTGLITHNITTKCTGCMKCNTTTGSCSPTNNECQD
GNECTDNICVAAATNINQGECSNKTVSCPTTDKCLVYTCDTNKGCVSKPVVCPNSGNCQV
GVCDSVKGCTLVPRVCNSTAFCLVSQCDEAIGCITFEKRCSPDNSKCQSGVCVNATATEP
GKCKSVDYDPKPFICQTGAIVSTAVVASVVVVGAVVLGAAIFAGKKGYDHWKANQGQVFA
SSNANPLYQQSNNGGENALFEAHQ*f*iftlsfkilynfylkiftfqifyyl*k*kklfn
likkkkkk
Homology SSB380 vs CSM-cDNA
<more CSM info>
Sequences producing significant alignments: (bits) Value
SSB380 (SSB380Q) /CSM/SS/SSB3-D/SSB380Q.Seq.d/ 1742 0.0
AHL278 (AHL278Q) /CSM/AH/AHL2-D/AHL278Q.Seq.d/ 1507 0.0
CHR326 (CHR326Q) /CSM/CH/CHR3-B/CHR326Q.Seq.d/ 1453 0.0
SSL643 (SSL643Q) /CSM/SS/SSL6-B/SSL643Q.Seq.d/ 1437 0.0
AFN401 (AFN401Q) /CSM/AF/AFN4-A/AFN401Q.Seq.d/ 1411 0.0
SSJ816 (SSJ816Q) /CSM/SS/SSJ8-A/SSJ816Q.Seq.d/ 1403 0.0
CHG109 (CHG109Q) /CSM/CH/CHG1-A/CHG109Q.Seq.d/ 1392 0.0
AFN426 (AFN426Q) /CSM/AF/AFN4-B/AFN426Q.Seq.d/ 1380 0.0
AFH708 (AFH708Q) /CSM/AF/AFH7-A/AFH708Q.Seq.d/ 1352 0.0
SHA795 (SHA795Q) /CSM/SH/SHA7-D/SHA795Q.Seq.d/ 1344 0.0
Homology SSB380 vs DNA
<more DNA info>
Sequences producing significant alignments: (bits) Value N
(AU051875) Dictyostelium discoideum slug cDNA, clone SSB380. 1580 0.0 1
(BJ385824) Dictyostelium discoideum cDNA clone:ddc56d07, 3' ... 1453 0.0 1
(BJ354521) Dictyostelium discoideum cDNA clone:dda53k20, 3' ... 1352 0.0 1
(BJ403685) Dictyostelium discoideum cDNA clone:dds25n23, 3' ... 1344 0.0 1
(BJ353862) Dictyostelium discoideum cDNA clone:dda51m18, 3' ... 1294 0.0 1
(BJ355341) Dictyostelium discoideum cDNA clone:dda56b15, 3' ... 1257 0.0 1
(C93720) Dictyostelium discoideum slug cDNA, clone SSL643. 1253 0.0 3
(BJ379163) Dictyostelium discoideum cDNA clone:ddc34a03, 3' ... 1251 0.0 1
(BJ347400) Dictyostelium discoideum cDNA clone:dda27b02, 3' ... 1251 0.0 1
(C91205) Dictyostelium discoideum slug cDNA, clone SSJ816. 1239 0.0 1
Homology SSB380 vs Protein
<more Protein info>
Sequences producing significant alignments: (bits) Value
(Q54P69) RecName: Full=Protein psiM; Flags: Precursor; 276 1e-72
(Q86HT1) RecName: Full=Protein psiL; Flags: Precursor; &AC11695... 263 8e-69
(Q557E9) RecName: Full=Protein psiG; Flags: Precursor; &AC11568... 257 7e-67
(Q94494) RecName: Full=Protein psiH; Flags: Precursor; &U67940_... 255 3e-66
(Q54VS2) RecName: Full=Protein psiP; Flags: Precursor; 222 3e-56
(Q54G85) RecName: Full=Protein psiJ; Flags: Precursor; 167 6e-40
(Q54CH8) RecName: Full=Protein psiN; Flags: Precursor; 120 8e-26
S44208(S44208) extracellular matrix protein B - Dictyostelium mi... 97 9e-19
AC116984_103(AC116984|pid:none) Dictyostelium discoideum chromos... 94 1e-17
(P11976) RecName: Full=Prestalk protein; AltName: Full=Extracell... 92 5e-17
Homology SSB380 vs Genome
<more Genome info>
<List of Series> <Series: SSB3-D> <Clone: SSB380> <SEQ> <Translated> <CSM> <DNA> <Protein> <Genome> <PSORT> <MOTIF>
Dictyostelium discoideum cDNA Project Home