Homology SSB294 vs Protein
Query= SSB294 (SSB294Q) /CSM/SS/SSB2-D/SSB294Q.Seq.d/
(562 letters)
Database: nrp_B
5,349,213 sequences; 1,732,582,204 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
EF070554_1(EF070554|pid:none) Maconellicoccus hirsutus clone WHM... 90 7e-17
AY900632_9(AY900632|pid:none) Drosophila buzzatii clone BAC 40C1... 85 2e-15
AE014297_2436(AE014297|pid:none) Drosophila melanogaster chromos... 83 7e-15
BT075749_1(BT075749|pid:none) Osmerus mordax clone omor-rgc-501-... 83 9e-15
AK151934_1(AK151934|pid:none) Mus musculus bone marrow macrophag... 82 1e-14
(Q8BNI4) RecName: Full=Derlin-2; AltName: Full=Degradation in en... 82 1e-14
JO843432_1(JO843432|pid:none) TSA: Amblyomma maculatum Am-3552 m... 81 3e-14
BC135880_1(BC135880|pid:none) Xenopus tropicalis hypothetical pr... 81 3e-14
AF208064_1(AF208064|pid:none) Mus musculus F-LANa mRNA, complete... 80 6e-14
FN357329_2(FN357329|pid:none) Schistosoma mansoni genome sequenc... 80 8e-14
BT082254_1(BT082254|pid:none) Anoplopoma fimbria clone afim-evh-... 80 8e-14
BT046729_1(BT046729|pid:none) Salmo salar clone ssal-rgb-523-158... 76 8e-13
CP000593_248(CP000593|pid:none) Ostreococcus lucimarinus CCE9901... 76 1e-12
BT127014_1(BT127014|pid:none) Dendroctonus ponderosae clone DPO1... 76 1e-12
BC167034_1(BC167034|pid:none) Rattus norvegicus Der1-like domain... 75 2e-12
AM468134_1(AM468134|pid:none) Vitis vinifera contig VV78X175529.... 75 2e-12
AB049213_1(AB049213|pid:none) Homo sapiens LLN2 gene for NADH ox... 74 5e-12
(Q96Q80) RecName: Full=Derlin-3; AltName: Full=Degradation in en... 74 5e-12
AB528119_1(AB528119|pid:none) Synthetic construct DNA, clone: pF... 74 5e-12
BC064666_1(BC064666|pid:none) Danio rerio Der1-like domain famil... 73 7e-12
(Q4G2J4) RecName: Full=Derlin-2.1; AltName: Full=ZmDerlin2-1; &... 72 2e-11
(Q851X7) RecName: Full=Derlin-2; AltName: Full=OsDerlin 2-1; &A... 72 2e-11
(Q4G2J3) RecName: Full=Derlin-2.2; AltName: Full=ZmDerlin2-2; &... 72 2e-11
AK364890_1(AK364890|pid:none) Hordeum vulgare subsp. vulgare mRN... 72 2e-11
BT081233_1(BT081233|pid:none) Caligus clemensi clone ccle-evs-50... 72 2e-11
BC004729_1(BC004729|pid:none) Mus musculus Der1-like domain fami... 72 2e-11
CP001574_86(CP001574|pid:none) Micromonas sp. RCC299 chromosome ... 71 3e-11
BT095157_1(BT095157|pid:none) Soybean clone JCVI-FLGm-6J8 unknow... 70 5e-11
(Q8VZU9) RecName: Full=Derlin-1; AltName: Full=AtDerlin1-1; &AY... 70 6e-11
(Q54NN1) RecName: Full=Probable derlin-2 homolog; 70 6e-11
AL161574_39(AL161574|pid:none) Arabidopsis thaliana DNA chromoso... 70 6e-11
BT076651_1(BT076651|pid:none) Caligus rogercresseyi clone crog-e... 70 6e-11
BC099615_1(BC099615|pid:none) Mus musculus Der1-like domain fami... 70 8e-11
BT076674_1(BT076674|pid:none) Caligus rogercresseyi clone crog-e... 70 8e-11
FP929138_758(FP929138|pid:none) Leptosphaeria maculans JN3 lm_Su... 69 1e-10
CP003012_740(CP003012|pid:none) Thielavia terrestris NRRL 8126 c... 69 1e-10
CP001327_282(CP001327|pid:none) Micromonas sp. RCC299 chromosome... 69 1e-10
EU975476_1(EU975476|pid:none) Zea mays clone 490711 unknown mRNA. 69 1e-10
AY814257_1(AY814257|pid:none) Schistosoma japonicum SJCHGC02462 ... 69 1e-10
FN357454_5(FN357454|pid:none) Schistosoma mansoni genome sequenc... 69 2e-10
BT053491_1(BT053491|pid:none) Medicago truncatula clone MTYFP_FQ... 68 3e-10
AL021890_2(AL021890|pid:none) Arabidopsis thaliana DNA chromosom... 67 4e-10
(Q8VZ96) RecName: Full=Derlin-2.1; AltName: Full=AtDerlin2-1; &... 67 4e-10
DQ311157_1(DQ311157|pid:none) Bombyx mori Der1-like domain famil... 67 4e-10
CR954203_586(CR954203|pid:none) Ostreococcus tauri strain OTTH05... 67 5e-10
(Q9ZS88) RecName: Full=Derlin-2.2; AltName: Full=AtDerlin2-2; &... 67 7e-10
FN357454_6(FN357454|pid:none) Schistosoma mansoni genome sequenc... 66 9e-10
FR824067_48(FR824067|pid:none) Albugo laibachii Nc14, genomic co... 65 1e-09
AP007164_69(AP007164|pid:none) Aspergillus oryzae RIB40 DNA, SC1... 65 1e-09
BC045413_1(BC045413|pid:none) Danio rerio Der1-like domain famil... 65 1e-09
BT120639_1(BT120639|pid:none) Lepeophtheirus salmonis clone lsal... 65 2e-09
CU633900_738(CU633900|pid:none) Podospora anserina S mat+ genomi... 65 2e-09
(Q4G2J6) RecName: Full=Derlin-1.1; AltName: Full=ZmDerlin1-1; &... 64 4e-09
(Q71SS4) RecName: Full=Derlin-1; AltName: Full=Degradation in en... 64 4e-09
AB172201_1(AB172201|pid:none) Macaca fascicularis brain cDNA clo... 64 4e-09
(Q99J56) RecName: Full=Derlin-1; AltName: Full=Degradation in en... 64 6e-09
BT093376_1(BT093376|pid:none) Soybean clone JCVI-FLGm-17O15 unkn... 64 6e-09
AJ719425_1(AJ719425|pid:none) Gallus gallus mRNA for hypothetica... 62 1e-08
EF576228_1(EF576228|pid:none) Oryza sativa (indica cultivar-grou... 62 2e-08
AL590450_192(AL590450|pid:none) chromosome XI of strain GB-M1 of... 61 3e-08
CP001952_179(CP001952|pid:none) Encephalitozoon intestinalis ATC... 61 4e-08
FR824046_72(FR824046|pid:none) Albugo laibachii Nc14, genomic co... 61 4e-08
FR824046_71(FR824046|pid:none) Albugo laibachii Nc14, genomic co... 61 4e-08
AM920435_1173(AM920435|pid:none) Penicillium chrysogenum Wiscons... 61 4e-08
(Q9VQ57) RecName: Full=Derlin-1; AltName: Full=DER1-like protein... 60 5e-08
JO842836_1(JO842836|pid:none) TSA: Amblyomma maculatum Am-8649 m... 60 8e-08
BC075205_1(BC075205|pid:none) Xenopus laevis MGC84200 protein, m... 60 8e-08
AK361992_1(AK361992|pid:none) Hordeum vulgare subsp. vulgare mRN... 60 8e-08
AM910988_171(AM910988|pid:none) Plasmodium knowlesi strain H chr... 60 8e-08
BT045455_1(BT045455|pid:none) Salmo salar clone ssal-rgf-522-034... 60 8e-08
AE014185_320(AE014185|pid:none) Plasmodium falciparum 3D7 chromo... 59 1e-07
(Q93561) RecName: Full=Derlin-1; AltName: Full=Coelomocyte uptak... 57 4e-07
AY574280_1(AY574280|pid:none) Cynodon dactylon putative Der1-lik... 57 4e-07
AC093954_10(AC093954|pid:none) Oryza sativa (japonica cultivar-g... 55 2e-06
DQ239681_1(DQ239681|pid:none) Ovis aries clone clone TO-UP-K23-3... 54 3e-06
CU329670_377(CU329670|pid:none) Schizosaccharomyces pombe chromo... 53 8e-06
(O94458) RecName: Full=Uncharacterized derlin-like protein C1687... 53 8e-06
FQ311442_165(FQ311442|pid:none) Sporisorium reilianum SRZ2 chrom... 52 1e-05
FN554974_1401(FN554974|pid:none) Trypanosoma brucei gambiense DA... 51 4e-05
FR799606_10(FR799606|pid:none) Leishmania donovani BPK282A1 comp... 51 4e-05
AM502247_24(AM502247|pid:none) Leishmania infantum chromosome 29... 51 4e-05
CR940348_833(CR940348|pid:none) Theileria annulata strain Ankara... 50 6e-05
AM055942_99(AM055942|pid:none) Toxoplasma gondii RH, genomic DNA... 50 8e-05
FR823380_108(FR823380|pid:none) Neospora caninum Liverpool compl... 50 8e-05
AM270393_15(AM270393|pid:none) Aspergillus niger contig An17c011... 49 1e-04
FR799572_12(FR799572|pid:none) Leishmania mexicana MHOM/GT/2001/... 49 1e-04
CR382137_1013(CR382137|pid:none) Debaryomyces hansenii strain CB... 49 1e-04
AM910994_368(AM910994|pid:none) Plasmodium knowlesi strain H chr... 49 2e-04
EZ422923_1(EZ422923|pid:none) TSA: Glossina morsitans morsitans ... 49 2e-04
CP000299_89(CP000299|pid:none) Cryptococcus gattii WM276 chromos... 49 2e-04
AF165818_23(AF165818|pid:none) Guillardia theta nucleomorph chro... 48 2e-04
BX538352_41(BX538352|pid:none) Cryptosporidium parvum chromosome... 48 3e-04
AE014827_9(AE014827|pid:none) Plasmodium falciparum 3D7 chromoso... 45 0.002
AK007348_1(AK007348|pid:none) Mus musculus 10 day old male pancr... 44 0.005
FR823392_615(FR823392|pid:none) Neospora caninum Liverpool compl... 43 0.010
AY814165_1(AY814165|pid:none) Schistosoma japonicum clone SJCHGC... 43 0.010
AM920435_74(AM920435|pid:none) Penicillium chrysogenum Wisconsin... 42 0.017
CR940353_697(CR940353|pid:none) Theileria annulata strain Ankara... 42 0.023
FJ976520_1(FJ976520|pid:none) Toxoplasma gondii apicoplast Der1 ... 40 0.066
FP929138_883(FP929138|pid:none) Leptosphaeria maculans JN3 lm_Su... 40 0.086
AE014187_501(AE014187|pid:none) Plasmodium falciparum 3D7 chromo... 40 0.086
CP003003_356(CP003003|pid:none) Myceliophthora thermophila ATCC ... 40 0.086
HE573027_326(HE573027|pid:none) Trypanosoma vivax Y486 annotated... 39 0.11
AK124086_1(AK124086|pid:none) Homo sapiens cDNA FLJ42092 fis, cl... 37 0.56
CP000499_296(CP000499|pid:none) Scheffersomyces stipitis CBS 605... 37 0.73
AM910990_262(AM910990|pid:none) Plasmodium knowlesi strain H chr... 36 0.95
AL034556_5(AL034556|pid:none) Plasmodium falciparum MAL3P5, comp... 36 1.2
FR823388_427(FR823388|pid:none) Neospora caninum Liverpool compl... 35 1.6
CR940348_28(CR940348|pid:none) Theileria annulata strain Ankara ... 35 2.1
HE605206_25(HE605206|pid:none) Candida parapsilosis strain CDC31... 34 3.6
CP002737_1614(CP002737|pid:none) Methanotorris igneus Kol 5, com... 34 4.7
AM502251_216(AM502251|pid:none) Leishmania infantum chromosome 3... 33 6.2
CP001085_110(CP001085|pid:none) Candidatus Riesia pediculicola U... 31 7.7
CT005270_216(CT005270|pid:none) Leishmania major strain Friedlin... 33 8.1
CR382133_642(CR382133|pid:none) Debaryomyces hansenii chromosome... 33 8.1
HE573027_1352(HE573027|pid:none) Trypanosoma vivax Y486 annotate... 33 8.1
>EF070554_1(EF070554|pid:none) Maconellicoccus hirsutus clone
WHMH3011 putative Der1-like domain family, member 2
mRNA, complete cds.
Length = 245
Score = 89.7 bits (221), Expect = 7e-17
Identities = 50/161 (31%), Positives = 77/161 (47%)
Frame = +1
Query: 13 QYTTRLESLNYAGKSDDYXXXXXXXXXXXXXXXXXXEYYFLGTMTIMSLIYIYSRMNPTG 192
+Y LE ++ G++ D+ FLG + L+Y+++R NP
Sbjct: 80 RYCKMLEEGSFRGRTADFVVMFVFGGVCMICCAFFTNLLFLGQAFTIMLVYVWARRNPYL 139
Query: 193 TSNFYGFFSFKTIYLPWVFLVAHFLQTGHPPYSDFLAIVSGHIFFYLTDIYPRANGVPAL 372
NF+G +F+ YLPWV L+ L G+ DFL + GH++FYL D++P G +
Sbjct: 140 RMNFFGLLNFQAPYLPWVLLIFSVL-LGNTVIVDFLGMGVGHLYFYLEDVFPNLQGGFRV 198
Query: 373 IKTPKFITNIFNKGXXXXXXXXXXXXTGRPIQEGGYNWGQG 495
++TP F+ IF+ G RP GG+NWG G
Sbjct: 199 LRTPNFLKEIFD-GRPIDPDYNPLPEDDRP---GGFNWGGG 235
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 5349213
Number of Hits to DB: 1,299,188,121
Number of extensions: 24937998
Number of successful extensions: 52779
Number of sequences better than 10.0: 116
Number of HSP's gapped: 52654
Number of HSP's successfully gapped: 117
Length of query: 187
Length of database: 1,732,582,204
Length adjustment: 124
Effective length of query: 63
Effective length of database: 1,069,279,792
Effective search space: 67364626896
Effective search space used: 67364626896
Neighboring words threshold: 12
Window for multiple hits: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
S2: 30 (16.2 bits)
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