Dictyostelium discoideum cDNA Clone SSB294

Size:		0.9k
3' sequence:	TS980501
5' sequence:	*
Whole insert?:	*
Accession #:	
Remarks:	*

Sequence SSB294

---------- ATCAATATAC AACTAGATTA GAGAGTTTAA ATTATGCAGG
AAAATCAGAT GATTATTTAT TTTGTATAAT TTTTATTTCA ATTTGTAATA
TTATATTTGG ACTTATCTTT GAATATTATT TCTTAGGTAC AATGACTATT
ATGTCATTGA TTTACATTTA CTCAAGAATG AATCCAACTG GTACAAGTAA
TTTCTATGGA TTCTTTTCAT TCAAAACCAT TTATTTACCA TGGGTATTTT
TAGTAGCACA TTTCCTTCAA ACTGGTCATC CACCATATAG CGATTTCTTG
GCAATCGTAT CTGGTCATAT CTTCTTTTAT TTGACTGATA TCTATCCAAG
AGCTAATGGT GTACCAGCTT TAATCAAAAC TCCAAAATTC ATTACAAACA
TCTTTAATAA AGGTGACAGA AATCCAAATA ATGTTCGTAG AGATCCAAGA
ACTGGTAGAC CAATTCAAGA AGGTGGTTAT AATTGGGGTC AAGGTCATGC
ACTTGGTTAA TTAAAAATTT TAATAATTTT AAAAATTAAA AAATAATAAT
AATAATAATA AA

Translated Amino Acid Sequence SSB294

---QYTTRLESLNYAGKSDDYLFCIIFISICNIIFGLIFEYYFLGTMTIMSLIYIYSRMN
PTGTSNFYGFFSFKTIYLPWVFLVAHFLQTGHPPYSDFLAIVSGHIFFYLTDIYPRANGV
PALIKTPKFITNIFNKGDRNPNNVRRDPRTGRPIQEGGYNWGQGHALG*lkiliilkikk
******

Homology SSB294 vs CSM-cDNA

Sequences producing significant alignments:                      (bits) Value


SSH533 (SSH533Q) /CSM/SS/SSH5-B/SSH533Q.Seq.d/                        751   0.0
SSG502 (SSG502Q) /CSM/SS/SSG5-A/SSG502Q.Seq.d/                        751   0.0
SSB294 (SSB294Q) /CSM/SS/SSB2-D/SSB294Q.Seq.d/                        751   0.0
FC-IC0973 (FC-IC0973Q) /CSM/FC-IC/FC-IC0973Q.Seq.d/                   337   1e-91
FC-IC0287 (FC-IC0287Q) /CSM/FC-IC/FC-IC0287Q.Seq.d/                   337   1e-91
FC-IC0285 (FC-IC0285Q) /CSM/FC-IC/FC-IC0285Q.Seq.d/                   337   1e-91
FC-IC0283 (FC-IC0283Q) /CSM/FC-IC/FC-IC0283Q.Seq.d/                   331   7e-90
VSE452 (VSE452Q) /CSM/VS/VSE4-C/VSE452Q.Seq.d/                         34   2.2
VHH138 (VHH138Q) /CSM/VH/VHH1-B/VHH138Q.Seq.d/                         34   2.2
SHC325 (SHC325Q) /CSM/SH/SHC3-B/SHC325Q.Seq.d/                         34   2.2

Homology SSB294 vs DNA

Sequences producing significant alignments:                  (bits) Value  N


(AU037081) Dictyostelium discoideum slug cDNA, clone SSB294.      743   0.0    2
(AU038298) Dictyostelium discoideum slug cDNA, clone SSH533.      743   0.0    2
(C90072) Dictyostelium discoideum slug cDNA, clone SSG502.        743   0.0    2
(AU272020) Dictyostelium discoideum gamete cDNA clone:FC-IC0...   337   3e-88  1
(AU271483) Dictyostelium discoideum gamete cDNA clone:FC-IC0...   337   3e-88  1
(AU271482) Dictyostelium discoideum gamete cDNA clone:FC-IC0...   337   3e-88  1
(AU271481) Dictyostelium discoideum gamete cDNA clone:FC-IC0...   337   3e-88  1
(AU271478) Dictyostelium discoideum gamete cDNA clone:FC-IC0...   331   2e-86  1
(AF082555) HIV-1 isolate THSC97 from Thailand, envelope glyc...    46   1.6    1
(AF025759) HIV-1 isolate SFMHS16.5 from San Francisco, envel...    44   6.4    1

Homology SSB294 vs Protein

Sequences producing significant alignments:                      (bits) Value


EF070554_1(EF070554|pid:none) Maconellicoccus hirsutus clone WHM...    90   7e-17
AY900632_9(AY900632|pid:none) Drosophila buzzatii clone BAC 40C1...    85   2e-15
AE014297_2436(AE014297|pid:none) Drosophila melanogaster chromos...    83   7e-15
BT075749_1(BT075749|pid:none) Osmerus mordax clone omor-rgc-501-...    83   9e-15
AK151934_1(AK151934|pid:none) Mus musculus bone marrow macrophag...    82   1e-14
(Q8BNI4) RecName: Full=Derlin-2; AltName: Full=Degradation in en...    82   1e-14
JO843432_1(JO843432|pid:none) TSA: Amblyomma maculatum Am-3552 m...    81   3e-14
BC135880_1(BC135880|pid:none) Xenopus tropicalis hypothetical pr...    81   3e-14
AF208064_1(AF208064|pid:none) Mus musculus F-LANa mRNA, complete...    80   6e-14
FN357329_2(FN357329|pid:none) Schistosoma mansoni genome sequenc...    80   8e-14

Homology SSB294 vs Genome