<List of Series> <Series: SSA8-C> <Clone: SSA872> <SEQ> <Translated> <CSM> <DNA> <Protein> <Genome> <PSORT> <MOTIF>
Dictyostelium discoideum cDNA Clone SSA872
Dictyostelium discoideum cDNA Project Home
Size: 0.8k
3' sequence: HO971014
5' sequence: TS981215
Whole insert?: *
Accession #:
Remarks: *
Sequence SSA872
ATTATTATAA ATTTATTATT AAATTATTAA TTAAATATTA TTTTTTTGAA
AAATGGTTCT AGGGGATAAT GAAAACACAA TTGTTAGTTC CAAGCTAATT
TTAACAACAT TGACAACAAA ATTAATTAGT AGATACTTTA AGAAAGAATT
TAAATTTAGT TATTTTATTT ACTGTTTAGT TTATATTATT GGTAAAAATA
TAAAATTTTT TAGAAGGGAT CCAGATAAAA AACCATCAAT TTTAAAGATG
AATTTTCTAC TATTGTTTGT CTTTTCAAAT GTGCTCTCTG GGGTTTA---
-------CCA TCAATCTTAA AGATGAATTT TCTACTATTG TTTGTCTTCT
CAAATGTGCT CTCTGGGGTG TATTATCTGT ATCAAGATTG TAATGAAACT
TTTTCAAAAA ACAATGACCC TGATTTATAT TTAATTGGAT TGATATTACT
TATTTTTCAA GATGATAGTT TTCCACATGT TTTTATTCAT ATTACTGATC
TTTATTTAAA TATTACTAAA TTTATTGAAA TTAGAAAACA AAGAAAAAAA
GAAAAAAAAT TAAATAAAAA GGCAGAGATG CACAAAAAAA TTACAAAAAA
AACCATTTGA AAAAGATTTG GACGGTGCTG GTGGAGATGA TAGTGGTGAA
GATGACTATT TTGAAGAAAT AATGTGTGTA AA
Translated Amino Acid Sequence SSA872
<All Frames>
ll*iyy*iin*ilff*KMVLGDNENTIVSSKLILTTLTTKLISRYFKKEFKFSYFIYCLV
YIIGKNIKFFRRDPDKKPSILKMNFLLLFVFSNVLSGV---
---PSILKMNFLLLFVFSNVLSGVYYLYQDCNETFSKNNDPDLYLIGLILLIFQDDSFPH
VFIHITDLYLNITKFIEIRKQRKKEKKLNKKAEMHKKITKKTI*krfgrcwwr**w*r*l
f*rnnvck
Homology SSA872 vs CSM-cDNA
<more CSM info>
Sequences producing significant alignments: (bits) Value
SSA872 (SSA872Q) /CSM/SS/SSA8-C/SSA872Q.Seq.d/ 892 0.0
SSF292 (SSF292Q) /CSM/SS/SSF2-D/SSF292Q.Seq.d/ 260 2e-68
SSF882 (SSF882Q) /CSM/SS/SSF8-D/SSF882Q.Seq.d/ 117 2e-25
CHH634 (CHH634Q) /CSM/CH/CHH6-B/CHH634Q.Seq.d/ 101 1e-20
CFD455 (CFD455Q) /CSM/CF/CFD4-C/CFD455Q.Seq.d/ 40 0.043
VSK256 (VSK256Q) /CSM/VS/VSK2-C/VSK256Q.Seq.d/ 38 0.17
VHI390 (VHI390Q) /CSM/VH/VHI3-D/VHI390Q.Seq.d/ 38 0.17
VFI221 (VFI221Q) /CSM/VF/VFI2-A/VFI221Q.Seq.d/ 38 0.17
VSF196 (VSF196Q) /CSM/VS/VSF1-D/VSF196Q.Seq.d/ 36 0.67
VSA896 (VSA896Q) /CSM/VS/VSA8-D/VSA896Q.Seq.d/ 36 0.67
Homology SSA872 vs DNA
<more DNA info>
Sequences producing significant alignments: (bits) Value N
(AU051790) Dictyostelium discoideum slug cDNA, clone SSA872. 450 e-155 2
(AU072877) Dictyostelium discoideum slug cDNA, clone SSF292. 274 4e-73 2
(AU072787) Dictyostelium discoideum slug cDNA, clone SSA872. 196 3e-55 2
(C84810) Dictyostelium discoideum slug cDNA, clone SSF882. 117 6e-54 4
(BJ365974) Dictyostelium discoideum cDNA clone:ddc37c10, 5' ... 68 2e-31 3
(AU073078) Dictyostelium discoideum slug cDNA, clone SSF882. 68 4e-18 2
(AE014296) Drosophila melanogaster chromosome 3L, complete s... 38 0.21 2
(AC011911) Drosophila melanogaster 3L BAC RP98-48J5 (Roswell... 38 0.28 2
(AC014964) Drosophila melanogaster, *** SEQUENCING IN PROGRE... 38 0.31 2
(CU929455) Zebrafish DNA sequence from clone CH73-211L16 in ... 40 0.34 4
Homology SSA872 vs Protein
<more Protein info>
Homology SSA872 vs Genome
<more Genome info>
<List of Series> <Series: SSA8-C> <Clone: SSA872> <SEQ> <Translated> <CSM> <DNA> <Protein> <Genome> <PSORT> <MOTIF>
Dictyostelium discoideum cDNA Project Home