Homology SSA537 vs DNA
Query= SSA537 (SSA537Q) /CSM/SS/SSA5-B/SSA537Q.Seq.d/
(1216 letters)
Database: ddbj_A
108,600,042 sequences; 106,710,029,556 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value N
(C83895) Dictyostelium discoideum slug cDNA, clone SSA537. 896 0.0 2
(AU034771) Dictyostelium discoideum slug cDNA, clone SLE313. 880 0.0 2
(BJ357378) Dictyostelium discoideum cDNA clone:dda63j10, 3' ... 888 0.0 3
(AU061452) Dictyostelium discoideum slug cDNA, clone SLE313. 862 0.0 1
(BJ338887) Dictyostelium discoideum cDNA clone:dda63j10, 5' ... 504 0.0 2
(BJ344243) Dictyostelium discoideum cDNA clone:dda18j22, 3' ... 638 e-178 1
(AU072689) Dictyostelium discoideum slug cDNA, clone SSA537. 476 e-129 1
(GR578081) CBZY1030.b1 CBZY Dictyostelium purpureum 18 hr st... 78 1e-31 4
(GR583116) CCAA1376.b1 CCAA Dictyostelium purpureum 0 hr sta... 78 1e-23 4
(BJ414618) Dictyostelium discoideum cDNA clone:ddv19i19, 5' ... 58 3e-23 3
(AU272304) Dictyostelium discoideum gamete cDNA clone:FC-IC1... 103 2e-17 1
(AU272303) Dictyostelium discoideum gamete cDNA clone:FC-IC1... 103 2e-17 1
(BJ432799) Dictyostelium discoideum cDNA clone:ddv19i19, 3' ... 68 3e-17 2
(AU039000) Dictyostelium discoideum slug cDNA, clone SSM258. 68 3e-17 2
(BJ339794) Dictyostelium discoideum cDNA clone:dda10l12, 3' ... 68 3e-17 2
(C93368) Dictyostelium discoideum slug cDNA, clone SSM708. 68 3e-17 2
(GR570845) CBTG1501.b1 CBTG Dictyostelium purpureum 12 hr ve... 78 3e-16 3
(GR584126) CCAA2183.b1 CCAA Dictyostelium purpureum 0 hr sta... 74 1e-14 3
(GR584446) CCAA2433.b1 CCAA Dictyostelium purpureum 0 hr sta... 74 7e-09 2
(AU072828) Dictyostelium discoideum slug cDNA, clone SSF190. 70 2e-07 1
(BJ377082) Dictyostelium discoideum cDNA clone:ddc22e14, 3' ... 68 2e-07 2
(AU271684) Dictyostelium discoideum gamete cDNA clone:FC-IC0... 58 9e-04 1
(GR566930) CBTF2713.g1 CBTF Dictyostelium purpureum 12 hr ve... 40 0.091 2
(GR588230) CCAB791.g1 CCAB Dictyostelium purpureum 0 hr star... 40 0.16 2
(GR586004) CCAB1207.g1 CCAB Dictyostelium purpureum 0 hr sta... 40 0.20 2
(GR583180) CCAA1421.g1 CCAA Dictyostelium purpureum 0 hr sta... 40 0.21 2
(GR578082) CBZY1030.g1 CBZY Dictyostelium purpureum 18 hr st... 40 0.22 2
(GR584447) CCAA2433.g1 CCAA Dictyostelium purpureum 0 hr sta... 40 0.22 2
(AM434210) Vitis vinifera contig VV78X084038.8, whole genome... 38 0.30 4
(EJ230224) 1092402581901 Global-Ocean-Sampling_GS-27-01-01-1... 38 0.55 2
(ER420479) 1092963701360 Global-Ocean-Sampling_GS-35-01-01-1... 38 0.78 3
(CU694464) Zebrafish DNA sequence from clone CH73-67A10 in l... 48 0.84 1
(CT670778) Danio rerio EST, clone ZF_mu_169m19 5'. 48 0.84 1
(DE434803) Bombyx mori genomic DNA, Fosmid clone:GBMFno20_p1... 42 1.5 2
(AM459595) Vitis vinifera contig VV78X179488.2, whole genome... 38 1.7 2
(FP565224) Pig DNA sequence *** SEQUENCING IN PROGRESS *** f... 38 2.0 4
(EG237542) MSAM152212_2475_0968 LCM-dissected maize inbred l... 38 2.2 2
(EG106201) MSAM180067_1296_2807 LCM-dissected maize inbred l... 38 2.2 2
(FD346492) CBPN26062.b1 CBPN: Subtracted channel catfish cDN... 36 2.3 2
(AC134219) Rattus norvegicus clone CH230-35M8, *** SEQUENCIN... 34 3.2 9
(AM464236) Vitis vinifera, whole genome shotgun sequence, co... 46 3.3 1
(AL353757) Human DNA sequence from clone RP11-439I8 on chrom... 46 3.3 1
(AC109803) Homo sapiens chromosome 3 clone RP11-37F14, WORKI... 46 3.3 1
(AC109554) Rattus norvegicus clone CH230-331D3, *** SEQUENCI... 46 3.3 1
(AC107510) Rattus norvegicus clone CH230-138J6, *** SEQUENCI... 46 3.3 1
(AC221091) Bos taurus clone CH240-392N5, WORKING DRAFT SEQUE... 46 3.3 1
(AC016150) Homo sapiens chromosome X clone RP11-503D9, WORKI... 46 3.3 1
(AC011987) Homo sapiens clone RP11-19B13, WORKING DRAFT SEQU... 46 3.3 1
(AM738664) Cucumis melo subsp. melo EST, clone 15d_01-E02-M13R. 46 3.3 1
(BM064293) KS01065D06 KS01 Capsicum annuum cDNA, mRNA sequence. 46 3.3 1
(CP000117) Anabaena variabilis ATCC 29413, complete genome. 46 3.3 1
(AE001437) Clostridium acetobutylicum ATCC 824, complete gen... 46 3.3 1
(DB830606) Nilaparvata lugens mRNA, EST clone:NLNB8422, 5' e... 38 3.4 2
(AM481392) Vitis vinifera contig VV78X145211.7, whole genome... 36 3.9 2
(FS182824) Solanum lycopersicum cDNA, clone: LEFL3024K07, 5'... 36 5.1 2
(AM459030) Vitis vinifera, whole genome shotgun sequence, co... 38 6.3 3
(FP236706) Pig DNA sequence *** SEQUENCING IN PROGRESS *** f... 32 7.0 6
(AM441605) Vitis vinifera contig VV78X016871.6, whole genome... 36 7.7 2
(AC078816) Homo sapiens 3 BAC RP11-600P18 (Roswell Park Canc... 40 8.0 4
(BW639217) Dugesia ryukyuensis mRNA, clone: Dr_sW_014_A07, 5... 32 8.4 2
(CP001668) Mycoplasma mycoides subsp. capri str. GM12 transg... 36 8.4 18
(CP001621) Mycoplasma mycoides subsp. capri str. GM12 transg... 36 8.8 18
>(C83895) Dictyostelium discoideum slug cDNA, clone SSA537.
Length = 531
Score = 896 bits (452), Expect(2) = 0.0
Identities = 452/452 (100%)
Strand = Plus / Plus
Query: 686 aaatgtaagaatgcaccaacttgtggtgatttatcaacttgtgatccatccattcttacc 745
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1 aaatgtaagaatgcaccaacttgtggtgatttatcaacttgtgatccatccattcttacc 60
Query: 746 gaagttatgtcttgtgattgggtagatgttagttctgttaattcttgctctcaaggtggt 805
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 61 gaagttatgtcttgtgattgggtagatgttagttctgttaattcttgctctcaaggtggt 120
Query: 806 tgccaatacaaccaacaagttgtaaatactacaaaacaaattatgcaactttatgatatc 865
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 121 tgccaatacaaccaacaagttgtaaatactacaaaacaaattatgcaactttatgatatc 180
Query: 866 ttaacttcactcactactctttggactgataaagttgtaccattaattaaatgttcatat 925
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 181 ttaacttcactcactactctttggactgataaagttgtaccattaattaaatgttcatat 240
Query: 926 cttatgccattcatagatgaagttcaaaatattgtttgcgttgatgaagttaattcttta 985
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 241 cttatgccattcatagatgaagttcaaaatattgtttgcgttgatgaagttaattcttta 300
Query: 986 gatctcttaatagctccaactgcagtgtttgccattttattaactggacttggtattact 1045
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 301 gatctcttaatagctccaactgcagtgtttgccattttattaactggacttggtattact 360
Query: 1046 ggtatcttaggaagtaagagatttaattccaaataccgtgtaaagggaagtagatcagct 1105
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 361 ggtatcttaggaagtaagagatttaattccaaataccgtgtaaagggaagtagatcagct 420
Query: 1106 taattccttgattatcaagtttttactataat 1137
||||||||||||||||||||||||||||||||
Sbjct: 421 taattccttgattatcaagtttttactataat 452
Score = 117 bits (59), Expect(2) = 0.0
Identities = 59/59 (100%)
Strand = Plus / Plus
Query: 1150 caaaatcgactgttaaatatttgaataacttaaataaagtttatttattttctaaaatt 1208
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 465 caaaatcgactgttaaatatttgaataacttaaataaagtttatttattttctaaaatt 523
Lambda K H
1.37 0.711 1.31
Matrix: blastn matrix:1 -3
Number of Sequences: 108600042
Number of Hits to DB: 1,497,223,383
Number of extensions: 92402498
Number of successful extensions: 7160257
Number of sequences better than 10.0: 63
Length of query: 1216
Length of database: 106,710,029,556
Length adjustment: 24
Effective length of query: 1192
Effective length of database: 104,103,628,548
Effective search space: 124091525229216
Effective search space used: 124091525229216
X1: 11 (21.8 bits)
S2: 22 (44.1 bits)
Dictyostelium discoideum cDNA Project Home