Dictyostelium discoideum cDNA Clone SSA461

Size:		1.1k
3' sequence:	*
5' sequence:	TM980718
Whole insert?:	*
Accession #:	
Remarks:	*

Sequence SSA461

ATTTAGAGAT ACAACAACAT TTACAACAAC AACAACAAAT TAAACAATCG
AGCCAACAAC CATTATACGA TGATGATTTT GTTGATGAAA ATATTGAAAT
CCTATTTCAT GATGAGAGAA TTCAAACATT AGTAGGTTTC CAAATTATTA
ATATAAAGAG TGATTTGAAA TCATTGAGAA AAGAAATTGA TGATATGGAA
ATTCCAGAAT TAAAAGGTTT GGAATTTAGA TTCATGTTAA AAAAAATTCC
AATTTCTTTG AAACAAGAAT CAAATTATAT TATTAAAGAT TGTTTATTCT
CAATGAATGG TAGAATTACA ATTGAAATTA GATCAATCAT TCCAACAATT
GTTTCTGCTA CTCCAACAAA TGCAACTCCA ATTAATAATA ACGGTGGTGG
CGGTGGTGTT AATAGTGTAA ATTTAATGTC ACCTGCTCAA ACTCCAAAGA
ACTTATCTTT ACAATCTCCA ACACCTTTCA ATATTTCATC GGTTCCTGAT
TTATCTGCAC TTGCCAATCA TCCATTA--- -------

Translated Amino Acid Sequence SSA461

LEIQQHLQQQQQIKQSSQQPLYDDDFVDENIEILFHDERIQTLVGFQIINIKSDLKSLRK
EIDDMEIPELKGLEFRFMLKKIPISLKQESNYIIKDCLFSMNGRITIEIRSIIPTIVSAT
PTNATPINNNGGGGGVNSVNLMSPAQTPKNLSLQSPTPFNISSVPDLSALANHP---

Homology SSA461 vs CSM-cDNA

Sequences producing significant alignments:                      (bits) Value


SSA461 (SSA461Q) /CSM/SS/SSA4-C/SSA461Q.Seq.d/                        878   0.0
CFC634 (CFC634Q) /CSM/CF/CFC6-B/CFC634Q.Seq.d/                        878   0.0
SSM727 (SSM727Q) /CSM/SS/SSM7-B/SSM727Q.Seq.d/                        862   0.0
CFA833 (CFA833Q) /CSM/CF/CFA8-B/CFA833Q.Seq.d/                        567   e-161
AFG320 (AFG320Q) /CSM/AF/AFG3-A/AFG320Q.Seq.d/                        430   e-120
SLG623 (SLG623Q) /CSM/SL/SLG6-A/SLG623Q.Seq.d/                         46   5e-04
MIT-GENOME (MIT-GENOMEQ) /CSM/OTHERS/MIT-GENOMEQ.Seq.d/                46   5e-04
FC-IC1096 (FC-IC1096Q) /CSM/FC-IC/FC-IC1096Q.Seq.d/                    46   5e-04
VHN191 (VHN191Q) /CSM/VH/VHN1-D/VHN191Q.Seq.d/                         40   0.034
SFI361 (SFI361Q) /CSM/SF/SFI3-C/SFI361Q.Seq.d/                         36   0.53

Homology SSA461 vs DNA

Sequences producing significant alignments:                  (bits) Value  N


(BJ360472) Dictyostelium discoideum cDNA clone:ddc6c10, 5' e...   557   0.0    2
(BJ359739) Dictyostelium discoideum cDNA clone:ddc2b10, 5' e...   353   e-159  3
(BJ325174) Dictyostelium discoideum cDNA clone:dda13h05, 5' ...   347   e-120  3
(AU072649) Dictyostelium discoideum slug cDNA, clone SSA461.      353   5e-93  1
(AU075012) Dictyostelium discoideum slug cDNA, clone SSM727.      347   3e-91  1
(GR576503) CBXW1686.b1 CBXW Dictyostelium purpureum 6 hr veg...    46   2e-09  3
(GR574109) CBXU1934.g1 CBXU Dictyostelium purpureum 6 hr veg...    46   2e-09  3
(EY317458) CAWX27583.fwd CAWX Helobdella robusta Primary Ear...    50   0.092  1
(AC214393) Oryza punctata clone OP__Ba0013L16, *** SEQUENCIN...    48   0.36   1
(CW776782) OP__Ba0072H21.r OP__Ba Oryza punctata genomic clo...    48   0.36   1

Homology SSA461 vs Protein

Sequences producing significant alignments:                      (bits) Value


FM864216_551(FM864216|pid:none) Mycoplasma conjunctivae HRC/581T...    36   1.1
CU179680_244(CU179680|pid:none) Mycoplasma agalactiae PG2 chromo...    33   5.4
FN393075_174(FN393075|pid:none) Saccharomyces cerevisiae EC1118 ...    33   5.4
CP002469_1294(CP002469|pid:none) Vibrio vulnificus MO6-24/O chro...    33   5.4
(P47048) RecName: Full=Uncharacterized protein YJL049W;  &AY6926...    33   7.1
(Q54DD0) RecName: Full=AMP deaminase;          EC=3.5.4.6;             33   7.1
CP000492_1727(CP000492|pid:none) Chlorobium phaeobacteroides DSM...    33   9.2

Homology SSA461 vs Genome