Homology SSA423 vs Protein
Query= SSA423 (SSA423Q) /CSM/SS/SSA4-A/SSA423Q.Seq.d/
(453 letters)
Database: nrp_B
5,349,213 sequences; 1,732,582,204 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
CR954216_234(CR954216|pid:none) Ostreococcus tauri strain OTTH05... 42 0.014
AX588489_1(AX588489|pid:none) Sequence 364 from Patent WO02083898. 38 0.21
T21694(T21694)hypothetical protein F33C8.1 - Caenorhabditis eleg... 37 0.36
(Q19981) RecName: Full=Putative protein tag-53; Flags: Precursor... 37 0.36
Z69790_3(Z69790|pid:none) Caenorhabditis elegans Cosmid F33C8, c... 37 0.36
AE014134_1537(AE014134|pid:none) Drosophila melanogaster chromos... 37 0.47
AL954359_1(AL954359|pid:none) Zebrafish DNA sequence from clone ... 36 0.61
BC051121_1(BC051121|pid:none) Mus musculus multiple EGF-like-dom... 36 0.79
CR388098_1(CR388098|pid:none) Zebrafish DNA sequence from clone ... 35 1.0
GQ222417_1(GQ222417|pid:none) Bos taurus breed Galloway attracti... 35 1.8
AF531101_1(AF531101|pid:none) Bos taurus attractin mRNA, complet... 35 1.8
AF218910_1(AF218910|pid:none) Homo sapiens attractin precursor (... 35 1.8
AF106861_1(AF106861|pid:none) Homo sapiens attractin-2 (ATRN) mR... 35 1.8
AL132773_3(AL132773|pid:none) Human DNA sequence from clone RP4-... 35 1.8
AL109805_2(AL109805|pid:none) Human DNA sequence from clone RP4-... 35 1.8
AB038388_1(AB038388|pid:none) Rattus norvegicus Atrn mRNA for at... 35 1.8
AB093245_1(AB093245|pid:none) Mus musculus mRNA for mKIAA0548 pr... 35 1.8
AK302730_1(AK302730|pid:none) Homo sapiens cDNA FLJ58441 complet... 35 1.8
AB011120_1(AB011120|pid:none) Homo sapiens mRNA for KIAA0548 pro... 35 1.8
AB062913_1(AB062913|pid:none) Mesocricetus auratus Atrn mRNA for... 35 1.8
(Q9NTQ3) RecName: Full=Attractin; AltName: Full=DPPT-L; AltName:... 35 1.8
EU589567_1(EU589567|pid:none) Bos taurus attractin (ATRN) mRNA, ... 35 1.8
BC141054_1(BC141054|pid:none) Mus musculus attractin, mRNA (cDNA... 35 1.8
(Q9WU60) RecName: Full=Attractin; AltName: Full=Protein mahogany... 35 1.8
AF218915_1(AF218915|pid:none) Homo sapiens attractin precursor (... 35 1.8
(Q6A051) RecName: Full=Attractin-like protein 1; Flags: Precurso... 34 2.3
AY688677_1(AY688677|pid:none) Mus musculus attractin-like protei... 34 2.3
AK050882_1(AK050882|pid:none) Mus musculus 9 days embryo whole b... 34 2.3
AK172967_1(AK172967|pid:none) Mus musculus mRNA for mKIAA0534 pr... 34 3.0
(Q8I7T3) RecName: Full=Substrate-adhesion molecule; Flags: Precu... 34 3.0
HE601627_503(HE601627|pid:none) Schistosoma mansoni strain Puert... 33 3.9
AY051898_1(AY051898|pid:none) Drosophila melanogaster LD38671 fu... 33 3.9
BT050540_1(BT050540|pid:none) Drosophila melanogaster LD14047 fu... 33 3.9
BT011125_1(BT011125|pid:none) Drosophila melanogaster LD07466 fu... 33 3.9
(Q9QYP0) RecName: Full=Multiple epidermal growth factor-like dom... 33 3.9
AE014297_4597(AE014297|pid:none) Drosophila melanogaster chromos... 33 3.9
AY280362_1(AY280362|pid:none) Homo sapiens EGF domain-containing... 33 5.2
AK127277_1(AK127277|pid:none) Homo sapiens cDNA FLJ45344 fis, cl... 33 5.2
AB046770_1(AB046770|pid:none) Homo sapiens mRNA for KIAA1550 pro... 33 5.2
AK294917_1(AK294917|pid:none) Homo sapiens cDNA FLJ50149 complet... 33 5.2
(Q5VV63) RecName: Full=Attractin-like protein 1; Flags: Precurso... 33 5.2
AB011541_1(AB011541|pid:none) Homo sapiens mRNA for MEGF8, parti... 33 5.2
T00266(T00266)hypothetical protein KIAA0534 - human (fragment) 33 5.2
BC141298_1(BC141298|pid:none) Mus musculus plexin A4, mRNA (cDNA... 33 5.2
AB011106_1(AB011106|pid:none) Homo sapiens mRNA for KIAA0534 pro... 33 5.2
FN357474_3(FN357474|pid:none) Schistosoma mansoni genome sequenc... 33 6.7
CP001328_76(CP001328|pid:none) Micromonas sp. RCC299 chromosome ... 33 6.7
AE014135_180(AE014135|pid:none) Drosophila melanogaster chromoso... 32 8.8
AF106932_1(AF106932|pid:none) Drosophila melanogaster plexin A (... 32 8.8
BC089263_1(BC089263|pid:none) Xenopus laevis hypothetical protei... 32 8.8
AE014135_182(AE014135|pid:none) Drosophila melanogaster chromoso... 32 8.8
>CR954216_234(CR954216|pid:none) Ostreococcus tauri strain OTTH0595,
*** SEQUENCING IN PROGRESS ***.
Length = 6767
Score = 41.6 bits (96), Expect = 0.014
Identities = 17/45 (37%), Positives = 23/45 (51%)
Frame = +2
Query: 140 CGEYTSCGDCREDKGCVWCGSEGICTEGTFYGTKPLNINGACKDF 274
CG +CG+C + GC WC + G CT G+ P +G C F
Sbjct: 168 CGSALTCGECSDVSGCGWCHTTGRCTASKIDGSGPQ--DGRCSTF 210
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 5349213
Number of Hits to DB: 840,197,323
Number of extensions: 13112912
Number of successful extensions: 30640
Number of sequences better than 10.0: 51
Number of HSP's gapped: 30614
Number of HSP's successfully gapped: 55
Length of query: 151
Length of database: 1,732,582,204
Length adjustment: 113
Effective length of query: 38
Effective length of database: 1,128,121,135
Effective search space: 42868603130
Effective search space used: 42868603130
Neighboring words threshold: 12
Window for multiple hits: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
S2: 29 (15.8 bits)
Dictyostelium discoideum cDNA Project Home