Homology SSA393 vs DNA
Query= SSA393 (SSA393Q) /CSM/SS/SSA3-D/SSA393Q.Seq.d/
(264 letters)
Database: ddbj_A
108,600,042 sequences; 106,710,029,556 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value N
(C83858) Dictyostelium discoideum slug cDNA, clone SSA393. 474 e-130 1
(AF203735) Dictyostelium discoideum culmination specific pro... 466 e-127 1
(AU269567) Dictyostelium discoideum vegetative cDNA clone:VS... 466 e-127 1
(AU268411) Dictyostelium discoideum vegetative cDNA clone:VS... 466 e-127 1
(AU267845) Dictyostelium discoideum vegetative cDNA clone:VS... 466 e-127 1
(AU266811) Dictyostelium discoideum vegetative cDNA clone:VS... 466 e-127 1
(AU265215) Dictyostelium discoideum vegetative cDNA clone:VS... 466 e-127 1
(AU264732) Dictyostelium discoideum vegetative cDNA clone:VS... 466 e-127 1
(C93194) Dictyostelium discoideum slug cDNA, clone SSM760. 466 e-127 1
(C92616) Dictyostelium discoideum slug cDNA, clone SSF321. 466 e-127 1
(C89819) Dictyostelium discoideum slug cDNA, clone SSG194. 466 e-127 1
(BJ422664) Dictyostelium discoideum cDNA clone:ddv46l16, 5' ... 466 e-127 1
(BJ394431) Dictyostelium discoideum cDNA clone:dds35j03, 5' ... 466 e-127 1
(BJ394240) Dictyostelium discoideum cDNA clone:dds34i12, 5' ... 466 e-127 1
(BJ367711) Dictyostelium discoideum cDNA clone:ddc43p16, 5' ... 466 e-127 1
(BJ359164) Dictyostelium discoideum cDNA clone:ddc13j03, 5' ... 466 e-127 1
(BJ422552) Dictyostelium discoideum cDNA clone:ddv46f07, 5' ... 458 e-125 1
(AU261759) Dictyostelium discoideum vegetative cDNA clone:VS... 454 e-124 1
(BJ392143) Dictyostelium discoideum cDNA clone:dds26f14, 5' ... 432 e-122 2
(AU037528) Dictyostelium discoideum slug cDNA, clone SSD750. 444 e-121 1
(AU051872) Dictyostelium discoideum slug cDNA, clone SSB372. 440 e-119 1
(BJ368559) Dictyostelium discoideum cDNA clone:ddc47o05, 5' ... 387 e-103 1
(BJ372555) Dictyostelium discoideum cDNA clone:ddc13j03, 3' ... 353 e-103 3
(BJ383782) Dictyostelium discoideum cDNA clone:ddc47o05, 3' ... 381 e-102 1
(AU265216) Dictyostelium discoideum vegetative cDNA clone:VS... 373 2e-99 1
(AU268412) Dictyostelium discoideum vegetative cDNA clone:VS... 371 9e-99 1
(AU264733) Dictyostelium discoideum vegetative cDNA clone:VS... 367 1e-97 1
(AU071383) Dictyostelium discoideum slug cDNA, clone SSB372. 363 2e-96 1
(AU267846) Dictyostelium discoideum vegetative cDNA clone:VS... 307 4e-96 2
(BJ406163) Dictyostelium discoideum cDNA clone:dds34i12, 3' ... 307 6e-95 2
(BJ403869) Dictyostelium discoideum cDNA clone:dds26f14, 3' ... 268 4e-90 2
(AU269568) Dictyostelium discoideum vegetative cDNA clone:VS... 327 1e-85 1
(AU074819) Dictyostelium discoideum slug cDNA, clone SSM163. 323 2e-84 1
(AU071276) Dictyostelium discoideum slug cDNA, clone SSB104. 319 3e-83 1
(AU073935) Dictyostelium discoideum slug cDNA, clone SSI772. 299 3e-77 1
(BJ406395) Dictyostelium discoideum cDNA clone:dds35j03, 3' ... 131 1e-26 1
(C94097) Dictyostelium discoideum slug cDNA, clone SSG405. 78 2e-10 1
(GR582712) CBZZ893.g1 CBZZ Dictyostelium purpureum 18 hr sta... 62 1e-05 1
(GR582711) CBZZ893.b1 CBZZ Dictyostelium purpureum 18 hr sta... 62 1e-05 1
(GR582325) CBZZ2101.b1 CBZZ Dictyostelium purpureum 18 hr st... 62 1e-05 1
(GR582256) CBZZ2050.g1 CBZZ Dictyostelium purpureum 18 hr st... 62 1e-05 1
(GR581648) CBZZ1522.g1 CBZZ Dictyostelium purpureum 18 hr st... 62 1e-05 1
(GR581647) CBZZ1522.b1 CBZZ Dictyostelium purpureum 18 hr st... 62 1e-05 1
(GR581028) CBZZ1002.g1 CBZZ Dictyostelium purpureum 18 hr st... 62 1e-05 1
(GR577914) CBXW907.g1 CBXW Dictyostelium purpureum 6 hr vege... 62 1e-05 1
(GR576846) CBXW1931.g1 CBXW Dictyostelium purpureum 6 hr veg... 62 1e-05 1
(AC132493) Oryza sativa Japonica Group chromosome 5 clone P0... 48 0.17 1
(AC205569) Zea mays chromosome 4 clone CH201-241P10; ZMMBBc0... 40 0.46 2
(AC131144) Rattus norvegicus clone CH230-96D7, *** SEQUENCIN... 46 0.67 1
(AC097118) Rattus norvegicus clone CH230-36G3, *** SEQUENCIN... 46 0.67 1
(AC216101) Pongo abelii chromosome UNKNOWN clone CH276-203P8... 46 0.67 1
(ET031872) MUGQ_CH252P333O20Sp6_GL531_066 CHORI-252 Vervet M... 46 0.67 1
(ER873949) MUGQ_CH252P262M01Sp6_CN537_003 CHORI-252 Vervet M... 46 0.67 1
(U41279) Caenorhabditis elegans cosmid C17C3, complete seque... 38 2.2 3
(AL592308) Human DNA sequence from clone RP13-610P22 on chro... 44 2.7 1
(AC155870) Bos taurus clone CH240-30A24, WORKING DRAFT SEQUE... 44 2.7 1
(AC125741) Rattus norvegicus clone CH230-20N24, *** SEQUENCI... 44 2.7 1
(CU928298) Pig DNA sequence *** SEQUENCING IN PROGRESS *** f... 44 2.7 1
(CU855680) Pig DNA sequence *** SEQUENCING IN PROGRESS *** f... 44 2.7 1
(AC055805) Homo sapiens chromosome 1 clone RP11-224D11 map 1... 44 2.7 1
(AC213789) Zea mays chromosome 8 clone CH201-27O3; ZMMBBc002... 44 2.7 1
(AC210826) Zea mays chromosome 4 clone CH201-396O18; ZMMBBc0... 44 2.7 1
(AC208969) Zea mays chromosome 1 clone CH201-148G18; ZMMBBc0... 44 2.7 1
(AC203669) Zea mays chromosome 8 clone CH201-425D2; ZMMBBc04... 44 2.7 1
(AC203179) Zea mays chromosome 6 clone CH201-175I20; ZMMBBc0... 44 2.7 1
(AC199936) Zea mays chromosome 8 clone CH201-174K5; ZMMBBc01... 44 2.7 1
(ET683588) CHO_OF341xg14r1.ab1 CHO_OF Nicotiana tabacum geno... 44 2.7 1
(ET683460) CHO_OF341xg13r1.ab1 CHO_OF Nicotiana tabacum geno... 44 2.7 1
(CC548297) CH240_432G5.TARBAC13P2 CHORI-240 Bos taurus genom... 44 2.7 1
(AG949206) Drosophila ananassae DNA, clone: DNB1-028I12.F.fa... 38 3.5 2
(AC210039) Zea mays chromosome 6 clone ZMMBBb-110D3; ZMMBBb0... 38 3.7 2
(AC223291) Bos taurus clone CH240-423J20, WORKING DRAFT SEQU... 36 5.0 4
(AC222505) Bos taurus clone CH240-420B2, WORKING DRAFT SEQUE... 38 5.6 2
(BV276135) S232P6352FF10.T0 Beagle Canis familiaris STS geno... 38 6.7 2
(AC012478) Homo sapiens chromosome 15 clone RP11-386M24, com... 42 6.9 3
(AC091544) Homo sapiens chromosome 15, clone RP11-386M24, co... 42 7.0 3
(GO569445) Mdltx7528D24_e26359.g1 Apple_EST_Mdltx Malus x do... 30 9.7 3
>(C83858) Dictyostelium discoideum slug cDNA, clone SSA393.
Length = 264
Score = 474 bits (239), Expect = e-130
Identities = 239/239 (100%)
Strand = Plus / Plus
Query: 26 caaaatggttctttcagaaaaagttgacaaaaatgttagattagaccgtagatcttgtgc 85
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 26 caaaatggttctttcagaaaaagttgacaaaaatgttagattagaccgtagatcttgtgc 85
Query: 86 agcttacagaggcactgaaaagaagaatggacatggtcaatatggttggggcgatatcaa 145
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 86 agcttacagaggcactgaaaagaagaatggacatggtcaatatggttggggcgatatcaa 145
Query: 146 cgatgaaatccaggctggtgaagaagaattctacgaagaacaagaggaacttaagaaata 205
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 146 cgatgaaatccaggctggtgaagaagaattctacgaagaacaagaggaacttaagaaata 205
Query: 206 gttacctttcatgtactctttctctcccctcaaataaaaattgtataaatgtacataaa 264
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 206 gttacctttcatgtactctttctctcccctcaaataaaaattgtataaatgtacataaa 264
Lambda K H
1.37 0.711 1.31
Matrix: blastn matrix:1 -3
Number of Sequences: 108600042
Number of Hits to DB: 347,991,881
Number of extensions: 21411132
Number of successful extensions: 1685560
Number of sequences better than 10.0: 78
Length of query: 264
Length of database: 106,710,029,556
Length adjustment: 23
Effective length of query: 241
Effective length of database: 104,212,228,590
Effective search space: 25115147090190
Effective search space used: 25115147090190
X1: 11 (21.8 bits)
S2: 21 (42.1 bits)
Dictyostelium discoideum cDNA Project Home