Homology SSA379 vs DNA

Query= SSA379 (SSA379Q) /CSM/SS/SSA3-D/SSA379Q.Seq.d/
         (428 letters)

Database: ddbj_A
           108,600,042 sequences; 106,710,029,556 total letters

Searching..................................................done

                                                             Score    E
Sequences producing significant alignments:                  (bits) Value  N

(C93758) Dictyostelium discoideum slug cDNA, clone SSL684.        420   e-141  2
(BJ378378) Dictyostelium discoideum cDNA clone:ddc31b19, 3' ...   404   e-132  2
(AU072607) Dictyostelium discoideum slug cDNA, clone SSA379.      329   e-119  2
(GR579434) CBZY2070.g1 CBZY Dictyostelium purpureum 18 hr st...    38   3e-13  4
(AC222676) Bos taurus clone CH240-442C12, WORKING DRAFT SEQU...    46   1.1    1
(AC221190) Bos taurus clone CH240-397J13, WORKING DRAFT SEQU...    46   1.1    1
(AC175732) Bos taurus clone CH240-397J21, WORKING DRAFT SEQU...    46   1.1    1
(AC167011) Bos taurus clone CH240-87N2, WORKING DRAFT SEQUEN...    46   1.1    1
(AC093910) Homo sapiens BAC clone RP11-762H11 from 2, comple...    40   2.0    3
(AC176868) Strongylocentrotus purpuratus clone R3-31D9, WORK...    36   3.1    3
(AC011583) Homo sapiens clone RP11-13H8, WORKING DRAFT SEQUE...    40   3.5    2
(EY144091) CBTH8930.b1_D01.ab1:P Triphysaria pusilla root ti...    40   3.6    2
(AC010983) Homo sapiens BAC clone RP11-484E10 from 2, comple...    40   4.3    2
(AY093607) HIV-1 isolate 99DE4057, gag protein (gag) and pol...    44   4.5    1
(BV664988) S216P6472RA10.T0 Masuku Pan troglodytes troglodyt...    44   4.5    1
(AC192803) Pan troglodytes BAC clone CH251-429M12 from chrom...    44   4.5    1
(AC187754) Pan troglodytes BAC clone CH251-670H2 from chromo...    44   4.5    1
(AP009566) Lotus japonicus genomic DNA, chromosome 2, clone:...    44   4.5    1
(AM431646) Vitis vinifera contig VV78X206088.8, whole genome...    44   4.5    1
(DL173715) Methods for Identifying the Target of a Compound ...    44   4.5    1
(AX489275) Sequence 6575 from Patent WO02053728.                   44   4.5    1
(AR550049) Sequence 5180 from patent US 6747137.                   44   4.5    1
(AC006374) Homo sapiens BAC clone RP11-357D2 from 7, complet...    44   4.5    1
(FP340583) Pig DNA sequence *** SEQUENCING IN PROGRESS *** f...    44   4.5    1
(CU856203) Pig DNA sequence *** SEQUENCING IN PROGRESS *** f...    44   4.5    1
(AC218593) Bos taurus clone CH240-311E17, WORKING DRAFT SEQU...    44   4.5    1
(AC213945) Equus caballus clone CH241-504P1, WORKING DRAFT S...    44   4.5    1
(AC168162) Bos taurus clone CH240-234P22, WORKING DRAFT SEQU...    44   4.5    1
(EJ510319) 1095407071591 Global-Ocean-Sampling_GS-28-01-01-1...    44   4.5    1
(EJ351534) 1092963591735 Global-Ocean-Sampling_GS-28-01-01-1...    44   4.5    1
(DH455553) Macropus eugenii DNA with T3 primer, fosmid clone...    44   4.5    1
(BP058093) Lotus japonicus cDNA, clone:SPDL097d04_f, 3' end.       44   4.5    1
(GO041158) LJNBA73TO JCVI-LJ3 Lotus japonicus cDNA 3', mRNA ...    44   4.5    1
(GO034999) LJNAN03TF JCVI-LJ3 Lotus japonicus cDNA 5', mRNA ...    44   4.5    1
(FN283625) Trypanosoma congolense isolate IL3000 EST read TC...    44   4.5    1
(EL446748) CHTM25549.b1_I04.ab1 CHT(LMS) Jerusalem artichoke...    34   5.9    2

>(C93758) Dictyostelium discoideum slug cDNA, clone SSL684.
          Length = 673

 Score =  420 bits (212), Expect(2) = e-141
 Identities = 227/232 (97%)
 Strand = Plus / Plus


Query: 78  tactaaaaaagaatggatggaacaatcaaagagaaccagaaaatggtttagattatcaaa 137
           ||||||||| ||||||||||||||||||| | || |||||||||||||||||||||||||
Sbjct: 349 tactaaaaaggaatggatggaacaatcaaggggacccagaaaatggtttagattatcaaa 408


Query: 138 tgtattatcatttattgtaccaattaaaccacatattgaagctgccatcgttcatataca 197
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 409 tgtattatcatttattgtaccaattaaaccacatattgaagctgccatcgttcatataca 468


Query: 198 aagatcaattgtaacattacaacaacaattgaattctcaatttgatcttatcaatacacc 257
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 469 aagatcaattgtaacattacaacaacaattgaattctcaatttgatcttatcaatacacc 528


Query: 258 aattgaaaatttccccttggatgaaatcaccgaatttgtaattgaggaatgt 309
           |||||||||||||||||||||||||||| |||||||||||||||||||||||
Sbjct: 529 aattgaaaatttccccttggatgaaatccccgaatttgtaattgaggaatgt 580

 Score =  115 bits (58), Expect(2) = e-141
 Identities = 64/66 (96%)
 Strand = Plus / Plus


Query: 1   cccaaaatcactttagctgatcataataaaggtgtaaacattacttattatcctttattt 60
           ||||||||| |||| |||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 272 cccaaaatccctttggctgatcataataaaggtgtaaacattacttattatcctttattt 331


Query: 61  gttggt 66
           ||||||
Sbjct: 332 gttggt 337

Lambda     K      H
    1.37    0.711     1.31

Matrix: blastn matrix:1 -3
Number of Sequences: 108600042
Number of Hits to DB: 413,646,391
Number of extensions: 24877908
Number of successful extensions: 2231805
Number of sequences better than 10.0: 36
Length of query: 428
Length of database: 106,710,029,556
Length adjustment: 23
Effective length of query: 405
Effective length of database: 104,212,228,590
Effective search space: 42205952578950
Effective search space used: 42205952578950
X1: 11 (21.8 bits)
S2: 21 (42.1 bits)




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