Homology SSA379 vs DNA
Query= SSA379 (SSA379Q) /CSM/SS/SSA3-D/SSA379Q.Seq.d/
(428 letters)
Database: ddbj_A
108,600,042 sequences; 106,710,029,556 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value N
(C93758) Dictyostelium discoideum slug cDNA, clone SSL684. 420 e-141 2
(BJ378378) Dictyostelium discoideum cDNA clone:ddc31b19, 3' ... 404 e-132 2
(AU072607) Dictyostelium discoideum slug cDNA, clone SSA379. 329 e-119 2
(GR579434) CBZY2070.g1 CBZY Dictyostelium purpureum 18 hr st... 38 3e-13 4
(AC222676) Bos taurus clone CH240-442C12, WORKING DRAFT SEQU... 46 1.1 1
(AC221190) Bos taurus clone CH240-397J13, WORKING DRAFT SEQU... 46 1.1 1
(AC175732) Bos taurus clone CH240-397J21, WORKING DRAFT SEQU... 46 1.1 1
(AC167011) Bos taurus clone CH240-87N2, WORKING DRAFT SEQUEN... 46 1.1 1
(AC093910) Homo sapiens BAC clone RP11-762H11 from 2, comple... 40 2.0 3
(AC176868) Strongylocentrotus purpuratus clone R3-31D9, WORK... 36 3.1 3
(AC011583) Homo sapiens clone RP11-13H8, WORKING DRAFT SEQUE... 40 3.5 2
(EY144091) CBTH8930.b1_D01.ab1:P Triphysaria pusilla root ti... 40 3.6 2
(AC010983) Homo sapiens BAC clone RP11-484E10 from 2, comple... 40 4.3 2
(AY093607) HIV-1 isolate 99DE4057, gag protein (gag) and pol... 44 4.5 1
(BV664988) S216P6472RA10.T0 Masuku Pan troglodytes troglodyt... 44 4.5 1
(AC192803) Pan troglodytes BAC clone CH251-429M12 from chrom... 44 4.5 1
(AC187754) Pan troglodytes BAC clone CH251-670H2 from chromo... 44 4.5 1
(AP009566) Lotus japonicus genomic DNA, chromosome 2, clone:... 44 4.5 1
(AM431646) Vitis vinifera contig VV78X206088.8, whole genome... 44 4.5 1
(DL173715) Methods for Identifying the Target of a Compound ... 44 4.5 1
(AX489275) Sequence 6575 from Patent WO02053728. 44 4.5 1
(AR550049) Sequence 5180 from patent US 6747137. 44 4.5 1
(AC006374) Homo sapiens BAC clone RP11-357D2 from 7, complet... 44 4.5 1
(FP340583) Pig DNA sequence *** SEQUENCING IN PROGRESS *** f... 44 4.5 1
(CU856203) Pig DNA sequence *** SEQUENCING IN PROGRESS *** f... 44 4.5 1
(AC218593) Bos taurus clone CH240-311E17, WORKING DRAFT SEQU... 44 4.5 1
(AC213945) Equus caballus clone CH241-504P1, WORKING DRAFT S... 44 4.5 1
(AC168162) Bos taurus clone CH240-234P22, WORKING DRAFT SEQU... 44 4.5 1
(EJ510319) 1095407071591 Global-Ocean-Sampling_GS-28-01-01-1... 44 4.5 1
(EJ351534) 1092963591735 Global-Ocean-Sampling_GS-28-01-01-1... 44 4.5 1
(DH455553) Macropus eugenii DNA with T3 primer, fosmid clone... 44 4.5 1
(BP058093) Lotus japonicus cDNA, clone:SPDL097d04_f, 3' end. 44 4.5 1
(GO041158) LJNBA73TO JCVI-LJ3 Lotus japonicus cDNA 3', mRNA ... 44 4.5 1
(GO034999) LJNAN03TF JCVI-LJ3 Lotus japonicus cDNA 5', mRNA ... 44 4.5 1
(FN283625) Trypanosoma congolense isolate IL3000 EST read TC... 44 4.5 1
(EL446748) CHTM25549.b1_I04.ab1 CHT(LMS) Jerusalem artichoke... 34 5.9 2
>(C93758) Dictyostelium discoideum slug cDNA, clone SSL684.
Length = 673
Score = 420 bits (212), Expect(2) = e-141
Identities = 227/232 (97%)
Strand = Plus / Plus
Query: 78 tactaaaaaagaatggatggaacaatcaaagagaaccagaaaatggtttagattatcaaa 137
||||||||| ||||||||||||||||||| | || |||||||||||||||||||||||||
Sbjct: 349 tactaaaaaggaatggatggaacaatcaaggggacccagaaaatggtttagattatcaaa 408
Query: 138 tgtattatcatttattgtaccaattaaaccacatattgaagctgccatcgttcatataca 197
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 409 tgtattatcatttattgtaccaattaaaccacatattgaagctgccatcgttcatataca 468
Query: 198 aagatcaattgtaacattacaacaacaattgaattctcaatttgatcttatcaatacacc 257
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 469 aagatcaattgtaacattacaacaacaattgaattctcaatttgatcttatcaatacacc 528
Query: 258 aattgaaaatttccccttggatgaaatcaccgaatttgtaattgaggaatgt 309
|||||||||||||||||||||||||||| |||||||||||||||||||||||
Sbjct: 529 aattgaaaatttccccttggatgaaatccccgaatttgtaattgaggaatgt 580
Score = 115 bits (58), Expect(2) = e-141
Identities = 64/66 (96%)
Strand = Plus / Plus
Query: 1 cccaaaatcactttagctgatcataataaaggtgtaaacattacttattatcctttattt 60
||||||||| |||| |||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 272 cccaaaatccctttggctgatcataataaaggtgtaaacattacttattatcctttattt 331
Query: 61 gttggt 66
||||||
Sbjct: 332 gttggt 337
Lambda K H
1.37 0.711 1.31
Matrix: blastn matrix:1 -3
Number of Sequences: 108600042
Number of Hits to DB: 413,646,391
Number of extensions: 24877908
Number of successful extensions: 2231805
Number of sequences better than 10.0: 36
Length of query: 428
Length of database: 106,710,029,556
Length adjustment: 23
Effective length of query: 405
Effective length of database: 104,212,228,590
Effective search space: 42205952578950
Effective search space used: 42205952578950
X1: 11 (21.8 bits)
S2: 21 (42.1 bits)
Dictyostelium discoideum cDNA Project Home