Dictyostelium discoideum cDNA Clone SSA379

Size:		0.5k
3' sequence:	*
5' sequence:	TM980718
Whole insert?:	*
Accession #:	
Remarks:	*

Sequence SSA379

CCCAAAATCA CTTTAGCTGA TCATAATAAA GGTGTAAACA TTACTTATTA
TCCTTTATTT GTTGGTAAAA AAAAGAATAC TAAAAAAGAA TGGATGGAAC
AATCAAAGAG AACCAGAAAA TGGTTTAGAT TATCAAATGT ATTATCATTT
ATTGTACCAA TTAAACCACA TATTGAAGCT GCCATCGTTC ATATACAAAG
ATCAATTGTA ACATTACAAC AACAATTGAA TTCTCAATTT GATCTTATCA
ATACACCAAT TGAAAATTTC CCCTTGGATG AAATCACCGA ATTTGTAATT
GAGGAATGTA AAAAACAAAA AAAAAAAGAT AAAAAAGGTA AAAAAGATAA
AAAAGATAAA AAAGATAAAA AAGATAAAAA AAAAAAAAAA AAAAAAAAAA
AAAAAAAAAA AAAAAAAA-- --------

Translated Amino Acid Sequence SSA379

PKITLADHNKGVNITYYPLFVGKKKNTKKEWMEQSKRTRKWFRLSNVLSFIVPIKPHIEA
AIVHIQRSIVTLQQQLNSQFDLINTPIENFPLDEITEFVIEECKKQKKKDKKGKKDKKDK
KDKKDKKKKKKKKKKKKKK---

Homology SSA379 vs CSM-cDNA

Sequences producing significant alignments:                      (bits) Value


SSA379 (SSA379Q) /CSM/SS/SSA3-D/SSA379Q.Seq.d/                        563   e-160
SSL684 (SSL684Q) /CSM/SS/SSL6-D/SSL684Q.Seq.d/                        500   e-140
CHE773 (CHE773Q) /CSM/CH/CHE7-D/CHE773Q.Seq.d/                        470   e-132
SSF456 (SSF456Q) /CSM/SS/SSF4-C/SSF456Q.Seq.d/                        105   5e-22
SSD562 (SSD562Q) /CSM/SS/SSD5-C/SSD562Q.Seq.d/                         36   0.42
SLB330 (SLB330Q) /CSM/SL/SLB3-B/SLB330Q.Seq.d/                         36   0.42
SFK347 (SFK347Q) /CSM/SF/SFK3-B/SFK347Q.Seq.d/                         36   0.42
SFK324 (SFK324Q) /CSM/SF/SFK3-A/SFK324Q.Seq.d/                         36   0.42
SFI409 (SFI409Q) /CSM/SF/SFI4-A/SFI409Q.Seq.d/                         36   0.42
SFG457 (SFG457Q) /CSM/SF/SFG4-C/SFG457Q.Seq.d/                         36   0.42

Homology SSA379 vs DNA

Sequences producing significant alignments:                  (bits) Value  N


(C93758) Dictyostelium discoideum slug cDNA, clone SSL684.        420   e-141  2
(BJ378378) Dictyostelium discoideum cDNA clone:ddc31b19, 3' ...   404   e-132  2
(AU072607) Dictyostelium discoideum slug cDNA, clone SSA379.      329   e-119  2
(GR579434) CBZY2070.g1 CBZY Dictyostelium purpureum 18 hr st...    38   3e-13  4
(AC222676) Bos taurus clone CH240-442C12, WORKING DRAFT SEQU...    46   1.1    1
(AC221190) Bos taurus clone CH240-397J13, WORKING DRAFT SEQU...    46   1.1    1
(AC175732) Bos taurus clone CH240-397J21, WORKING DRAFT SEQU...    46   1.1    1
(AC167011) Bos taurus clone CH240-87N2, WORKING DRAFT SEQUEN...    46   1.1    1
(AC093910) Homo sapiens BAC clone RP11-762H11 from 2, comple...    40   2.0    3
(AC176868) Strongylocentrotus purpuratus clone R3-31D9, WORK...    36   3.1    3

Homology SSA379 vs Protein

Sequences producing significant alignments:                      (bits) Value


CP002390_419(CP002390|pid:none) Filifactor alocis ATCC 35896, co...    37   0.47
CP002171_1615(CP002171|pid:none) Thermoanaerobacterium thermosac...    33   5.2
CP002108_447(CP002108|pid:none) Mycoplasma leachii PG50 clone MU...    32   8.8
FR668087_254(FR668087|pid:none) Mycoplasma leachii 99/014/6 comp...    32   8.8

Homology SSA379 vs Genome