Dictyostelium discoideum cDNA Clone SSA348

Size:		1046
3' sequence:	RY980414
5' sequence:	TM980718
Whole insert?:	Y
Accession #:	
Remarks:	*

Sequence SSA348

TGCACTCTGA AGAGAGTGAA CGTTCAAACA ATAACAACGA AGAATCTTGT
GTCTATTGTA GTTTAATGGG TTTTGGTCCA GCTTGGACAA TGTTTGTTTT
CGGTTTCTTT ATTCCAATGT GTTGGATCAT TGGTAGTTTC TATCTATTCT
CTCCAACTCG TGTCAAATGG GTAAGTGGTC TAATGAATTT CGTTGCTACC
ATCATCTTTA TTTTAGCTCT CTCTTTGATG ACTTTTTACG TTCCAGAATT
GGCTGCCCTT ATCATTGCTC CTGCTTTAAT TGTTATGGGT TTTGTAGTTT
GTATTCTAGT CGGTTTCTTT AGACAAAGAA ATAGAGAAAA GAAACGTTAT
CTCCGTGAAA GAATTAAGTT AATGCAAGCT GATGGTTATA AAAATTTGGC
TGACCATGTT AGTAGCTTTA GAGTTGATTA CAACCAACAT CAAGCAAAAG
CAAATAATAA TATGTTAAAG AAAAAGAAAA AGAGAATTCA AATGGAAAAA
TTAAATTCAC AAAGAAATTA TGGTGGTATT AACACAACTG ATAAAATAAA
TAATTCAAAT ATTAATAATA TTGGTATAAA TAATCCAAAT AATATTCAAA
ATAATCAAAT TAATAATATA TTAAATAATA GTAATAATAA TATTAATAAT
AATAATCAAG AAAGATTAAG TGACTCAAGT AAATCCTCAT TTATTGATGA
CTTTAAAAAA TCATCAAGTA ATAATCATAA GGATTTCCAT GAAATTCCAC
TTCAAGAGAT CATTCAAAGT ATTGGTATTA AGGGTAAAAA ACAATCATCA
TCATCTGCCA AAACAAGATC ACTCTCTTCA TCAAACTTGG TTAACTCTGT
AAATTCAAAT TTAGTAAATA GCACAAACTC AAATAATACA TCAATCTTAT
TAAAATCTCA TAATTCAAAT AGTCCTTTAT TTAATTCAAC TCCAACTCCA
ACTAATGTTG TATTTAATTC AATTGAAGTT TAAATGATTG AAAGAAAATG
AAAAAAATAA AAANAAAATA TATTTATACA TAAAAAAAAA AAAAAA

Translated Amino Acid Sequence SSA348

HSEESERSNNNNEESCVYCSLMGFGPAWTMFVFGFFIPMCWIIGSFYLFSPTRVKWVSGL
MNFVATIIFILALSLMTFYVPELAALIIAPALIVMGFVVCILVGFFRQRNREKKRYLRER
IKLMQADGYKNLADHVSSFRVDYNQHQAKANNNMLKKKKKRIQMEKLNSQRNYGGINTTD
KINNSNINNIGINNPNNIQNNQINNILNNSNNNINNNNQERLSDSSKSSFIDDFKKSSSN
NHKDFHEIPLQEIIQSIGIKGKKQSSSSAKTRSLSSSNLVNSVNSNLVNSTNSNNTSILL
KSHNSNSPLFNSTPTPTNVVFNSIEV*mierk*kk*kxnifihkkkkk

Homology SSA348 vs CSM-cDNA

Sequences producing significant alignments:                      (bits) Value


SSA348 (SSA348Q) /CSM/SS/SSA3-B/SSA348Q.Seq.d/                        894   0.0
SLA584 (SLA584Q) /CSM/SL/SLA5-D/SLA584Q.Seq.d/                        868   0.0
SFC584 (SFC584Q) /CSM/SF/SFC5-D/SFC584Q.Seq.d/                        779   0.0
SSG130 (SSG130Q) /CSM/SS/SSG1-B/SSG130Q.Seq.d/                        654   0.0
AHN423 (AHN423Q) /CSM/AH/AHN4-A/AHN423Q.Seq.d/                        628   e-179
VHQ172 (VHQ172Q) /CSM/VH/VHQ1-C/VHQ172Q.Seq.d/                        622   e-177
VHI774 (VHI774Q) /CSM/VH/VHI7-D/VHI774Q.Seq.d/                        622   e-177
VHE577 (VHE577Q) /CSM/VH/VHE5-D/VHE577Q.Seq.d/                        613   e-174
AHO854 (AHO854Q) /CSM/AH/AHO8-C/AHO854Q.Seq.d/                         42   0.017
AHN271 (AHN271Q) /CSM/AH/AHN2-C/AHN271Q.Seq.d/                         42   0.017

Homology SSA348 vs DNA

Sequences producing significant alignments:                  (bits) Value  N


(BJ446742) Dictyostelium discoideum cDNA clone:ddv63o17, 3' ...   622   0.0    4
(BJ355468) Dictyostelium discoideum cDNA clone:dda57n06, 3' ...   622   0.0    3
(AU060213) Dictyostelium discoideum slug cDNA, clone SLA584.      868   0.0    1
(BJ442076) Dictyostelium discoideum cDNA clone:ddv48d19, 3' ...   622   0.0    3
(BJ439559) Dictyostelium discoideum cDNA clone:ddv40i19, 3' ...   607   0.0    3
(BJ399640) Dictyostelium discoideum cDNA clone:dds6g21, 3' e...   749   0.0    2
(AU036983) Dictyostelium discoideum slug cDNA, clone SSA348.      660   0.0    1
(C83957) Dictyostelium discoideum slug cDNA, clone SLA584.        646   0.0    1
(AU072597) Dictyostelium discoideum slug cDNA, clone SSA348.      476   e-130  1
(AU073098) Dictyostelium discoideum slug cDNA, clone SSG130.      133   1e-30  2

Homology SSA348 vs Protein

Sequences producing significant alignments:                      (bits) Value


(Q54B29) RecName: Full=Uncharacterized membrane protein DDB_G029...   360   7e-98
CP001944_142(CP001944|pid:none) Encephalitozoon intestinalis ATC...    37   2.4

Homology SSA348 vs Genome