Homology SSA309 vs DNA
Query= SSA309 (SSA309Q) /CSM/SS/SSA3-A/SSA309Q.Seq.d/
(559 letters)
Database: ddbj_B
105,743,758 sequences; 104,622,809,269 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value N
(X61581) D.discoideum mRNA for profilin I. 791 0.0 1
(AU266795) Dictyostelium discoideum vegetative cDNA clone:VS... 791 0.0 1
(AU263678) Dictyostelium discoideum vegetative cDNA clone:VS... 791 0.0 1
(AU263677) Dictyostelium discoideum vegetative cDNA clone:VS... 791 0.0 1
(AU038214) Dictyostelium discoideum slug cDNA, clone SSH425. 791 0.0 1
(C94205) Dictyostelium discoideum slug cDNA, clone SSK539. 791 0.0 1
(C93272) Dictyostelium discoideum slug cDNA, clone SSM510. 791 0.0 1
(C93165) Dictyostelium discoideum slug cDNA, clone SSM730. 791 0.0 1
(C92845) Dictyostelium discoideum slug cDNA, clone SSF468. 791 0.0 1
(C92595) Dictyostelium discoideum slug cDNA, clone SSF170. 791 0.0 1
(C90334) Dictyostelium discoideum slug cDNA, clone SSI218. 791 0.0 1
(C90307) Dictyostelium discoideum slug cDNA, clone SSI784. 791 0.0 1
(C89615) Dictyostelium discoideum slug cDNA, clone SSA309. 791 0.0 1
(BJ440566) Dictyostelium discoideum cDNA clone:ddv44h05, 3' ... 791 0.0 1
(BJ425042) Dictyostelium discoideum cDNA clone:ddv54n09, 5' ... 791 0.0 1
(BJ421865) Dictyostelium discoideum cDNA clone:ddv44h05, 5' ... 791 0.0 1
(BJ417990) Dictyostelium discoideum cDNA clone:ddv31d09, 5' ... 791 0.0 1
(BJ335087) Dictyostelium discoideum cDNA clone:dda48k20, 5' ... 791 0.0 1
(BJ333917) Dictyostelium discoideum cDNA clone:dda44b15, 5' ... 791 0.0 1
(BJ333111) Dictyostelium discoideum cDNA clone:dda41a18, 5' ... 791 0.0 1
(AU038137) Dictyostelium discoideum slug cDNA, clone SSH318. 783 0.0 1
(BJ426079) Dictyostelium discoideum cDNA clone:ddv57g06, 5' ... 783 0.0 1
(C91982) Dictyostelium discoideum slug cDNA, clone SSC660. 777 0.0 1
(DL184438) Protein expression method. 757 0.0 1
(DL073162) Expression method of recombinant protein having t... 757 0.0 1
(BJ444660) Dictyostelium discoideum cDNA clone:ddv57g06, 3' ... 674 0.0 2
(DL184440) Protein expression method. 751 0.0 1
(DL073163) Expression method of recombinant protein having t... 751 0.0 1
(BJ436470) Dictyostelium discoideum cDNA clone:ddv31d09, 3' ... 749 0.0 1
(BJ337385) Dictyostelium discoideum cDNA clone:dda57b08, 5' ... 745 0.0 1
(AU266633) Dictyostelium discoideum vegetative cDNA clone:VS... 741 0.0 1
(BJ353071) Dictyostelium discoideum cDNA clone:dda48k20, 3' ... 706 0.0 3
(AU267369) Dictyostelium discoideum vegetative cDNA clone:VS... 728 0.0 1
(AU037375) Dictyostelium discoideum slug cDNA, clone SSD554. 716 0.0 1
(BJ355483) Dictyostelium discoideum cDNA clone:dda57b08, 3' ... 690 0.0 1
(BJ350934) Dictyostelium discoideum cDNA clone:dda41a18, 3' ... 624 e-175 1
(C94105) Dictyostelium discoideum slug cDNA, clone SSG414. 597 e-166 1
(C91071) Dictyostelium discoideum slug cDNA, clone SSJ448. 553 e-153 1
(BJ323653) Dictyostelium discoideum cDNA clone:dda11h15, 5' ... 553 e-153 1
(BJ351751) Dictyostelium discoideum cDNA clone:dda44b15, 3' ... 527 e-145 1
(BJ426767) Dictyostelium discoideum cDNA clone:ddv60n02, 5' ... 484 e-132 1
(BJ373608) Dictyostelium discoideum cDNA clone:ddc3k19, 3' e... 420 e-113 1
(C93994) Dictyostelium discoideum slug cDNA, clone SSK676. 412 e-111 1
(AU267368) Dictyostelium discoideum vegetative cDNA clone:VS... 365 1e-96 1
(BJ445649) Dictyostelium discoideum cDNA clone:ddv60n02, 3' ... 361 2e-95 1
(AU073216) Dictyostelium discoideum slug cDNA, clone SSG413. 337 3e-88 1
(AU038489) Dictyostelium discoideum slug cDNA, clone SSH782. 337 3e-88 1
(AU264912) Dictyostelium discoideum vegetative cDNA clone:VS... 188 2e-43 1
(AU264911) Dictyostelium discoideum vegetative cDNA clone:VS... 188 2e-43 1
(C94104) Dictyostelium discoideum slug cDNA, clone SSG413. 176 6e-40 1
(BJ443877) Dictyostelium discoideum cDNA clone:ddv54n09, 3' ... 80 1e-30 3
(BJ360031) Dictyostelium discoideum cDNA clone:ddc3k19, 5' e... 101 3e-17 1
(GE908302) 9551023_I05.ab1_c Past_norm2007 Porites astreoide... 38 0.28 2
(DU769553) APKG1510.g2 HF4000_12-21-03 uncultured marine mic... 48 0.37 1
(AJ542837) Equus caballus GSS, BAC clone CH241-100E10, SP6 e... 48 0.37 1
(AC226726) Solanum lycopersicum chromosome 6 clone C06HBa005... 46 1.5 1
(DL184447) Protein expression method. 46 1.5 1
(DL184444) Protein expression method. 46 1.5 1
(DL073188) Expression method of recombinant protein having t... 46 1.5 1
(DL073185) Expression method of recombinant protein having t... 46 1.5 1
(AC232864) Solanum lycopersicum chromosome 6 clone C06SLm010... 46 1.5 1
(AC080033) Homo sapiens chromosome 8, clone RP11-885J16, com... 38 1.5 2
(DQ311319) Bombyx mori tyrosine-protein phosphatase mRNA, co... 34 3.6 2
(BB989635) Bombyx mori cDNA, clone:E_ET_psgV_26H08_F_0, 5' e... 34 3.9 2
(BW800746) Branchiostoma floridae cDNA, larva clone:bflv019i... 40 4.1 2
(BW874798) Branchiostoma floridae cDNA, neurula clone:bfne11... 40 4.4 2
(EW766519) ST020013B20E07 Normalized and subtracted western ... 36 5.5 2
(DL184446) Protein expression method. 44 5.8 1
(DL073187) Expression method of recombinant protein having t... 44 5.8 1
(CU469123) Pig DNA sequence *** SEQUENCING IN PROGRESS *** f... 44 5.8 1
(CU468305) Pig DNA sequence *** SEQUENCING IN PROGRESS *** f... 44 5.8 1
(AP007746) Lotus japonicus genomic DNA, chromosome 1, clone:... 44 5.8 1
(AC223925) Bos taurus clone CH240-454D22, WORKING DRAFT SEQU... 44 5.8 1
(EW769566) ST020018B10A09 Normalized and subtracted western ... 36 6.0 2
(CB335283) Tc005B11R Tribolium castaneum embryonic cDNA libr... 38 6.4 2
(EW763721) ST020018B10D02 Normalized and subtracted western ... 36 6.5 2
(EW762553) ST020004A20B08 Normalized and subtracted western ... 36 7.6 2
(CB335466) Tc007A09R Tribolium castaneum embryonic cDNA libr... 38 8.6 2
(EW766242) ST020014A10G01 Normalized and subtracted western ... 36 8.7 2
(ES551555) TL2003H05SP6 TL2 Tribolium castaneum cDNA, mRNA s... 38 9.3 2
(CN497586) C03_02227.AB1 Diabrotica virgifera virgifera midg... 36 9.4 2
(ES548155) TF1013D03M13R TF1 Tribolium castaneum cDNA, mRNA ... 38 9.9 2
>(X61581) D.discoideum mRNA for profilin I.
Length = 521
Score = 791 bits (399), Expect = 0.0
Identities = 399/399 (100%)
Strand = Plus / Plus
Query: 11 aaaatgagctggcaacaatatgtcgatgaacaattaactggtgcaggactttctcaagga 70
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 33 aaaatgagctggcaacaatatgtcgatgaacaattaactggtgcaggactttctcaagga 92
Query: 71 gcaattttaggtgcaaatgatggtggtgtttgggctaaatcatcaggtattaatattact 130
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 93 gcaattttaggtgcaaatgatggtggtgtttgggctaaatcatcaggtattaatattact 152
Query: 131 aaaccagaaggtgatggtatagctgctttattcaaaaatccagctgaggtatttgctaag 190
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 153 aaaccagaaggtgatggtatagctgctttattcaaaaatccagctgaggtatttgctaag 212
Query: 191 ggtgctttgattggtggagtaaaatatatgggtattaagggtgacccacaaagtatctat 250
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 213 ggtgctttgattggtggagtaaaatatatgggtattaagggtgacccacaaagtatctat 272
Query: 251 ggtaaaaagggagcaactggttgtgttcttgttagaacaggccaagcaatcattgttggc 310
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 273 ggtaaaaagggagcaactggttgtgttcttgttagaacaggccaagcaatcattgttggc 332
Query: 311 atttatgatgataaagtccaaccaggatcagctgcacttattgttgaaaagttaggtgat 370
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 333 atttatgatgataaagtccaaccaggatcagctgcacttattgttgaaaagttaggtgat 392
Query: 371 tacttaagagataatggttattaagatattaatatcttg 409
|||||||||||||||||||||||||||||||||||||||
Sbjct: 393 tacttaagagataatggttattaagatattaatatcttg 431
Lambda K H
1.37 0.711 1.31
Matrix: blastn matrix:1 -3
Number of Sequences: 105743758
Number of Hits to DB: 462,322,305
Number of extensions: 24521902
Number of successful extensions: 1753408
Number of sequences better than 10.0: 82
Length of query: 559
Length of database: 104,622,809,269
Length adjustment: 23
Effective length of query: 536
Effective length of database: 102,190,702,835
Effective search space: 54774216719560
Effective search space used: 54774216719560
X1: 11 (21.8 bits)
S2: 22 (44.1 bits)
Dictyostelium discoideum cDNA Project Home