<List of Series> <Series: SSA2-C> <Clone: SSA256> <SEQ> <Translated> <CSM> <DNA> <Protein> <Genome> <PSORT> <MOTIF>
Dictyostelium discoideum cDNA Clone SSA256
Dictyostelium discoideum cDNA Project Home
Size: 0.8k
3' sequence: TS970607
5' sequence: -
Whole insert?: *
Accession #:
Remarks: *
Sequence SSA256
---------- GGCTCAAGGC AGTACAAACA ATGATTTAAC CTCAATAAAT
GGTCTTTCAA AGTTCCAAGT CTTACCAGGA GCTTTTCAAT GGGCAGTTGA
TGTTAAAATT GTCAACAAAG TTAATTCAAC TGCTGGTTCA TATGAAATGA
CCATTACTCC ATACCAAGTT GATAAGGTTG CTTGCAAAGA TGGTGATGAC
TTTGTTCAAT TGCCAATTCC AAAACTTACT CCACCAGATT CTGAAATTGT
TAGCCATTTA ACAGTTCGTC AAACACATAC ACCATATGAC TATGTTGTAA
ATGGAAGTGT TTACTTTAAA TACTCCCCAA CAACTGGCCA AGTTACAGTT
ATTAAAAAAG ATGAGACATT CCCAAAGAAT ATGACTGTTA CACAAGATGA
TAATACATCT TTCATCTTTA ACTTAAACTC TGAAAAATAA AACAATATGT
TTTTTTTTTC TCTTTAAGAA AACTTTAAAT AATAAAATTA TGAATTTCAG
AAAAAAAAAA AAA
Translated Amino Acid Sequence SSA256
<All Frames>
---AQGSTNNDLTSINGLSKFQVLPGAFQWAVDVKIVNKVNSTAGSYEMTITPYQVDKVA
CKDGDDFVQLPIPKLTPPDSEIVSHLTVRQTHTPYDYVVNGSVYFKYSPTTGQVTVIKKD
ETFPKNMTVTQDDNTSFIFNLNSEK*nnmfffsl*enfk**nyefqkkkk
Homology SSA256 vs CSM-cDNA
<more CSM info>
Sequences producing significant alignments: (bits) Value
VSC180 (VSC180Q) /CSM/VS/VSC1-D/VSC180Q.Seq.d/ 902 0.0
VSB653 (VSB653Q) /CSM/VS/VSB6-C/VSB653Q.Seq.d/ 902 0.0
SSM611 (SSM611Q) /CSM/SS/SSM6-A/SSM611Q.Seq.d/ 902 0.0
SSM310 (SSM310Q) /CSM/SS/SSM3-A/SSM310Q.Seq.d/ 902 0.0
SSK866 (SSK866Q) /CSM/SS/SSK8-C/SSK866Q.Seq.d/ 902 0.0
SSK494 (SSK494Q) /CSM/SS/SSK4-D/SSK494Q.Seq.d/ 902 0.0
SSJ652 (SSJ652Q) /CSM/SS/SSJ6-C/SSJ652Q.Seq.d/ 902 0.0
SSJ220 (SSJ220Q) /CSM/SS/SSJ2-A/SSJ220Q.Seq.d/ 902 0.0
SSI642 (SSI642Q) /CSM/SS/SSI6-B/SSI642Q.Seq.d/ 902 0.0
SSI186 (SSI186Q) /CSM/SS/SSI1-D/SSI186Q.Seq.d/ 902 0.0
Homology SSA256 vs DNA
<more DNA info>
Sequences producing significant alignments: (bits) Value N
(C90843) Dictyostelium discoideum slug cDNA, clone SSJ220. 866 0.0 2
(C91339) Dictyostelium discoideum slug cDNA, clone SSK494. 866 0.0 2
(C94348) Dictyostelium discoideum slug cDNA, clone SSK866. 866 0.0 2
(C91961) Dictyostelium discoideum slug cDNA, clone SSC587. 866 0.0 2
(C90176) Dictyostelium discoideum slug cDNA, clone SSI186. 866 0.0 2
(C91121) Dictyostelium discoideum slug cDNA, clone SSJ652. 866 0.0 2
(C93031) Dictyostelium discoideum slug cDNA, clone SSF496. 866 0.0 2
(C92927) Dictyostelium discoideum slug cDNA, clone SSF771. 866 0.0 2
(C92519) Dictyostelium discoideum slug cDNA, clone SSE517. 866 0.0 2
(C89786) Dictyostelium discoideum slug cDNA, clone SSG844. 866 0.0 2
Homology SSA256 vs Protein
<more Protein info>
Sequences producing significant alignments: (bits) Value
(P54657) RecName: Full=Calcium-dependent cell adhesion molecule ... 291 1e-77
U20997_1(U20997|pid:none) Dictyostelium discoideum putative 25 k... 251 8e-66
AC116551_17(AC116551|pid:none) Dictyostelium discoideum chromoso... 86 6e-16
AJ575138_1(AJ575138|pid:none) Sordaria macrospora app gene for a... 45 0.002
CP001719_962(CP001719|pid:none) Methanobrevibacter ruminantium M... 39 0.087
FN545234_29(FN545234|pid:none) Arsenophonus nasoniae whole genom... 35 1.6
FR874854_395(FR874854|pid:none) Lactobacillus pentosus IG1, anno... 34 2.8
(A4YIG5) RecName: Full=Cysteinyl-tRNA synthetase; EC=6.... 34 2.8
BA000026_784(BA000026|pid:none) Mycoplasma penetrans HF-2 DNA, c... 33 4.7
AE014187_521(AE014187|pid:none) Plasmodium falciparum 3D7 chromo... 33 6.2
Homology SSA256 vs Genome
<more Genome info>
<List of Series> <Series: SSA2-C> <Clone: SSA256> <SEQ> <Translated> <CSM> <DNA> <Protein> <Genome> <PSORT> <MOTIF>
Dictyostelium discoideum cDNA Project Home