Homology SSA173 vs Protein
Query= SSA173 (SSA173Q) /CSM/SS/SSA1-D/SSA173Q.Seq.d/
(550 letters)
Database: nrp_B
5,349,213 sequences; 1,732,582,204 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
FQ790344_129(FQ790344|pid:none) Botryotinia fuckeliana isolate T... 37 0.40
AL844509_243(AL844509|pid:none) Plasmodium falciparum 3D7 chromo... 37 0.40
HM222967_56(HM222967|pid:none) Chromera velia strain CCMP2878 ch... 37 0.51
AM295250_2354(AM295250|pid:none) Staphylococcus carnosus subsp. ... 36 1.2
AF396436_38(AF396436|pid:none) Tetrahymena thermophila strain SB... 35 1.5
CP001104_1092(CP001104|pid:none) Eubacterium eligens ATCC 27750,... 35 2.6
HE612856_540(HE612856|pid:none) Tetrapisispora phaffii CBS 4417 ... 33 5.7
CP000926_1782(CP000926|pid:none) Pseudomonas putida GB-1, comple... 33 5.8
AB573180_1(AB573180|pid:none) Rhodococcus erythropolis orfV, orf... 33 5.8
CP000716_1864(CP000716|pid:none) Thermosipho melanesiensis BI429... 33 7.5
CP000975_486(CP000975|pid:none) Methylacidiphilum infernorum V4,... 33 7.5
AK298723_1(AK298723|pid:none) Homo sapiens cDNA FLJ52016 complet... 33 7.5
AY890892_1(AY890892|pid:none) Synthetic construct Homo sapiens c... 33 7.5
AY890891_1(AY890891|pid:none) Synthetic construct Homo sapiens c... 33 7.5
FP236843_1210(FP236843|pid:none) Erwinia billingiae strain Eb661... 33 9.9
FQ312005_974(FQ312005|pid:none) Bacteriovorax marinus SJ genome. 33 9.9
AL445063_126(AL445063|pid:none) Thermoplasma acidophilum complet... 33 9.9
>FQ790344_129(FQ790344|pid:none) Botryotinia fuckeliana isolate T4
SuperContig_0_1 genomic supercontig, whole genome.
Length = 130
Score = 37.4 bits (85), Expect = 0.40
Identities = 25/78 (32%), Positives = 38/78 (48%)
Frame = +1
Query: 58 MSQSTAYIILNILVILAGCFITACGIYLFVNGLFHSIIGFVLGIYYLLAGVCIVLLEIVF 237
M S A+ ++N+ V G F+ GI F F SII +G Y ++ G+C LLE
Sbjct: 1 MDYSDAFRLVNLAV---GVFMVLGGISQFFPLGFQSII---IGCYVIIFGICTALLEFQI 54
Query: 238 PQKLVNLFGFYTYWFGKG 291
P ++ F + G+G
Sbjct: 55 PPQVSRYASFLFSFVGRG 72
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 5349213
Number of Hits to DB: 1,166,666,918
Number of extensions: 23819310
Number of successful extensions: 65714
Number of sequences better than 10.0: 18
Number of HSP's gapped: 65549
Number of HSP's successfully gapped: 19
Length of query: 183
Length of database: 1,732,582,204
Length adjustment: 124
Effective length of query: 59
Effective length of database: 1,069,279,792
Effective search space: 63087507728
Effective search space used: 63087507728
Neighboring words threshold: 12
Window for multiple hits: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
S2: 30 (16.2 bits)
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