Homology SSA173 vs Protein

Query= SSA173 (SSA173Q) /CSM/SS/SSA1-D/SSA173Q.Seq.d/
         (550 letters)

Database: nrp_B
           5,349,213 sequences; 1,732,582,204 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

FQ790344_129(FQ790344|pid:none) Botryotinia fuckeliana isolate T...    37   0.40
AL844509_243(AL844509|pid:none) Plasmodium falciparum 3D7 chromo...    37   0.40
HM222967_56(HM222967|pid:none) Chromera velia strain CCMP2878 ch...    37   0.51
AM295250_2354(AM295250|pid:none) Staphylococcus carnosus subsp. ...    36   1.2
AF396436_38(AF396436|pid:none) Tetrahymena thermophila strain SB...    35   1.5
CP001104_1092(CP001104|pid:none) Eubacterium eligens ATCC 27750,...    35   2.6
HE612856_540(HE612856|pid:none) Tetrapisispora phaffii CBS 4417 ...    33   5.7
CP000926_1782(CP000926|pid:none) Pseudomonas putida GB-1, comple...    33   5.8
AB573180_1(AB573180|pid:none) Rhodococcus erythropolis orfV, orf...    33   5.8
CP000716_1864(CP000716|pid:none) Thermosipho melanesiensis BI429...    33   7.5
CP000975_486(CP000975|pid:none) Methylacidiphilum infernorum V4,...    33   7.5
AK298723_1(AK298723|pid:none) Homo sapiens cDNA FLJ52016 complet...    33   7.5
AY890892_1(AY890892|pid:none) Synthetic construct Homo sapiens c...    33   7.5
AY890891_1(AY890891|pid:none) Synthetic construct Homo sapiens c...    33   7.5
FP236843_1210(FP236843|pid:none) Erwinia billingiae strain Eb661...    33   9.9
FQ312005_974(FQ312005|pid:none) Bacteriovorax marinus SJ genome.       33   9.9
AL445063_126(AL445063|pid:none) Thermoplasma acidophilum complet...    33   9.9

>FQ790344_129(FQ790344|pid:none) Botryotinia fuckeliana isolate T4
           SuperContig_0_1 genomic supercontig, whole genome.
          Length = 130

 Score = 37.4 bits (85), Expect = 0.40
 Identities = 25/78 (32%), Positives = 38/78 (48%)
 Frame = +1

Query: 58  MSQSTAYIILNILVILAGCFITACGIYLFVNGLFHSIIGFVLGIYYLLAGVCIVLLEIVF 237
           M  S A+ ++N+ V   G F+   GI  F    F SII   +G Y ++ G+C  LLE
Sbjct: 1   MDYSDAFRLVNLAV---GVFMVLGGISQFFPLGFQSII---IGCYVIIFGICTALLEFQI 54

Query: 238 PQKLVNLFGFYTYWFGKG 291
           P ++     F   + G+G
Sbjct: 55  PPQVSRYASFLFSFVGRG 72

Lambda     K      H
   0.318    0.134    0.401

Gapped
Lambda     K      H
   0.267   0.0410    0.140

Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 5349213
Number of Hits to DB: 1,166,666,918
Number of extensions: 23819310
Number of successful extensions: 65714
Number of sequences better than 10.0: 18
Number of HSP's gapped: 65549
Number of HSP's successfully gapped: 19
Length of query: 183
Length of database: 1,732,582,204
Length adjustment: 124
Effective length of query: 59
Effective length of database: 1,069,279,792
Effective search space: 63087507728
Effective search space used: 63087507728
Neighboring words threshold: 12
Window for multiple hits: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
S2: 30 (16.2 bits)




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