Dictyostelium discoideum cDNA Clone SSA173

Size:		0.7k
3' sequence:	*
5' sequence:	TM961114
Whole insert?:	*
Accession #:	
Remarks:	*

Sequence SSA173

AAAAAAAAAA ACAAATAAAG AAATAAAGAA ATAAAAAAAA AAAAGAAACT
TTAAAAAATG AGCCAATCAA CTGCATATAT TATTTTAAAT ATTTTAGTTA
TTTTAGCTGG TTGTTTTATA ACAGCATGTG GTATTTATTT ATTCGTTAAT
GGTTTATTCC ATAGTATTAT TGGATTTGTA CTTGGTATTT ATTATCTTTT
GGCTGGTGTT TGTATTGTAC TCCTCGAAAT CGTCTTCCCA CAAAAATTAG
TAAATCTTTT TGGTTTTTAT ACATATTGGT TTGGTAAAGG TGCTCTTATT
TCTTTAATTG GTTTATTAAT CCTTGGAAAT AGTGGATTCT TTTTAGCAGC
TGGTATTATT GTAATTGCCG TTGGTATTGT TTGTATGATT TTCCATTTCC
TTTTAGGTTG TCCACGTCCA TTAATAAATC GTAGTGTTGA AAGAAAACCA
GAACCACAAG GTCAACATGC TTAATCAATT TTTTTAATTA CTTTTNTAAA
AAAAAAAAAA AAAAAAAAAA AAAGAAACAA GTCAGTTTTG ----------

Translated Amino Acid Sequence SSA173

kkknk*rnkeikkkkkl*KMSQSTAYIILNILVILAGCFITACGIYLFVNGLFHSIIGFV
LGIYYLLAGVCIVLLEIVFPQKLVNLFGFYTYWFGKGALISLIGLLILGNSGFFLAAGII
VIAVGIVCMIFHFLLGCPRPLINRSVERKPEPQGQHA*siflitfxkkkkkkkkrnksv-
--

Homology SSA173 vs CSM-cDNA

Sequences producing significant alignments:                      (bits) Value


SSM468 (SSM468Q) /CSM/SS/SSM4-C/SSM468Q.Seq.d/                        860   0.0
SSH880 (SSH880Q) /CSM/SS/SSH8-D/SSH880Q.Seq.d/                        860   0.0
SSF216 (SSF216Q) /CSM/SS/SSF2-A/SSF216Q.Seq.d/                        860   0.0
SSE815 (SSE815Q) /CSM/SS/SSE8-A/SSE815Q.Seq.d/                        860   0.0
SSE703 (SSE703Q) /CSM/SS/SSE7-A/SSE703Q.Seq.d/                        860   0.0
SSD170 (SSD170Q) /CSM/SS/SSD1-C/SSD170Q.Seq.d/                        860   0.0
SSC852 (SSC852Q) /CSM/SS/SSC8-C/SSC852Q.Seq.d/                        860   0.0
SSA173 (SSA173Q) /CSM/SS/SSA1-D/SSA173Q.Seq.d/                        860   0.0
SSH447 (SSH447Q) /CSM/SS/SSH4-B/SSH447Q.Seq.d/                        833   0.0
VSJ440 (VSJ440Q) /CSM/VS/VSJ4-B/VSJ440Q.Seq.d/                        823   0.0

Homology SSA173 vs DNA

Sequences producing significant alignments:                  (bits) Value  N


(AU076320) Dictyostelium discoideum slug cDNA, clone SSA173.      866   0.0    2
(M19416) Slime mold (D.discoideum) membrane protein P8A7 mRN...   866   0.0    1
(AU039167) Dictyostelium discoideum slug cDNA, clone SSM468.      866   0.0    1
(AU038570) Dictyostelium discoideum slug cDNA, clone SSH880.      866   0.0    1
(AU038231) Dictyostelium discoideum slug cDNA, clone SSH447.      866   0.0    1
(C93954) Dictyostelium discoideum slug cDNA, clone SSC852.        866   0.0    1
(AU269920) Dictyostelium discoideum vegetative cDNA clone:VS...   716   0.0    2
(X51947) Dictyostelium discoideum P8A7 gene.                      490   0.0    2
(C90655) Dictyostelium discoideum slug cDNA, clone SSI879.        797   0.0    1
(C92518) Dictyostelium discoideum slug cDNA, clone SSE515.        771   0.0    1

Homology SSA173 vs Protein

Sequences producing significant alignments:                      (bits) Value


FQ790344_129(FQ790344|pid:none) Botryotinia fuckeliana isolate T...    37   0.40
AL844509_243(AL844509|pid:none) Plasmodium falciparum 3D7 chromo...    37   0.40
HM222967_56(HM222967|pid:none) Chromera velia strain CCMP2878 ch...    37   0.51
AM295250_2354(AM295250|pid:none) Staphylococcus carnosus subsp. ...    36   1.2
AF396436_38(AF396436|pid:none) Tetrahymena thermophila strain SB...    35   1.5
CP001104_1092(CP001104|pid:none) Eubacterium eligens ATCC 27750,...    35   2.6
HE612856_540(HE612856|pid:none) Tetrapisispora phaffii CBS 4417 ...    33   5.7
CP000926_1782(CP000926|pid:none) Pseudomonas putida GB-1, comple...    33   5.8
AB573180_1(AB573180|pid:none) Rhodococcus erythropolis orfV, orf...    33   5.8
CP000716_1864(CP000716|pid:none) Thermosipho melanesiensis BI429...    33   7.5

Homology SSA173 vs Genome