Dictyostelium discoideum cDNA Clone SLJ531

Size:		1.2k
3' sequence:	TS980908
5' sequence:	TS990202
Whole insert?:	*
Accession #:	
Remarks:	*

Sequence SLJ531

CCCACGCGTC CGATCATATA TTCATTCGAT CTCTTAATAT ATATTTTCAA
AATAACATAA AATAAAAATA AAAATAAAAA TAAAAATAAA AATAATGAAA
TCAATAATAT CAAATATAAA TAATATAGAT AATAATCATT TAGCAGGAGG
TGCATTAGCA TTATGGTTTA TATTAAATAT TAGTACATTA ATATTAAATA
AATATATTTA TTCATCATTG TATTTCTATT ATCCTATAAC ATTGACGGCG
ATACATATGT TTGTATGTTG GATTGGAAGT GTGGCAGTAT TGCGAGTATA
TAAATTGATA CCATTGATAA CGGTACAATG GAGTGGTAAA CAATTTATAA
ATATAATGAT T--------- -TTCACCTTT TTAGTCATTA AATTAACTTC
ACCTTTAACC TACACCGTAT CTGGTAATCT TAAAGTGGTC CTAAGTATTT
CAATCTCAAT TTTAGTCTTT AAAAATGAAA CAAACTTTTT CAATGTTTTA
GGTTGTGCCA TAGCTATCAT GGGTGTAGTT TGTTATAGTA ACATTAAATA
TGAAGAATCA AAAGCAAAAT TAGAACAACA ACAACAACAA TCTTTAAAAC
AATTAGAATC AATTTATGAA GAGAAATTAG ATAAAGAATC TTTATTATCT
AAATAAATAA ATAAAATTAA AAATAAAAGA TTGTATAAAA A

Translated Amino Acid Sequence SLJ531

prvrsyihsis*yifsk*HKIKIKIKIKIKIMKSIISNINNIDNNHLAGGALALWFILNI
STLILNKYIYSSLYFYYPITLTAIHMFVCWIGSVAVLRVYKLIPLITVQWSGKQFINIMI
---

---FTFLVIKLTSPLTYTVSGNLKVVLSISISILVFKNETNFFNVLGCAIAIMGVVCYSN
IKYEESKAKLEQQQQQSLKQLESIYEEKLDKESLLSK*inkiknkrlyk

Homology SLJ531 vs CSM-cDNA

Sequences producing significant alignments:                      (bits) Value


SLJ531 (SLJ531Q) /CSM/SL/SLJ5-B/SLJ531Q.Seq.d/                        807   0.0
SFL387 (SFL387Q) /CSM/SF/SFL3-D/SFL387Q.Seq.d/                        446   e-124
SFK558 (SFK558Q) /CSM/SF/SFK5-C/SFK558Q.Seq.d/                        446   e-124
SFK354 (SFK354Q) /CSM/SF/SFK3-C/SFK354Q.Seq.d/                        446   e-124
SFK342 (SFK342Q) /CSM/SF/SFK3-B/SFK342Q.Seq.d/                        446   e-124
CHC130 (CHC130Q) /CSM/CH/CHC1-B/CHC130Q.Seq.d/                        446   e-124
CHA607 (CHA607Q) /CSM/CH/CHA6-A/CHA607Q.Seq.d/                        446   e-124
CFH704 (CFH704Q) /CSM/CF/CFH7-A/CFH704Q.Seq.d/                        446   e-124
CFH255 (CFH255Q) /CSM/CF/CFH2-C/CFH255Q.Seq.d/                        446   e-124
CFH204 (CFH204Q) /CSM/CF/CFH2-A/CFH204Q.Seq.d/                        446   e-124

Homology SLJ531 vs DNA

Sequences producing significant alignments:                  (bits) Value  N


(BJ376736) Dictyostelium discoideum cDNA clone:ddc29p18, 3' ...   400   e-136  2
(AU053709) Dictyostelium discoideum slug cDNA, clone SLJ531.      400   e-136  2
(BJ401213) Dictyostelium discoideum cDNA clone:dds22c15, 3' ...   400   e-130  3
(BJ372943) Dictyostelium discoideum cDNA clone:ddc15g02, 3' ...   400   e-130  3
(BJ340770) Dictyostelium discoideum cDNA clone:dda3e21, 3' e...   400   e-130  3
(BJ346499) Dictyostelium discoideum cDNA clone:dda24j06, 3' ...   400   e-128  2
(BJ377908) Dictyostelium discoideum cDNA clone:ddc26k07, 3' ...   400   e-128  2
(BJ372164) Dictyostelium discoideum cDNA clone:ddc11c18, 3' ...   400   e-128  3
(BJ372540) Dictyostelium discoideum cDNA clone:ddc13f04, 3' ...   400   e-125  3
(BJ401642) Dictyostelium discoideum cDNA clone:dds23n21, 3' ...   400   e-125  3

Homology SLJ531 vs Protein

Sequences producing significant alignments:                      (bits) Value


AP008211_130(AP008211|pid:none) Oryza sativa (japonica cultivar-...    55   2e-06
AC149472_18(AC149472|pid:none) Medicago truncatula clone mth2-77...    55   2e-06
FB888592_1(FB888592|pid:none) Sequence 107865 from Patent WO2008...    55   3e-06
(Q5XF09) RecName: Full=Probable sugar phosphate/phosphate transl...    55   4e-06
FB888588_1(FB888588|pid:none) Sequence 107861 from Patent WO2008...    55   4e-06
FB803930_1(FB803930|pid:none) Sequence 23203 from Patent WO20080...    55   4e-06
AM481310_3(AM481310|pid:none) Vitis vinifera contig VV78X248272....    55   4e-06
JA212827_1(JA212827|pid:none) Sequence 115 from Patent EP2311856...    55   4e-06
(Q9C521) RecName: Full=UDP-galactose transporter 1;          Sho...    54   5e-06
FB803906_1(FB803906|pid:none) Sequence 23179 from Patent WO20080...    54   5e-06

Homology SLJ531 vs Genome