Dictyostelium discoideum cDNA Clone SLJ101

Size:		1.3k
3' sequence:	TS981021
5' sequence:	TS990202
Whole insert?:	*
Accession #:	
Remarks:	*

Sequence SLJ101

GAGAAGATTT CATACGATTC AATCATTTTT AGATTCGATA GCATCAAGTG
ATGTAATTAA GGAACAAACT TCAAAGTGGG GTCTATCATT TCAATCTCCA
CTAGAGGTAA TTGCAAGTCA ATTTCAACCA CCAATGAAGG ATATACCACG
TTATAAAAAG TTGAAAGATA TTTGG----- -----TTACA ACAATTAACA
TTCAATTTAT GTTTTCTTTA TTTCAATTTT GATCAAGCAG TTTCTGTACC
AATGGTATGC CAATACTCTC ATAAAAGTGC ACTTTTATGT GGTAAATCTT
TAAATGCTAC TACTCCAGNT GAAATGAGTA ATCATTTATT CTTTTTATAA
AAAAAAAAAA AAAAAAAAAA AAAAAAAAAA CAAACAAAAA AA

Translated Amino Acid Sequence SLJ101

RRFHTIQSFLDSIASSDVIKEQTSKWGLSFQSPLEVIASQFQPPMKDIPRYKKLKDIW--
-

---LQQLTFNLCFLYFNFDQAVSVPMVCQYSHKSALLCGKSLNATTPXEMSNHLFFL*kk
kkkkkkkkqtkk

Homology SLJ101 vs CSM-cDNA

Sequences producing significant alignments:                      (bits) Value


SLJ101 (SLJ101Q) /CSM/SL/SLJ1-A/SLJ101Q.Seq.d/                        624   e-178
SLG496 (SLG496Q) /CSM/SL/SLG4-D/SLG496Q.Seq.d/                        347   8e-95
SSL496 (SSL496Q) /CSM/SS/SSL4-D/SSL496Q.Seq.d/                         38   0.096
SSL122 (SSL122Q) /CSM/SS/SSL1-A/SSL122Q.Seq.d/                         38   0.096
SSH205 (SSH205Q) /CSM/SS/SSH2-A/SSH205Q.Seq.d/                         38   0.096
SSH126 (SSH126Q) /CSM/SS/SSH1-B/SSH126Q.Seq.d/                         38   0.096
SSG547 (SSG547Q) /CSM/SS/SSG5-B/SSG547Q.Seq.d/                         38   0.096
SSF744 (SSF744Q) /CSM/SS/SSF7-B/SSF744Q.Seq.d/                         38   0.096
SSF684 (SSF684Q) /CSM/SS/SSF6-D/SSF684Q.Seq.d/                         38   0.096
SSF421 (SSF421Q) /CSM/SS/SSF4-A/SSF421Q.Seq.d/                         38   0.096

Homology SLJ101 vs DNA

Sequences producing significant alignments:                  (bits) Value  N


(AC115682) Dictyostelium discoideum chromosome 2 map 4101105...   343   e-176  2
(AU061893) Dictyostelium discoideum slug cDNA, clone SLG496.      343   3e-90  1
(AU060297) Dictyostelium discoideum slug cDNA, clone SLJ101.      343   3e-90  1
(AU053554) Dictyostelium discoideum slug cDNA, clone SLJ101.      317   2e-82  1
(AU039817) Dictyostelium discoideum slug cDNA, clone SLG496.      317   2e-82  1
(AC084510) Caenorhabditis briggsae cosmid G16C24, complete s...    48   0.26   1
(AC118416) Rattus norvegicus clone CH230-260M4, *** SEQUENCI...    48   0.26   1
(AC126586) Rattus norvegicus clone CH230-237A8, WORKING DRAF...    46   1.0    1
(AC118866) Rattus norvegicus clone CH230-339A11, *** SEQUENC...    46   1.0    1
(AC224573) Bos taurus clone CH240-481D11, WORKING DRAFT SEQU...    46   1.0    1

Homology SLJ101 vs Protein

Sequences producing significant alignments:                      (bits) Value


(Q7Z3Z4) RecName: Full=Piwi-like protein 4;  &AB590313_1(AB59031...    61   2e-08
AB079366_1(AB079366|pid:none) Homo sapiens PIWIL1 mRNA, complete...    61   2e-08
AK096837_1(AK096837|pid:none) Homo sapiens cDNA FLJ39518 fis, cl...    61   2e-08
AC116924_18(AC116924|pid:none) Dictyostelium discoideum chromoso...    60   4e-08
(Q8CGT6) RecName: Full=Piwi-like protein 4;          Short=mAgo5...    59   7e-08
AY135692_1(AY135692|pid:none) Mus musculus Miwi 2 protein (Miwi2...    59   7e-08
GU076092_1(GU076092|pid:none) Saccoglossus kowalevskii piwi-like...    59   9e-08
AM942741_1(AM942741|pid:none) Isodiametra pulchra mRNA for piwi-...    58   1e-07
AB258534_1(AB258534|pid:none) Mus musculus piwiL4 mRNA for PiwiL...    57   3e-07
EU413991_1(EU413991|pid:none) Oryzias latipes piwi-like protein ...    56   6e-07

Homology SLJ101 vs Genome