Dictyostelium discoideum cDNA Clone SLI570

Size:		1.4k
3' sequence:	TS980823
5' sequence:	*
Whole insert?:	*
Accession #:	
Remarks:	*

Sequence SLI570

---------- ATTACCAGAC GGTCAAGTCA TCACCATCGG TAATGAACGT
TTCCGTTGCC CAGAAGCCCT CTTCCAACCA TCATTCTTAG GTATGGAATC
AGCTGGTATC CACGAAACCA CCTATAACTC CATCATGAAA TGTGATGTTG
ATATCCGTAA AGATTTATAC GGTAATGTCG TCTTATCTGG TGGTACAACT
ATGTTCCCAG GTATTGCTGA TCGTATGAAC AAAGAATTAA CTGCTTTAGC
CCCATCAACC ATGAAAATTA AAATCATTGC TCCACCAGAA CGTAAATACT
CTGTCTGGAT TGGTGGATCT ATCTTAGCTT CACTCTCAAC TTTCCAACAA
ATGTGGATCT CCAAAGAAGA ATACGACGAA TCAGGTCCAT CAATTGTCCA
CAGAAAATGT TTCTAAACAA TTAAAACTAG TGATGAAAGT GCTTCTCACA
AATATTTATG TAAAATATAT AATAAAATAC ATTTAATATT TTTAGGTTTT
GTTTAGTTGT TGATCTTTAT CCGACTATTT AAAATCTAAA TAATAATTTG
TAA

Translated Amino Acid Sequence SLI570

---LPDGQVITIGNERFRCPEALFQPSFLGMESAGIHETTYNSIMKCDVDIRKDLYGNVV
LSGGTTMFPGIADRMNKELTALAPSTMKIKIIAPPERKYSVWIGGSILASLSTFQQMWIS
KEEYDESGPSIVHRKCF*tiktsdesashkylckiynkihliflgfv*llifirlfki*i
iic

Homology SLI570 vs CSM-cDNA

Sequences producing significant alignments:                      (bits) Value


SLI570 (SLI570Q) /CSM/SL/SLI5-C/SLI570Q.Seq.d/                       1076   0.0
SLE773 (SLE773Q) /CSM/SL/SLE7-D/SLE773Q.Seq.d/                       1076   0.0
SLA822 (SLA822Q) /CSM/SL/SLA8-A/SLA822Q.Seq.d/                       1076   0.0
VFH871 (VFH871Q) /CSM/VF/VFH8-C/VFH871Q.Seq.d/                       1041   0.0
VFG355 (VFG355Q) /CSM/VF/VFG3-C/VFG355Q.Seq.d/                       1041   0.0
VFH614 (VFH614Q) /CSM/VF/VFH6-A/VFH614Q.Seq.d/                       1035   0.0
AFB472 (AFB472Q) /CSM/AF/AFB4-C/AFB472Q.Seq.d/                       1035   0.0
VFL590 (VFL590Q) /CSM/VF/VFL5-D/VFL590Q.Seq.d/                       1029   0.0
SFJ706 (SFJ706Q) /CSM/SF/SFJ7-A/SFJ706Q.Seq.d/                       1023   0.0
CFC667 (CFC667Q) /CSM/CF/CFC6-C/CFC667Q.Seq.d/                       1023   0.0

Homology SLI570 vs DNA

Sequences producing significant alignments:                  (bits) Value  N


(AC116957) Dictyostelium discoideum chromosome 2 map 1685067...  1076   0.0    1
(AU053403) Dictyostelium discoideum slug cDNA, clone SLI570.     1076   0.0    1
(AU039573) Dictyostelium discoideum slug cDNA, clone SLE773.     1076   0.0    1
(AU033435) Dictyostelium discoideum slug cDNA, clone SLA822.     1076   0.0    1
(BJ434376) Dictyostelium discoideum cDNA clone:ddv16n18, 3' ...   991   0.0    2
(BJ431301) Dictyostelium discoideum cDNA clone:ddv13n13, 3' ...   991   0.0    2
(BJ434185) Dictyostelium discoideum cDNA clone:ddv16k04, 3' ...   991   0.0    2
(BJ340762) Dictyostelium discoideum cDNA clone:dda3p18, 3' e...   991   0.0    2
(BJ434722) Dictyostelium discoideum cDNA clone:ddv24c23, 3' ...   991   0.0    2
(BJ402010) Dictyostelium discoideum cDNA clone:dds20l01, 3' ...   983   0.0    2

Homology SLI570 vs Protein

Sequences producing significant alignments:                      (bits) Value


(Q54H30) RecName: Full=Major actin; AltName: Full=Actin A1; AltN...   275   7e-73
ATDO(A93223;A92871;S67999;A03004)actin - slime mold (Dictyosteli...   275   7e-73
X03282_1(X03282|pid:none) dictyostelium discoideum gene for acti...   275   7e-73
B23412(B23412)actin 12 - slime mold (Dictyostelium discoideum)        275   7e-73
(P02576) RecName: Full=Actin, plasmodial isoform;  &ATFY(A29044;...   273   3e-72
(Q553U6) RecName: Full=Putative actin-22;  &AC116305_3(AC116305|...   272   6e-72
AK369759_1(AK369759|pid:none) Hordeum vulgare subsp. vulgare mRN...   272   6e-72
AF508263_1(AF508263|pid:none) Pyrocystis lunula actin mRNA, comp...   270   3e-71
(P02578) RecName: Full=Actin-1;  &ATAX(A92886;A03004) &V00002_1(...   270   4e-71
(P07829) RecName: Full=Actin-3; AltName: Full=Actin-3-sub 1;          270   4e-71

Homology SLI570 vs Genome