Dictyostelium discoideum cDNA Clone SLH858

Size:		1.3k
3' sequence:	TM980714
5' sequence:	*
Whole insert?:	*
Accession #:	
Remarks:	*

Sequence SLH858

---------- ATGTTCAGTC GTCCGTGTCA TTGCTCACAC TCAAGTTCAC
AAATTAAAAT TACTCAAAAG AAAGCACACG TCCTTGAAAT CCAAGTCAAT
GGTGGTTCAA TCGTCGAAAA AGTTAACTTT GCTGTTGCCA ACTTTGAAAA
GACCGTCAAC GTCACTGGTG TCTTTGCCGA AAATGAATTA ATCGATGTTA
TCGGTGTAAC CAAAGGTAAA GGTTTCAATG GTGTCATTAA AAGATGGGGT
GTCCGTAAAT TACCAAGAAA GACCCATAAA GGTTTAAGAA AGGTTGCCTG
TATTGGTGCA TGGCATCCAT CCCGTGTTAG TACCACCGTC CCAAGAGCTG
GTCAACTCGG TTACCATCAT CGTGTCGAAA GAAACAAGAA GATTTACAGA
ATCGGTCAAG CTCAACCAGA AGACGGTAAA CAAATCTCAA CCGGTAAGAC
TGAATTCGAT TTAACTGAAA AGACTATCAA TCCAATGGGT GGTTTCGCTC
ACTACGGTAT GGTTAAACAT GAATTCTTAA TGCTTAAAGG TTGTGTTGCT
GGTCCAAGAA AGAGAGCCTT AACCTTAAGA AAGAGTATCA CCACTCAAAC
TGGTCGTGCT GCCCTCGAGA AAATCACTCT CAAATTCATC GATACCTCCA
GCAAGTTTGG TCACGGTCTT CATCAAACCG CTGAAGATAA GACTAAATAT
TTCGGCGTCA AGAAATCAAG ATCAACTAAG GCTTAAATTC AATAAATTAG
ATTTCAGAGA GTTATCAAAC ATAAA

Translated Amino Acid Sequence SLH858

---FSRPCHCSHSSSQIKITQKKAHVLEIQVNGGSIVEKVNFAVANFEKTVNVTGVFAEN
ELIDVIGVTKGKGFNGVIKRWGVRKLPRKTHKGLRKVACIGAWHPSRVSTTVPRAGQLGY
HHRVERNKKIYRIGQAQPEDGKQISTGKTEFDLTEKTINPMGGFAHYGMVKHEFLMLKGC
VAGPRKRALTLRKSITTQTGRAALEKITLKFIDTSSKFGHGLHQTAEDKTKYFGVKKSRS
TKA*iq*irfqrvikhk

Homology SLH858 vs CSM-cDNA

Sequences producing significant alignments:                      (bits) Value


SLH858 (SLH858Q) /CSM/SL/SLH8-C/SLH858Q.Seq.d/                       1516   0.0
VFC683 (VFC683Q) /CSM/VF/VFC6-D/VFC683Q.Seq.d/                       1499   0.0
VFF417 (VFF417Q) /CSM/VF/VFF4-A/VFF417Q.Seq.d/                       1495   0.0
VFC883 (VFC883Q) /CSM/VF/VFC8-D/VFC883Q.Seq.d/                       1495   0.0
VFF634 (VFF634Q) /CSM/VF/VFF6-B/VFF634Q.Seq.d/                       1487   0.0
VFL835 (VFL835Q) /CSM/VF/VFL8-B/VFL835Q.Seq.d/                       1473   0.0
VFI645 (VFI645Q) /CSM/VF/VFI6-B/VFI645Q.Seq.d/                       1473   0.0
VFH886 (VFH886Q) /CSM/VF/VFH8-D/VFH886Q.Seq.d/                       1473   0.0
VFA284 (VFA284Q) /CSM/VF/VFA2-D/VFA284Q.Seq.d/                       1471   0.0
VFJ264 (VFJ264Q) /CSM/VF/VFJ2-C/VFJ264Q.Seq.d/                       1469   0.0

Homology SLH858 vs DNA

Sequences producing significant alignments:                  (bits) Value  N


(AU039476) Dictyostelium discoideum slug cDNA, clone SLH858.     1516   0.0    1
(AU040016) Dictyostelium discoideum slug cDNA, clone SLH448.     1415   0.0    1
(AU034186) Dictyostelium discoideum slug cDNA, clone SLC234.     1415   0.0    1
(AU034183) Dictyostelium discoideum slug cDNA, clone SLC231.     1413   0.0    1
(AU052238) Dictyostelium discoideum slug cDNA, clone SLA404.     1411   0.0    1
(AU034755) Dictyostelium discoideum slug cDNA, clone SLE279.     1411   0.0    2
(BJ430310) Dictyostelium discoideum cDNA clone:ddv6e22, 3' e...  1411   0.0    1
(BJ434453) Dictyostelium discoideum cDNA clone:ddv16l22, 3' ...  1407   0.0    2
(BJ433817) Dictyostelium discoideum cDNA clone:ddv23d02, 3' ...  1407   0.0    1
(BJ430314) Dictyostelium discoideum cDNA clone:ddv6f22, 3' e...  1407   0.0    1

Homology SLH858 vs Protein

Sequences producing significant alignments:                      (bits) Value


(P34113) RecName: Full=60S ribosomal protein L3;  &JC4254(JC4254...   457   e-132
AY395739_1(AY395739|pid:none) Nicotiana tabacum ribosomal protei...   292   6e-81
DQ241849_1(DQ241849|pid:none) Solanum tuberosum clone 187E04 rib...   295   6e-81
EF070522_1(EF070522|pid:none) Maconellicoccus hirsutus clone WHM...   295   1e-80
BT034517_1(BT034517|pid:none) Zea mays full-length cDNA clone ZM...   292   1e-80
BT036034_1(BT036034|pid:none) Zea mays full-length cDNA clone ZM...   292   1e-80
AM452874_1(AM452874|pid:none) Vitis vinifera contig VV78X187512....   290   1e-80
AM471157_1(AM471157|pid:none) Vitis vinifera contig VV78X211407....   292   2e-80
BT070643_1(BT070643|pid:none) Picea sitchensis clone WS02742_A15...   295   4e-80
BC158279_1(BC158279|pid:none) Xenopus tropicalis hypothetical pr...   294   4e-80

Homology SLH858 vs Genome