Homology SLH727 vs Protein
Query= SLH727 (SLH727Q) /CSM/SL/SLH7-B/SLH727Q.Seq.d/
(1283 letters)
Database: nrp_B
5,349,213 sequences; 1,732,582,204 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
(P0CR38) RecName: Full=Protein transport protein SEC23; &(P0CR3... 388 e-106
FQ311452_185(FQ311452|pid:none) Sporisorium reilianum SRZ2 chrom... 383 e-104
(Q4PE39) RecName: Full=Protein transport protein SEC23; 383 e-104
CR860755_1(CR860755|pid:none) Pongo abelii mRNA; cDNA DKFZp459O1... 366 1e-99
(Q15436) RecName: Full=Protein transport protein Sec23A; AltName... 366 1e-99
AK312259_1(AK312259|pid:none) Homo sapiens cDNA, FLJ92554, Homo ... 366 1e-99
AK127355_1(AK127355|pid:none) Homo sapiens cDNA FLJ45429 fis, cl... 366 1e-99
(Q5R9P3) RecName: Full=Protein transport protein Sec23A; AltName... 366 1e-99
BC036649_1(BC036649|pid:none) Homo sapiens Sec23 homolog A (S. c... 365 2e-99
BC097063_1(BC097063|pid:none) Danio rerio Sec23 homolog A (S. ce... 364 5e-99
AK028152_1(AK028152|pid:none) Mus musculus adult male tongue cDN... 362 3e-98
(A2VDL8) RecName: Full=Protein transport protein Sec23A; AltName... 361 4e-98
(Q1DY01) RecName: Full=Protein transport protein SEC23; 360 1e-97
CP003003_374(CP003003|pid:none) Myceliophthora thermophila ATCC ... 357 8e-97
AK146083_1(AK146083|pid:none) Mus musculus 11 days pregnant adul... 356 2e-96
(O74873) RecName: Full=Protein transport protein sec23-1; &AL03... 356 2e-96
BC005464_1(BC005464|pid:none) Mus musculus SEC23B (S. cerevisiae... 354 5e-96
(Q2HB00) RecName: Full=Protein transport protein SEC23; 354 7e-96
CR761466_1(CR761466|pid:none) Xenopus tropicalis finished cDNA, ... 353 9e-96
AK299513_1(AK299513|pid:none) Homo sapiens cDNA FLJ54142 complet... 353 2e-95
AK305579_1(AK305579|pid:none) Pan troglodytes mRNA for protein t... 353 2e-95
(Q15437) RecName: Full=Protein transport protein Sec23B; AltName... 353 2e-95
AK293944_1(AK293944|pid:none) Homo sapiens cDNA FLJ55960 complet... 353 2e-95
X97065_1(X97065|pid:none) H.sapiens mRNA for Sec23B isoform, 245... 352 2e-95
(A4R1J7) RecName: Full=Protein transport protein SEC23; 352 3e-95
(Q0CUU1) RecName: Full=Protein transport protein sec23; 352 3e-95
(Q5ZK03) RecName: Full=Protein transport protein Sec23A; AltName... 352 3e-95
(Q5BGR9) RecName: Full=Protein transport protein sec23; 350 8e-95
(Q2URM9) RecName: Full=Protein transport protein sec23; &AP0071... 350 1e-94
AY391408_1(AY391408|pid:none) Danio rerio Sec23-like protein B m... 349 2e-94
AM920428_320(AM920428|pid:none) Penicillium chrysogenum Wisconsi... 348 4e-94
BT127791_1(BT127791|pid:none) Dendroctonus ponderosae clone DPO0... 348 5e-94
(Q5R5G2) RecName: Full=Protein transport protein Sec23B; AltName... 346 1e-93
(Q0US25) RecName: Full=Protein transport protein SEC23; 345 2e-93
AJ276482_1(AJ276482|pid:none) Drosophila melanogaster putative s... 343 9e-93
AF467555_1(AF467555|pid:none) Rana ridibunda protein transport p... 343 1e-92
FP929083_73(FP929083|pid:none) Leptosphaeria maculans JN3 lm_Sup... 342 3e-92
BT001619_1(BT001619|pid:none) Drosophila melanogaster RE35250 fu... 341 5e-92
CP002687_1574(CP002687|pid:none) Arabidopsis thaliana chromosome... 340 1e-91
AB023036_15(AB023036|pid:none) Arabidopsis thaliana genomic DNA,... 338 3e-91
A71403(A71403) probable transport protein - Arabidopsis thaliana... 338 5e-91
AY074391_1(AY074391|pid:none) Arabidopsis thaliana putative tran... 338 5e-91
EZ424127_1(EZ424127|pid:none) TSA: Glossina morsitans morsitans ... 333 1e-89
FR824670_1(FR824670|pid:none) Albugo laibachii Nc14, genomic con... 332 2e-89
AC147484_12(AC147484|pid:none) Medicago truncatula clone mth2-52... 331 6e-89
JI166645_1(JI166645|pid:none) TSA: Ascaris suum ASCF_2001_2831 m... 329 2e-88
BT033606_1(BT033606|pid:none) Zea mays full-length cDNA clone ZM... 327 9e-88
AC096855_7(AC096855|pid:none) Oryza sativa chromosome 3 BAC OJ13... 325 3e-87
AP008217_807(AP008217|pid:none) Oryza sativa (japonica cultivar-... 324 8e-87
AC133931_3(AC133931|pid:none) Oryza sativa (japonica cultivar-gr... 324 8e-87
AC153129_2(AC153129|pid:none) Medicago truncatula clone mth2-103... 323 1e-86
CP001575_557(CP001575|pid:none) Micromonas sp. RCC299 chromosome... 321 5e-86
AJ542488_1(AJ542488|pid:none) Plasmodium falciparum 3D7 cDNA for... 321 5e-86
AM441443_3(AM441443|pid:none) Vitis vinifera contig VV78X063352.... 320 1e-85
AL132858_11(AL132858|pid:none) Caenorhabditis elegans YAC Y113G7... 320 1e-85
AK354139_1(AK354139|pid:none) Hordeum vulgare subsp. vulgare mRN... 320 1e-85
(O94672) RecName: Full=Protein transport protein sec23-2; &AL03... 319 2e-85
CP000589_249(CP000589|pid:none) Ostreococcus lucimarinus CCE9901... 317 7e-85
HE605207_63(HE605207|pid:none) Candida parapsilosis strain CDC31... 316 2e-84
AM910987_85(AM910987|pid:none) Plasmodium knowlesi strain H chro... 316 2e-84
CP000588_324(CP000588|pid:none) Ostreococcus lucimarinus CCE9901... 316 2e-84
(A3GFA2) RecName: Full=Protein transport protein SEC23; 315 3e-84
CU928176_37(CU928176|pid:none) Zygosaccharomyces rouxii strain C... 312 2e-83
AY080901_1(AY080901|pid:none) Acanthocheilonema viteae ABC prote... 311 5e-83
BC075240_1(BC075240|pid:none) Xenopus laevis MGC84454 protein, m... 311 7e-83
AP004399_10(AP004399|pid:none) Oryza sativa Japonica Group genom... 311 7e-83
(A5DA00) RecName: Full=Protein transport protein SEC23; 310 1e-82
(Q6FSI6) RecName: Full=Protein transport protein SEC23-2; &CR38... 307 7e-82
(Q5A455) RecName: Full=Protein transport protein SEC23; 307 7e-82
AB026652_1(AB026652|pid:none) Arabidopsis thaliana genomic DNA, ... 306 1e-81
BT003332_1(BT003332|pid:none) Arabidopsis thaliana Unknown prote... 306 1e-81
AY944407_1(AY944407|pid:none) Haemonchus contortus COPII-coated ... 304 6e-81
(Q758M7) RecName: Full=Protein transport protein SEC23; &AE0168... 304 6e-81
(Q6FSK3) RecName: Full=Protein transport protein SEC23-1; &CR38... 303 1e-80
FR823385_495(FR823385|pid:none) Neospora caninum Liverpool compl... 302 3e-80
CU928165_25(CU928165|pid:none) Kluyveromyces thermotolerans stra... 300 1e-79
HE576752_1496(HE576752|pid:none) Naumovozyma castellii CBS 4309 ... 300 2e-79
CR954209_269(CR954209|pid:none) Ostreococcus tauri strain OTTH05... 299 2e-79
CP002498_746(CP002498|pid:none) Eremothecium cymbalariae DBVPG#7... 299 2e-79
CP001332_252(CP001332|pid:none) Micromonas sp. RCC299 chromosome... 298 3e-79
FN357914_17(FN357914|pid:none) Schistosoma mansoni genome sequen... 289 3e-76
AB261031_1(AB261031|pid:none) Entamoeba histolytica gene for EhS... 271 5e-71
EU024514_1(EU024514|pid:none) Corchorus olitorius transport prot... 270 2e-70
FN554973_939(FN554973|pid:none) Trypanosoma brucei gambiense DAL... 267 9e-70
DQ683202_1(DQ683202|pid:none) Pichia pastoris SHL23, genomic DNA... 267 1e-69
AL121893_10(AL121893|pid:none) Human DNA sequence from clone RP1... 262 4e-68
HE573026_766(HE573026|pid:none) Trypanosoma vivax Y486 annotated... 256 2e-66
FR799573_666(FR799573|pid:none) Leishmania mexicana MHOM/GT/2001... 252 3e-65
HE605205_534(HE605205|pid:none) Candida parapsilosis strain CDC3... 234 8e-60
AY814682_1(AY814682|pid:none) Schistosoma japonicum SJCHGC01121 ... 233 1e-59
CR382133_213(CR382133|pid:none) Debaryomyces hansenii strain CBS... 233 1e-59
CR382130_951(CR382130|pid:none) Yarrowia lipolytica strain CLIB1... 227 1e-57
AP006852_154(AP006852|pid:none) Candida albicans genomic DNA, ch... 227 1e-57
DQ683201_1(DQ683201|pid:none) Pichia pastoris Sec23 gene, genomi... 225 4e-57
FM992694_150(FM992694|pid:none) Candida dubliniensis CD36 chromo... 222 3e-56
AM502228_64(AM502228|pid:none) Leishmania infantum chromosome 10... 191 8e-47
FR799563_33(FR799563|pid:none) Leishmania mexicana MHOM/GT/2001/... 190 1e-46
AM494947_33(AM494947|pid:none) Leishmania braziliensis chromosom... 189 4e-46
FR798984_34(FR798984|pid:none) Leishmania braziliensis MHOM/BR/7... 189 4e-46
CT005249_35(CT005249|pid:none) Leishmania major strain Friedlin ... 189 4e-46
AC092212_50(AC092212|pid:none) Trypanosoma brucei chromosome 8 c... 185 4e-45
FN554971_342(FN554971|pid:none) Trypanosoma brucei gambiense DAL... 185 6e-45
AP008215_840(AP008215|pid:none) Oryza sativa (japonica cultivar-... 175 4e-42
HE575321_339(HE575321|pid:none) Trypanosoma congolense IL3000 an... 174 8e-42
CP001952_64(CP001952|pid:none) Encephalitozoon intestinalis ATCC... 155 5e-36
(Q8SQX2) RecName: Full=Protein transport protein SEC23; &AL5904... 155 6e-36
AK303485_1(AK303485|pid:none) Homo sapiens cDNA FLJ52821 complet... 84 2e-14
FM992690_200(FM992690|pid:none) Candida dubliniensis CD36 chromo... 76 4e-12
EF148680_1(EF148680|pid:none) Populus trichocarpa x Populus delt... 75 6e-12
AL033406_1(AL033406|pid:none) S.pombe chromosome III cosmid c5E4... 62 9e-08
AY548918_2(AY548918|pid:none) Antonospora locustae putative vacu... 49 6e-04
AP008207_1159(AP008207|pid:none) Oryza sativa (japonica cultivar... 46 0.004
AP002953_15(AP002953|pid:none) Oryza sativa Japonica Group genom... 38 1.1
AP002953_16(AP002953|pid:none) Oryza sativa Japonica Group genom... 37 2.4
AM502240_90(AM502240|pid:none) Leishmania infantum chromosome 22... 37 3.2
FR799609_86(FR799609|pid:none) Leishmania donovani BPK282A1 comp... 36 4.2
BT123860_1(BT123860|pid:none) Picea sitchensis clone WS04718_B08... 36 4.2
FN357585_13(FN357585|pid:none) Schistosoma mansoni genome sequen... 36 5.4
CP002865_70(CP002865|pid:none) Zymomonas mobilis subsp. pomaceae... 35 7.1
AP012206_5872(AP012206|pid:none) Bradyrhizobium japonicum USDA 6... 35 9.3
CP002355_1749(CP002355|pid:none) Sulfuricurvum kujiense DSM 1699... 35 9.3
>(P0CR38) RecName: Full=Protein transport protein SEC23; &(P0CR39)
RecName: Fu &AE017350_111(AE017350|pid:none)
Length = 763
Score = 388 bits (997), Expect = e-106
Identities = 193/348 (55%), Positives = 246/348 (70%), Gaps = 4/348 (1%)
Frame = +1
Query: 4 IGHMSSRNNKTSCVGENEIGIGGTSSWKVCALDQNSTFAFYFEIANTQQNA--PEQLGLV 177
IGH+ S N K+SCVGE EIGIG TS+WKVC+L ST A YFE+ A P Q GL+
Sbjct: 417 IGHVISANKKSSCVGETEIGIGQTSAWKVCSLTPKSTLATYFEVVTPAGQALTPNQSGLI 476
Query: 178 QFITSYQNSLGKQILRVSTIRREWVQHTMEQQQNITMLANGFDQETSAVLMARLAVFKAE 357
QF+T YQ+S G+ LRV+T+ R + Q+ +A FDQE +AVLMAR+AVFKAE
Sbjct: 477 QFVTHYQHSSGQYRLRVTTVSRVF------QEGGHPSIAASFDQEAAAVLMARIAVFKAE 530
Query: 358 TEELPDITRWLDKMLIKLVSKYADYRRDDPTSFKLVSNFSIYPHFMFHLRRSSFLQVFNS 537
++ PD+ RWLD+MLI+L K+ADYR++DPTSF+L NFSIYP FMFHLRRS FLQVFN+
Sbjct: 531 IDDSPDVLRWLDRMLIRLCQKFADYRKEDPTSFQLSPNFSIYPQFMFHLRRSQFLQVFNN 590
Query: 538 SPDESSFYRFMLNRENVSNSLIMIQPTLEKYSFSGPPHPEVXXXXXXXXXXXXXXXTFFH 717
SPDE++FYR +LN +V+NSLIMIQPTL Y F PHP + TFFH
Sbjct: 591 SPDETAFYRHVLNDSDVNNSLIMIQPTLMSYGFDSEPHPVLLDSVSIRPDVILLLDTFFH 650
Query: 718 VLIFHGETIAQWRKAGYDKDPQHQNFRDLLQAPRDDAAHILKERFPYPRYIVCDQHSGEA 897
+LIFHGETIAQWRKA Y + + NF++LL+AP DA +L++R P PRY+VCDQ +A
Sbjct: 651 ILIFHGETIAQWRKANYQEQEDYANFKELLEAPIGDAQELLEDRMPIPRYVVCDQGGSQA 710
Query: 898 RFLLATIDPNITHT--SNTPQDPSKGEIVFTDDVNLHVFLEHLKKFAV 1035
RFLL+ ++P+ TH SN P+ G+ +FTDDV+L VF+EHLK+ AV
Sbjct: 711 RFLLSKLNPSTTHMSGSNYGAGPAGGQAIFTDDVSLQVFMEHLKRLAV 758
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 5349213
Number of Hits to DB: 3,177,735,730
Number of extensions: 64415684
Number of successful extensions: 157061
Number of sequences better than 10.0: 121
Number of HSP's gapped: 156653
Number of HSP's successfully gapped: 125
Length of query: 427
Length of database: 1,732,582,204
Length adjustment: 135
Effective length of query: 292
Effective length of database: 1,010,438,449
Effective search space: 295048027108
Effective search space used: 295048027108
Neighboring words threshold: 12
Window for multiple hits: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
S2: 32 (16.9 bits)
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