Dictyostelium discoideum cDNA Clone SLH727

Size:		1283
3' sequence:	TM980714
5' sequence:	TM990125
Whole insert?:	Y
Accession #:	
Remarks:	*

Sequence SLH727

GCCATTGGTC ATATGTCTTC CAGAAACAAC AAGACCTCTT GCGTGGGGGA
GAATGAAATT GGCATTGGTG GCACTAGCAG TTGGAAGGTT TGTGCTCTCG
ATCAAAATTC AACATTTGCC TTTTACTTTG AAATTGCCAA CACTCAACAA
AATGCTCCAG AACAATTGGG TTTGGTTCAA TTCATAACCT CTTATCAAAA
TAGTTTAGGT AAACAAATCT TACGTGTTTC CACCATTAGA AGAGAGTGGG
TACAACATAC AATGGAACAA CAACAAAATA TAACCATGTT GGCAAATGGT
TTCGATCAGG AAACCTCTGC CGTCTTGATG GCACGTTTGG CAGTGTTCAA
AGCTGAGACA GAAGAGTTGC CAGATATCAC TAGATGGTTG GATAAGATGT
TGATTAAATT GGTCTCTAAA TATGCCGACT ATAGAAGAGA TGATCCAACC
TCTTTCAAAT TGGTTTCAAA CTTCTCCATC TATCCTCACT TTATGTTCCA
TCTCAGAAGA AGTAGTTTCC TTCAAGTTTT CAATTCAAGT CCTGATGAAT
CAAGTTTCTA TAGATTCATG TTAAATCGTG AAAACGTTTC CAACTCTTTG
ATTATGATTC AACCAACCCT AGAGAAATAC TCGTTCAGTG GTCCACCTCA
TCCAGAGGTC TTGAGTGCAA GTTCAATCTC CATCGATAGT ATCCTCTTGT
TGGATACTTT CTTCCATGTT CTCATTTTCC ATGGTGAAAC TATAGCTCAA
TGGAGAAAAG CTGGCTACGA TAAAGATCCA CAACATCAAA ACTTTAGAGA
CCTCTTACAA GCTCCAAGGG ATGATGCTGC TCATATCCTT AAAGAACGTT
TCCCTTATCC TCGTTATATA GTTTGTGATC AACACTCTGG TGAAGCTCGT
TTCCTTTTAG CAACTATCGA TCCAAATATA ACTCACACTA GTAATACACC
TCAAGATCCT TCAAAAGGTG AAATCGTTTT CACTGATGAT GTAAATTTAC
ATGTCTTTTT GGAACATTTA AAAAAGTTTG CAGTTCATTT TTTAATTTTA
AAAATAATAA TAATAATAAT AATAGTAGTA ATAATAATAA AAAGAACAAT
TTCTATAAAA AATATATTTT TAATAAGAGA AAAACTGCTA AAATAAAATT
ATCATCAACT ACAACAACTA CAACAACAAC AACTACTACA ACATCAACTC
CATTTAAAAA ATTCTTTTTT AAAAATAAAA AGGATTCTAA TAAATGATTT
AAAAAAAAAA AACTAAAAAA AAAAAAAAAA AAA

Translated Amino Acid Sequence SLH727

AIGHMSSRNNKTSCVGENEIGIGGTSSWKVCALDQNSTFAFYFEIANTQQNAPEQLGLVQ
FITSYQNSLGKQILRVSTIRREWVQHTMEQQQNITMLANGFDQETSAVLMARLAVFKAET
EELPDITRWLDKMLIKLVSKYADYRRDDPTSFKLVSNFSIYPHFMFHLRRSSFLQVFNSS
PDESSFYRFMLNRENVSNSLIMIQPTLEKYSFSGPPHPEVLSASSISIDSILLLDTFFHV
LIFHGETIAQWRKAGYDKDPQHQNFRDLLQAPRDDAAHILKERFPYPRYIVCDQHSGEAR
FLLATIDPNITHTSNTPQDPSKGEIVFTDDVNLHVFLEHLKKFAVHFLILKIIIIIIIVV
IIIKRTISIKNIFLIREKLLK*nyhqlqqlqqqqllqhqlhlknsflkikrilindlkkk
n*kkkkk

Homology SLH727 vs CSM-cDNA

Sequences producing significant alignments:                      (bits) Value


SLH727 (SLH727Q) /CSM/SL/SLH7-B/SLH727Q.Seq.d/                       2085   0.0
AFO303 (AFO303Q) /CSM/AF/AFO3-A/AFO303Q.Seq.d/                       1816   0.0
AHJ516 (AHJ516Q) /CSM/AH/AHJ5-A/AHJ516Q.Seq.d/                       1362   0.0
VHD365 (VHD365Q) /CSM/VH/VHD3-C/VHD365Q.Seq.d/                       1257   0.0
AHD747 (AHD747Q) /CSM/AH/AHD7-B/AHD747Q.Seq.d/                       1174   0.0
AHO547 (AHO547Q) /CSM/AH/AHO5-B/AHO547Q.Seq.d/                       1096   0.0
AHM815 (AHM815Q) /CSM/AH/AHM8-A/AHM815Q.Seq.d/                       1096   0.0
VHJ512 (VHJ512Q) /CSM/VH/VHJ5-A/VHJ512Q.Seq.d/                       1043   0.0
CHR833 (CHR833Q) /CSM/CH/CHR8-B/CHR833Q.Seq.d/                       1031   0.0
CHH233 (CHH233Q) /CSM/CH/CHH2-B/CHH233Q.Seq.d/                       1027   0.0

Homology SLH727 vs DNA

Sequences producing significant alignments:                  (bits) Value  N


(AU062134) Dictyostelium discoideum slug cDNA, clone SLH727.     1437   0.0    1
(BJ353446) Dictyostelium discoideum cDNA clone:dda50o03, 3' ...  1342   0.0    2
(BJ438300) Dictyostelium discoideum cDNA clone:ddv37b17, 3' ...  1257   0.0    1
(BJ328678) Dictyostelium discoideum cDNA clone:dda29f01, 5' ...  1233   0.0    1
(BJ350024) Dictyostelium discoideum cDNA clone:dda38n11, 3' ...  1051   0.0    2
(BJ346084) Dictyostelium discoideum cDNA clone:dda29f01, 3' ...  1051   0.0    1
(BJ356476) Dictyostelium discoideum cDNA clone:dda60m11, 3' ...  1033   0.0    1
(BJ355243) Dictyostelium discoideum cDNA clone:dda56n04, 3' ...  1033   0.0    1
(BJ442501) Dictyostelium discoideum cDNA clone:ddv50g03, 3' ...   979   0.0    1
(BJ386132) Dictyostelium discoideum cDNA clone:ddc57b10, 3' ...   967   0.0    1

Homology SLH727 vs Protein

Sequences producing significant alignments:                      (bits) Value


(P0CR38) RecName: Full=Protein transport protein SEC23;  &(P0CR3...   388   e-106
(Q4PE39) RecName: Full=Protein transport protein SEC23;               383   e-104
CR860755_1(CR860755|pid:none) Pongo abelii mRNA; cDNA DKFZp459O1...   366   1e-99
(Q15436) RecName: Full=Protein transport protein Sec23A; AltName...   366   1e-99
AK312259_1(AK312259|pid:none) Homo sapiens cDNA, FLJ92554, Homo ...   366   1e-99
AK127355_1(AK127355|pid:none) Homo sapiens cDNA FLJ45429 fis, cl...   366   1e-99
(Q5R9P3) RecName: Full=Protein transport protein Sec23A; AltName...   366   1e-99
BC036649_1(BC036649|pid:none) Homo sapiens Sec23 homolog A (S. c...   365   2e-99
BC097063_1(BC097063|pid:none) Danio rerio Sec23 homolog A (S. ce...   364   5e-99
AK028152_1(AK028152|pid:none) Mus musculus adult male tongue cDN...   362   3e-98

Homology SLH727 vs Genome