Dictyostelium discoideum cDNA Clone SLH712

Size:		617
3' sequence:	TM980714
5' sequence:	TM990125
Whole insert?:	Y
Accession #:	
Remarks:	*

Sequence SLH712

GGAGATCTTT GCACTATTGG GTAAGAATCC ATTGATGCAA ATCGCAACAG
AATTGGAAAG ATTGGCACTC TCTGACAGCT ATTTCATAGA GAGACAACTC
TATCCAAATG TTGATTTCTA CTCTGGTATC ATTTACAAGA GTATGGGTTT
CCCAACTGAT ATGTTTCCAG TGTTATTCTC AATTCCAAGA GCTGCTGGTT
GGTTGGCTCA TTGGGTTGAA GAATTGGCTG ATCCAGAACT TCGTATCTTT
AGACCACGTC AAATCTATAT GGGTCGTAGA AATATGAATT ATGTTCCAAT
GGATGCTCGT CAAGTTCAAC AACATAATAG TGGTGAGAAA TTATCCTCAT
TCTCTTCTGG TTTCGATCGT CGTAGAGATG TCTCTGAAGA ACTTTTTAAT
TTTGAAGATG GTGCAATTCC AAAAACTGCC ACTGGTAGTA AATCTCAACT
ATCTGCTTCA ATTGAACAAT CTTTTGGTGA GAAAATATCT CCACAAAGTC
ATTAAATTCA AATATTCATT TTTGGTAAAA AAAAAAAAAA AAAAAACATA
AAAATAAAGA TAAAAATAAT AGGGGAAAAT TTTAAAAATA AAAAAAAAAA
AAAAAAAAAA AAAAAAA

Translated Amino Acid Sequence SLH712

EIFALLGKNPLMQIATELERLALSDSYFIERQLYPNVDFYSGIIYKSMGFPTDMFPVLFS
IPRAAGWLAHWVEELADPELRIFRPRQIYMGRRNMNYVPMDARQVQQHNSGEKLSSFSSG
FDRRRDVSEELFNFEDGAIPKTATGSKSQLSASIEQSFGEKISPQSH*iqififgkkkkk
knikikikiigenfknkkkkkkkkk

Homology SLH712 vs CSM-cDNA

Sequences producing significant alignments:                      (bits) Value


SSC167 (SSC167Q) /CSM/SS/SSC1-C/SSC167Q.Seq.d/                       1043   0.0
SLH712 (SLH712Q) /CSM/SL/SLH7-A/SLH712Q.Seq.d/                       1043   0.0
SSD179 (SSD179Q) /CSM/SS/SSD1-D/SSD179Q.Seq.d/                       1031   0.0
SSG229 (SSG229Q) /CSM/SS/SSG2-B/SSG229Q.Seq.d/                        971   0.0
SSK530 (SSK530Q) /CSM/SS/SSK5-B/SSK530Q.Seq.d/                        105   8e-22
SSG238 (SSG238Q) /CSM/SS/SSG2-B/SSG238Q.Seq.d/                        105   8e-22
SSF821 (SSF821Q) /CSM/SS/SSF8-A/SSF821Q.Seq.d/                        105   8e-22
SLD239 (SLD239Q) /CSM/SL/SLD2-B/SLD239Q.Seq.d/                        105   8e-22
SFE393 (SFE393Q) /CSM/SF/SFE3-D/SFE393Q.Seq.d/                        105   8e-22
SFC695 (SFC695Q) /CSM/SF/SFC6-D/SFC695Q.Seq.d/                        105   8e-22

Homology SLH712 vs DNA

Sequences producing significant alignments:                  (bits) Value  N


(AF310892) Dictyostelium discoideum citrate synthase (gltA) ...  1043   0.0    1
(AC115584) Dictyostelium discoideum chromosome 2 map complem...  1043   0.0    1
(AU062131) Dictyostelium discoideum slug cDNA, clone SLH712.     1043   0.0    1
(C91905) Dictyostelium discoideum slug cDNA, clone SSC167.       1043   0.0    1
(C89713) Dictyostelium discoideum slug cDNA, clone SSG229.       1043   0.0    1
(C92167) Dictyostelium discoideum slug cDNA, clone SSD179.       1031   0.0    1
(AU039399) Dictyostelium discoideum slug cDNA, clone SLH712.      529   e-146  1
(AB109907) Tetrahymena thermophila tgCS mRNA for putative ci...    86   8e-23  2
(EV834772) TT1D349TH Tetrahymena thermophila SB210 cDNA libr...    86   8e-23  2
(EV834773) TT1D349TV Tetrahymena thermophila SB210 cDNA libr...    86   8e-23  2

Homology SLH712 vs Protein

Sequences producing significant alignments:                      (bits) Value


AF310892_1(AF310892|pid:none) Dictyostelium discoideum citrate s...   305   1e-81
AB109907_1(AB109907|pid:none) Tetrahymena thermophila tgCS mRNA ...   154   2e-36
CP001099_363(CP001099|pid:none) Chlorobaculum parvum NCIB 8327, ...   149   1e-34
CP002271_4016(CP002271|pid:none) Stigmatella aurantiaca DW4/3-1,...   149   1e-34
AB167269_1(AB167269|pid:none) Chlorobium limicola cit gene for c...   147   3e-34
FP565575_2729(FP565575|pid:none) Candidatus Methylomirabilis oxy...   147   4e-34
CP000113_3427(CP000113|pid:none) Myxococcus xanthus DK 1622, com...   143   5e-33
AK120755_1(AK120755|pid:none) Oryza sativa Japonica Group cDNA c...   143   7e-33
AK373695_1(AK373695|pid:none) Hordeum vulgare subsp. vulgare mRN...   142   1e-32
CP000804_571(CP000804|pid:none) Roseiflexus castenholzii DSM 139...   142   1e-32

Homology SLH712 vs Genome