Dictyostelium discoideum cDNA Clone SLG663

Size:		1.7k
3' sequence:	TM980624
5' sequence:	TM990121
Whole insert?:	*
Accession #:	
Remarks:	*

Sequence SLG663

CAAATAGATT ATGAATATCA AAGTGGATTT GGTAATTCCT TTGAAAGTGA
AGCAATTAAA GGAACATTAC CAAAGGGAAG AAATGCACCA CAAAATTGTC
CACTCGATTT ATATGCTGAA CAACTCTCTG GTAATGCTTT CACAGCACCA
AGACATACCC AACAAAGATC ATGGTTATAT CGTATTAGAC CATCAGTTTG
TCATACACCA CTTAAACCAA TTGATTCAGG ATTAGTTTGT GATTTAAATA
ATTTACATGT TGATCCAAAT CAATTAAGAT GGAAACCATT CCCAATTACA
GAAGATAAAC CACACGATTT CGTTGAGGGT CTCATTACAA TCGCTGGTGC
TGGTCATGCA TCAGTACGTC ATGGTCTTGC AATTCATATN TANNCAGCAA
CAAAGAGTAT GGAAAATAAA TCCTTTTATA ACTCTGATGG TGATTTCTTA
ATTGTACCAC AACAAGGTAC ATTAGATATT CAAACAGAAT TTGGATTTAT
GAAAGTTAAA TCAGGTGAGA TTTGTGTAAT TCAAAGAGGT ATTACATTTA
GTGTTAATGT TGAAGGACCA ACTAGAGGTT ATATTTGTGA GGTGTTTGGA
TCACATTTTA AACTTCCAGA TTTAGGACCA ATTGGTGCTA ATGG------
----AATTCC TTGGAAAGTT ATTTAGTGCA ACACAAACCT ACTCACCATT
CAATGTTGTA GCATGGCATG GTAACTATTG TCCATACAAG TATGATCTCA
GTTTATTCTG TGTAGTTAAT TCGGTTTCAT TTGATCATTT GGATCCATCG
ATTTTCACAG TTTTAACAGC ACCAACCAAT GAGGTGGGTG TTGCTGCTGC
TGATTTCGTA ATTTTCCCAC CACGTTGGTT GGTTCAAGAG AATACATTTA
GACCACCATA CTTTCATCGT AATTGTATGT CTGAATTTAT GGGTTTAATC
CGTGGTGTCT ATGAAGCAAA GAAAGAGGGT TTCTTACCAG GTGGTGGTAG
TTTACACAGT TGTATGACTC CACATGGTCC TGACTCTGAT ACCTTTTATG
CCGCCATTAA AGCTGAATTA AAACCAACTA AAATTCCAGA TGTAGCTTTA
GCTTTCATGT TTGAATCCTC TCTTATTTTA GGTATCTCTG ATTATGCTAA
AAAGAATTTT ATTGATGATG ATTATTGGAA ATGTTGGCAA GGTTTAAAGG
ATAATTCTAA AATTTAAATT AAAAAAAAAA AAAACATTTT AAAATTATCT
TTTTTAAAAA AAAAATACAT ATATA

Translated Amino Acid Sequence SLG663

QIDYEYQSGFGNSFESEAIKGTLPKGRNAPQNCPLDLYAEQLSGNAFTAPRHTQQRSWLY
RIRPSVCHTPLKPIDSGLVCDLNNLHVDPNQLRWKPFPITEDKPHDFVEGLITIAGAGHA
SVRHGLAIHXXXATKSMENKSFYNSDGDFLIVPQQGTLDIQTEFGFMKVKSGEICVIQRG
ITFSVNVEGPTRGYICEVFGSHFKLPDLGPIGAN---

---FLGKLFSATQTYSPFNVVAWHGNYCPYKYDLSLFCVVNSVSFDHLDPSIFTVLTAPT
NEVGVAAADFVIFPPRWLVQENTFRPPYFHRNCMSEFMGLIRGVYEAKKEGFLPGGGSLH
SCMTPHGPDSDTFYAAIKAELKPTKIPDVALAFMFESSLILGISDYAKKNFIDDDYWKCW
QGLKDNSKI*ikkkknilklsflkkkyiy

Homology SLG663 vs CSM-cDNA

Sequences producing significant alignments:                      (bits) Value


SLG663 (SLG663Q) /CSM/SL/SLG6-C/SLG663Q.Seq.d/                       2341   0.0
CFF213 (CFF213Q) /CSM/CF/CFF2-A/CFF213Q.Seq.d/                       1102   0.0
VFN835 (VFN835Q) /CSM/VF/VFN8-B/VFN835Q.Seq.d/                       1025   0.0
VFL535 (VFL535Q) /CSM/VF/VFL5-B/VFL535Q.Seq.d/                       1017   0.0
VFI324 (VFI324Q) /CSM/VF/VFI3-A/VFI324Q.Seq.d/                       1011   0.0
SHD714 (SHD714Q) /CSM/SH/SHD7-A/SHD714Q.Seq.d/                       1001   0.0
VFB729 (VFB729Q) /CSM/VF/VFB7-B/VFB729Q.Seq.d/                        959   0.0
VFO668 (VFO668Q) /CSM/VF/VFO6-C/VFO668Q.Seq.d/                        928   0.0
VFK866 (VFK866Q) /CSM/VF/VFK8-C/VFK866Q.Seq.d/                        912   0.0
VSK262 (VSK262Q) /CSM/VS/VSK2-C/VSK262Q.Seq.d/                        902   0.0

Homology SLG663 vs DNA

Sequences producing significant alignments:                  (bits) Value  N


(AF189237) Dictyostelium discoideum homogentisate 1,2-dioxyg...  1255   0.0    1
(AU061928) Dictyostelium discoideum slug cDNA, clone SLG663.     1255   0.0    1
(AU039884) Dictyostelium discoideum slug cDNA, clone SLG663.     1098   0.0    1
(BJ431977) Dictyostelium discoideum cDNA clone:ddv17p05, 3' ...  1011   0.0    3
(BJ372061) Dictyostelium discoideum cDNA clone:ddc11i04, 3' ...   959   0.0    3
(BJ436256) Dictyostelium discoideum cDNA clone:ddv30g18, 3' ...   720   0.0    3
(BJ417647) Dictyostelium discoideum cDNA clone:ddv28f10, 5' ...  1025   0.0    1
(BJ415952) Dictyostelium discoideum cDNA clone:ddv24e09, 5' ...  1017   0.0    1
(BJ393387) Dictyostelium discoideum cDNA clone:dds31l03, 5' ...   940   0.0    3
(BJ411426) Dictyostelium discoideum cDNA clone:ddv4j07, 5' e...   959   0.0    1

Homology SLG663 vs Protein

Sequences producing significant alignments:                      (bits) Value


(Q54QI4) RecName: Full=Homogentisate 1,2-dioxygenase;          E...   444   0.0
AF189237_1(AF189237|pid:none) Dictyostelium discoideum homogenti...   444   0.0
(O09173) RecName: Full=Homogentisate 1,2-dioxygenase;          E...   254   e-135
(Q93099) RecName: Full=Homogentisate 1,2-dioxygenase;          E...   252   e-134
AF000573_1(AF000573|pid:none) Homo sapiens homogentisate 1,2-dio...   252   e-133
EU831603_1(EU831603|pid:none) Synthetic construct Homo sapiens c...   252   e-133
AK290782_1(AK290782|pid:none) Homo sapiens cDNA FLJ78087 complet...   251   e-133
FJ515744_1(FJ515744|pid:none) Bos taurus homogentisate 1,2-dioxy...   253   e-131
GU589196_1(GU589196|pid:none) Ictalurus punctatus clone CBZB7022...   256   e-131
BC080022_1(BC080022|pid:none) Xenopus laevis MGC82288 protein, m...   245   e-129

Homology SLG663 vs Genome