<List of Series> <Series: SLG4-D> <Clone: SLG496> <SEQ> <Translated> <CSM> <DNA> <Protein> <Genome> <PSORT> <MOTIF>
Dictyostelium discoideum cDNA Clone SLG496
Dictyostelium discoideum cDNA Project Home
Size: 1.4k
3' sequence: TM980616
5' sequence: TM990119
Whole insert?: *
Accession #:
Remarks: *
Sequence SLG496
GAGAAGATTT CATACGATTC AATCATTTTT AGATTCGATA GCATCAAGTG
ATGTAATTAA GGAACAAACT TCAAAGTGGG GTCTATCATT TCAATCTCCA
CTAGAGGTAA TTGCAAGTCA ATTTCAACCA CCAATGAAGG ATATACCACG
TTATAAAAAG TTGAAAGATA TTTGGGCAGT AATTGTATCT GAAGATAATA
AGAATTGTAT CGATCAGTTT GTACGTCTAA TGTTTGAAAA GTTTACAATG
GAGAGACCAA TTGTAAGAGT AATTAAACAC AATCCAATGG GAAGAGATTA
CTCTATGGCA ATTAAAGATT TGGTAGAAAG AGATAATCCA TCATTCATAG
TTGTAGTTGT AAACGGTGTT AA-------- --CTATATTG TTGTGGAAAA
ACAAACTCAC CTTCGTCTAG TCAATATGTC AAGAGATCTT GGTAATCCTG
ATCAAGGTGT TGTTGTAAAT AAACCAGTTA CAAAAGAAAG ATGGTATGAA
TTCTTTTTAG TCTCTCAAAG AACTCATAAA GGTACTACAA ATCCAACTCA
TTATCATGTA CTTCAAGATG ATACAGAAAT TGAAATGGAA TCTTTACAAC
AATTAACATT CAATTTATGT TTTCTTTATT TCAATTTTGA TCAAGCAGTT
TCTGTACCAA TGGTATGCCA ATACTCTCAT AAAAGTGCAC TTTTATGTGG
TAAATCTTTA AATGCTACTA CTCCAGATGA AATGAGTAAT CATTTATTCT
TTTTATAAAA AAAAAAAAAA AAAAAAAAAA AAAAAAAACA AACAAAAAAA
Translated Amino Acid Sequence SLG496
<All Frames>
RRFHTIQSFLDSIASSDVIKEQTSKWGLSFQSPLEVIASQFQPPMKDIPRYKKLKDIWAV
IVSEDNKNCIDQFVRLMFEKFTMERPIVRVIKHNPMGRDYSMAIKDLVERDNPSFIVVVV
NGV---
---YIVVEKQTHLRLVNMSRDLGNPDQGVVVNKPVTKERWYEFFLVSQRTHKGTTNPTHY
HVLQDDTEIEMESLQQLTFNLCFLYFNFDQAVSVPMVCQYSHKSALLCGKSLNATTPDEM
SNHLFFL*kkkkkkkkkkqtkk
Homology SLG496 vs CSM-cDNA
<more CSM info>
Sequences producing significant alignments: (bits) Value
SLG496 (SLG496Q) /CSM/SL/SLG4-D/SLG496Q.Seq.d/ 1439 0.0
SLJ101 (SLJ101Q) /CSM/SL/SLJ1-A/SLJ101Q.Seq.d/ 347 2e-94
VHM727 (VHM727Q) /CSM/VH/VHM7-B/VHM727Q.Seq.d/ 50 5e-05
VHG464 (VHG464Q) /CSM/VH/VHG4-C/VHG464Q.Seq.d/ 50 5e-05
SSK802 (SSK802Q) /CSM/SS/SSK8-A/SSK802Q.Seq.d/ 50 5e-05
SSI205 (SSI205Q) /CSM/SS/SSI2-A/SSI205Q.Seq.d/ 50 5e-05
SHL736 (SHL736Q) /CSM/SH/SHL7-B/SHL736Q.Seq.d/ 50 5e-05
SHL722 (SHL722Q) /CSM/SH/SHL7-A/SHL722Q.Seq.d/ 50 5e-05
SHL552 (SHL552Q) /CSM/SH/SHL5-C/SHL552Q.Seq.d/ 50 5e-05
SHL539 (SHL539Q) /CSM/SH/SHL5-B/SHL539Q.Seq.d/ 50 5e-05
Homology SLG496 vs DNA
<more DNA info>
Sequences producing significant alignments: (bits) Value N
(AC115682) Dictyostelium discoideum chromosome 2 map 4101105... 737 0.0 2
(AU039817) Dictyostelium discoideum slug cDNA, clone SLG496. 741 0.0 1
(AU061893) Dictyostelium discoideum slug cDNA, clone SLG496. 737 0.0 1
(AU060297) Dictyostelium discoideum slug cDNA, clone SLJ101. 347 4e-91 1
(AU053554) Dictyostelium discoideum slug cDNA, clone SLJ101. 317 4e-82 1
(BJ407900) Dictyostelium discoideum cDNA clone:dds44c06, 3' ... 46 4e-06 3
(BJ396806) Dictyostelium discoideum cDNA clone:dds44c06, 5' ... 46 5e-06 3
(BJ440446) Dictyostelium discoideum cDNA clone:ddv43p16, 3' ... 46 6e-06 3
(C90322) Dictyostelium discoideum slug cDNA, clone SSI205. 46 8e-06 3
(BJ381408) Dictyostelium discoideum cDNA clone:ddc41n08, 3' ... 46 8e-06 3
Homology SLG496 vs Protein
<more Protein info>
Sequences producing significant alignments: (bits) Value
GU076092_1(GU076092|pid:none) Saccoglossus kowalevskii piwi-like... 121 5e-26
AC116924_18(AC116924|pid:none) Dictyostelium discoideum chromoso... 120 1e-25
AM942741_1(AM942741|pid:none) Isodiametra pulchra mRNA for piwi-... 113 1e-23
(Q8CGT6) RecName: Full=Piwi-like protein 4; Short=mAgo5... 113 1e-23
(Q7Z3Z4) RecName: Full=Piwi-like protein 4; &AB590313_1(AB59031... 112 2e-23
AB372007_1(AB372007|pid:none) Bombyx mori BmAGO3 mRNA for AGO3, ... 112 2e-23
AB079366_1(AB079366|pid:none) Homo sapiens PIWIL1 mRNA, complete... 112 2e-23
AK096837_1(AK096837|pid:none) Homo sapiens cDNA FLJ39518 fis, cl... 112 2e-23
AB533506_1(AB533506|pid:none) Ephydatia fluviatilis EfPiwiB mRNA... 110 8e-23
EU413991_1(EU413991|pid:none) Oryzias latipes piwi-like protein ... 107 5e-22
Homology SLG496 vs Genome
<more Genome info>
<List of Series> <Series: SLG4-D> <Clone: SLG496> <SEQ> <Translated> <CSM> <DNA> <Protein> <Genome> <PSORT> <MOTIF>
Dictyostelium discoideum cDNA Project Home