Homology SLG288 vs Protein
Query= SLG288 (SLG288Q) /CSM/SL/SLG2-D/SLG288Q.Seq.d/
(1163 letters)
Database: nrp_B
5,349,213 sequences; 1,732,582,204 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AY232268_1(AY232268|pid:none) Dictyostelium discoideum putative ... 751 0.0
(Q54J98) RecName: Full=Rho GTPase-activating protein gacX; AltNa... 49 4e-04
BX005083_7(BX005083|pid:none) Zebrafish DNA sequence from clone ... 45 0.010
BC135618_1(BC135618|pid:none) Xenopus tropicalis hypothetical pr... 44 0.023
BC161647_1(BC161647|pid:none) Xenopus tropicalis hypothetical pr... 44 0.023
BC166132_1(BC166132|pid:none) Xenopus tropicalis cDNA clone IMAG... 44 0.023
CU074274_1(CU074274|pid:none) Podospora anserina genomic DNA, NW... 44 0.023
(Q80YW0) RecName: Full=Cytohesin-4; AltName: Full=PH, SEC7 and c... 42 0.086
AK304453_1(AK304453|pid:none) Homo sapiens cDNA FLJ54256 complet... 42 0.086
(Q8MY12) RecName: Full=Myosin heavy chain kinase C; Sho... 42 0.086
BC018505_1(BC018505|pid:none) Mus musculus cytohesin 4, mRNA (cD... 42 0.086
AK152306_1(AK152306|pid:none) Mus musculus bone marrow macrophag... 42 0.086
AK315052_1(AK315052|pid:none) Homo sapiens cDNA, FLJ96001, highl... 42 0.086
AJ236896_1(AJ236896|pid:none) Caenorhabditis elegans mRNA for GR... 41 0.15
(P34512) RecName: Full=GTP exchange factor for ARFs 1; &FO08053... 41 0.15
BC089655_1(BC089655|pid:none) Xenopus tropicalis dual adaptor of... 41 0.15
(O43739) RecName: Full=Cytohesin-3; AltName: Full=ARF nucleotide... 40 0.19
AK313728_1(AK313728|pid:none) Homo sapiens cDNA, FLJ94328, highl... 40 0.19
FQ310507_68(FQ310507|pid:none) Dicentrarchus labrax chromosome s... 40 0.19
AC004895_2(AC004895|pid:none) Homo sapiens PAC clone RP4-810E6 f... 40 0.19
AK168566_1(AK168566|pid:none) Mus musculus 16 days embryo kidney... 40 0.19
(O08967) RecName: Full=Cytohesin-3; AltName: Full=ARF nucleotide... 40 0.19
AC004895_1(AC004895|pid:none) Homo sapiens PAC clone RP4-810E6 f... 40 0.19
BC125677_1(BC125677|pid:none) Xenopus tropicalis hypothetical pr... 40 0.19
CP000881_102(CP000881|pid:none) Hemiselmis andersenii chromosome... 40 0.25
AK295630_1(AK295630|pid:none) Homo sapiens cDNA FLJ58530 complet... 40 0.25
U59752_1(U59752|pid:none) Human Sec7p-like protein mRNA, partial... 40 0.25
(Q9HD67) RecName: Full=Myosin-X; AltName: Full=Unconventional my... 40 0.33
BT059417_1(BT059417|pid:none) Salmo salar clone ssal-rgf-541-375... 40 0.33
AF132021_1(AF132021|pid:none) Homo sapiens myosin X (MYO10) mRNA... 40 0.33
AK316138_1(AK316138|pid:none) Homo sapiens cDNA, FLJ79037 comple... 40 0.33
BC024692_1(BC024692|pid:none) Mus musculus myosin X, mRNA (cDNA ... 40 0.33
BC156151_1(BC156151|pid:none) Synthetic construct Mus musculus c... 40 0.33
AL832428_1(AL832428|pid:none) Homo sapiens mRNA; cDNA DKFZp762A0... 40 0.33
AX405628_1(AX405628|pid:none) Sequence 43 from Patent WO0222660. 40 0.33
AB018342_1(AB018342|pid:none) Homo sapiens mRNA for KIAA0799 pro... 40 0.33
AK122371_1(AK122371|pid:none) Mus musculus mRNA for mKIAA0799 pr... 40 0.33
AF302149_1(AF302149|pid:none) Gallus gallus tandem PH domain-con... 40 0.33
A59297(A59297) myosin X - mouse &AJ249706_1(AJ249706|pid:none) 40 0.33
AK074717_1(AK074717|pid:none) Homo sapiens cDNA FLJ90236 fis, cl... 40 0.33
EU194251_1(EU194251|pid:none) Sus scrofa cytohesin 2 mRNA, compl... 39 0.43
(Q2KI41) RecName: Full=Cytohesin-2; AltName: Full=PH, SEC7 and c... 39 0.43
AB013467_1(AB013467|pid:none) Mus musculus CLM2-A mRNA for cytoh... 39 0.43
AF079447_1(AF079447|pid:none) Dictyostelium discoideum myosin he... 39 0.43
BX571960_5(BX571960|pid:none) Zebrafish DNA sequence from clone ... 39 0.43
S71847(S71847)Ins P4-binding protein - human 39 0.43
AB013469_2(AB013469|pid:none) Mus musculus CLM2 gene for cytohes... 39 0.43
(P79114) RecName: Full=Myosin-X; AltName: Full=Unconventional my... 39 0.43
S58888(S58888)Ins P4-binding protein - human 39 0.43
FQ311430_184(FQ311430|pid:none) Sporisorium reilianum SRZ2 chrom... 39 0.43
(P63034) RecName: Full=Cytohesin-2; AltName: Full=PH, SEC7 and c... 39 0.43
JO841607_1(JO841607|pid:none) TSA: Amblyomma maculatum Am-59095 ... 39 0.56
AL161590_21(AL161590|pid:none) Arabidopsis thaliana DNA chromoso... 39 0.73
AE014134_3944(AE014134|pid:none) Drosophila melanogaster chromos... 38 0.96
AK129485_1(AK129485|pid:none) Mus musculus mRNA for mKIAA3020 pr... 38 0.96
BC098209_1(BC098209|pid:none) Mus musculus SET binding factor 1,... 38 0.96
BC157935_1(BC157935|pid:none) Mus musculus SET binding factor 1,... 38 0.96
AK076039_1(AK076039|pid:none) Mus musculus 10 days embryo whole ... 38 0.96
BC158013_1(BC158013|pid:none) Mus musculus SET binding factor 1,... 38 0.96
(Q6ZPE2) RecName: Full=Myotubularin-related protein 5; AltName: ... 38 0.96
FM207834_1(FM207834|pid:none) Angiostrongylus cantonensis partia... 38 0.96
AE014134_3945(AE014134|pid:none) Drosophila melanogaster chromos... 38 0.96
U93181_1(U93181|pid:none) Homo sapiens nuclear dual-specificity ... 38 1.2
AL096767_7(AL096767|pid:none) Human DNA sequence from clone RP4-... 38 1.2
BX248111_6(BX248111|pid:none) Zebrafish DNA sequence from clone ... 38 1.2
BC046169_1(BC046169|pid:none) Homo sapiens SET binding factor 1,... 38 1.2
BC059497_1(BC059497|pid:none) Danio rerio zgc:73134, mRNA (cDNA ... 38 1.2
JI173157_1(JI173157|pid:none) TSA: Ascaris suum ASCF_6238_1385 m... 37 1.6
A68114_1(A68114|pid:none) Sequence 23 from Patent WO9745538. 37 1.6
BC056915_1(BC056915|pid:none) Homo sapiens SET binding factor 1,... 37 1.6
AJ252065_1(AJ252065|pid:none) Arabidopsis thaliana partial mRNA ... 37 1.6
A68112_1(A68112|pid:none) Sequence 21 from Patent WO9745538. 37 1.6
AK296914_1(AK296914|pid:none) Homo sapiens cDNA FLJ59923 complet... 37 2.1
AY574952_1(AY574952|pid:none) Danio rerio cytohesin 1-like prote... 37 2.1
AB590939_1(AB590939|pid:none) Synthetic construct DNA, clone: pF... 37 2.1
BC074395_1(BC074395|pid:none) Xenopus laevis MGC84366 protein, m... 37 2.1
(Q15438) RecName: Full=Cytohesin-1; AltName: Full=PH, SEC7 and c... 37 2.1
AF125362_1(AF125362|pid:none) Homo sapiens cytohesin 1 gene, exo... 37 2.1
BT059690_1(BT059690|pid:none) Salmo salar clone ssal-rgf-001-101... 37 2.1
AF125362_2(AF125362|pid:none) Homo sapiens cytohesin 1 gene, exo... 37 2.1
CR847826_1(CR847826|pid:none) Zebrafish DNA sequence from clone ... 37 2.1
AK158216_1(AK158216|pid:none) Mus musculus adult inner ear cDNA,... 37 2.1
AB013464_1(AB013464|pid:none) Mus musculus CLM1-A mRNA for cytoh... 37 2.1
CP000139_2156(CP000139|pid:none) Bacteroides vulgatus ATCC 8482,... 37 2.8
CP003046_896(CP003046|pid:none) Rhodospirillum rubrum F11, compl... 37 2.8
AE004439_1857(AE004439|pid:none) Pasteurella multocida subsp. mu... 37 2.8
CP003022_1387(CP003022|pid:none) Pasteurella multocida 36950, co... 37 2.8
CP000230_864(CP000230|pid:none) Rhodospirillum rubrum ATCC 11170... 37 2.8
(Q55E58) RecName: Full=Probable serine/threonine-protein kinase ... 36 3.6
AK169584_1(AK169584|pid:none) Mus musculus 2 days neonate thymus... 36 3.6
BT096181_1(BT096181|pid:none) Soybean clone JCVI-FLGm-20B15 unkn... 36 3.6
FR823391_3(FR823391|pid:none) Neospora caninum Liverpool complet... 36 3.6
AK145745_1(AK145745|pid:none) Mus musculus blastocyst blastocyst... 36 3.6
AY170918_1(AY170918|pid:none) Dictyostelium discoideum pats1 gen... 36 3.6
EF214918_1(EF214918|pid:none) Callithrix jacchus clone D16-48.4_... 36 3.6
AF163255_1(AF163255|pid:none) Mus musculus adaptor protein DAPP1... 36 3.6
(Q9UN19) RecName: Full=Dual adapter for phosphotyrosine and 3-ph... 36 4.7
BC123550_1(BC123550|pid:none) Bos taurus dual adaptor of phospho... 36 4.7
AK295151_1(AK295151|pid:none) Homo sapiens cDNA FLJ61590 partial... 36 4.7
CP000387_690(CP000387|pid:none) Streptococcus sanguinis SK36, co... 36 4.7
BC084161_1(BC084161|pid:none) Xenopus laevis hypothetical LOC495... 36 4.7
CU928169_573(CU928169|pid:none) Kluyveromyces thermotolerans str... 36 4.7
AE014297_2644(AE014297|pid:none) Drosophila melanogaster chromos... 35 6.2
FR668087_128(FR668087|pid:none) Mycoplasma leachii 99/014/6 comp... 35 8.1
AB092812_1(AB092812|pid:none) Rattus norvegicus mRNA for SKAP55 ... 35 8.1
CP003009_2086(CP003009|pid:none) Thielavia terrestris NRRL 8126 ... 35 8.1
FR824104_8(FR824104|pid:none) Albugo laibachii Nc14, genomic con... 35 8.1
AJ010592_156(AJ010592|pid:none) Guillardia theta DNA for complet... 35 8.1
(Q55FJ0) RecName: Full=Probable inactive serine/threonine-protei... 35 8.1
CP002108_317(CP002108|pid:none) Mycoplasma leachii PG50 clone MU... 35 8.1
AC116963_26(AC116963|pid:none) Dictyostelium discoideum chromoso... 35 8.1
FR824069_42(FR824069|pid:none) Albugo laibachii Nc14, genomic co... 35 8.1
AL596062_4(AL596062|pid:none) Mouse DNA sequence from clone RP23... 35 8.1
(Q6XHB2) RecName: Full=Probable serine/threonine-protein kinase ... 35 8.1
AK138030_1(AK138030|pid:none) Mus musculus 16 days neonate thymu... 35 8.1
>AY232268_1(AY232268|pid:none) Dictyostelium discoideum putative
protein Roco6 (roco6) gene, complete cds.
Length = 2147
Score = 751 bits (1939), Expect = 0.0
Identities = 363/376 (96%), Positives = 363/376 (96%)
Frame = +3
Query: 3 IFREQKLHPGPIRSLALVNQEDIWSAGGIGPQQSTIRIWNAWRFNLDDQSGTKSDFITKK 182
IFREQKLHPGPIRSLALVNQEDIWSAGGIGPQQSTIRIWNAWRFNLDDQSGTKSDFITKK
Sbjct: 1772 IFREQKLHPGPIRSLALVNQEDIWSAGGIGPQQSTIRIWNAWRFNLDDQSGTKSDFITKK 1831
Query: 183 GRGGSTFGRKSWRLRWFVLSRFDKTLKYYSKQTDKEPSCSLILEGAWLEEISPPGYKVSL 362
GRGGSTFGRKSWRLRWFVLSRFDKTLKYYSKQTDKEPSCSLILEGAWLEEISPPGYKVSL
Sbjct: 1832 GRGGSTFGRKSWRLRWFVLSRFDKTLKYYSKQTDKEPSCSLILEGAWLEEISPPGYKVSL 1891
Query: 363 HLIHPEKRTXXXXXXXXXXXXXWLTAINRVINQNIPLYEIALGKQMTSGSENDYITNLLS 542
HLIHPEKRT WLTAINRVINQNIPLYEIALGKQMTSGSENDYITNLLS
Sbjct: 1892 HLIHPEKRTMEMEFKSESEKSSWLTAINRVINQNIPLYEIALGKQMTSGSENDYITNLLS 1951
Query: 543 VGPNVWVSLKETPSILVYNVKSKELVTKISLNDDQSSDQWGKTGAVNMMLVNNFVWITGG 722
VGPNVWVSLKETPSILVYNVKSKELVTKISLNDDQSSDQWGKTGAVNMMLVNNFVWITGG
Sbjct: 1952 VGPNVWVSLKETPSILVYNVKSKELVTKISLNDDQSSDQWGKTGAVNMMLVNNFVWITGG 2011
Query: 723 SKLTQIDSQSYQLLEVHGNHYSKPITSMALVEKNVWISCEDESLSVWDGDTGSFIRKVGS 902
SKLTQIDSQSYQLLEVHGNHYSKPITSMALVEKNVWISCEDESLSVWDGDTGSFIRKVGS
Sbjct: 2012 SKLTQIDSQSYQLLEVHGNHYSKPITSMALVEKNVWISCEDESLSVWDGDTGSFIRKVGS 2071
Query: 903 PIGSPTKPTVYTKLLYFSGYVWACTQGSIHIYCIHSLTCKKKVESKNHPNSIVDLIKVFQ 1082
PIGSPTKPTVYTKLLYFSGYVWACTQGSIHIYCIHSLTCKKKVESKNHPNSIVDLIKVFQ
Sbjct: 2072 PIGSPTKPTVYTKLLYFSGYVWACTQGSIHIYCIHSLTCKKKVESKNHPNSIVDLIKVFQ 2131
Query: 1083 QTVWSCCGTNNVCIWS 1130
QTVWSCCGTNNVCIWS
Sbjct: 2132 QTVWSCCGTNNVCIWS 2147
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 5349213
Number of Hits to DB: 3,403,872,885
Number of extensions: 72988718
Number of successful extensions: 159705
Number of sequences better than 10.0: 115
Number of HSP's gapped: 159641
Number of HSP's successfully gapped: 115
Length of query: 387
Length of database: 1,732,582,204
Length adjustment: 134
Effective length of query: 253
Effective length of database: 1,015,787,662
Effective search space: 256994278486
Effective search space used: 256994278486
Neighboring words threshold: 12
Window for multiple hits: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
S2: 32 (16.9 bits)
Dictyostelium discoideum cDNA Project Home