Dictyostelium discoideum cDNA Clone SLG288

Size:		1163
3' sequence:	TM980610
5' sequence:	TM990119
Whole insert?:	Y
Accession #:	
Remarks:	*

Sequence SLG288

AAATTTTCCG TGAACAAAAA TTACATCCAG GTCCAATTAG ATCATTGGCA
TTGGTAAATC AAGAAGATAT TTGGTCAGCA GGTGGTATTG GTCCACAACA
AAGTACAATT AGAATTTGGA ATGCTTGGCG TTTTAATCTT GATGATCAAT
CTGGTACAAA ATCTGATTTT ATCACTAAAA AAGGTAGAGG TGGTTCAACA
TTTGGTAGAA AATCTTGGAG ATTACGTTGG TTTGTCCTAT CAAGATTTGA
TAAAACCTTG AAATACTATA GTAAACAAAC TGATAAAGAA CCAAGTTGTT
CACTCATTTT AGAGGGTGCT TGGTTAGAAG AAATTAGTCC ACCAGGTTAT
AAAGTTAGTC TTCATTTAAT TCATCCAGAA AAAAGAACAA TGGAAATGGA
ATTTAAGAGT GAATCTGAAA AATCATCTTG GCTAACTGCA ATCAATCGTG
TTATCAATCA AAATATACCA CTCTATGAAA TTGCACTTGG TAAACAAATG
ACAAGTGGTA GTGAAAATGA TTATATCACA AATTTACTAT CGGTTGGTCC
AAATGTTTGG GTATCACTTA AAGAAACACC ATCAATTTTG GTTTATAATG
TAAAGAGTAA AGAATTGGTT ACAAAAATCT CTTTAAATGA TGATCAATCC
AGTGATCAAT GGGGTAAAAC TGGTGCTGTA AATATGATGT TGGTTAATAA
TTTCGTTTGG ATAACTGGTG GTTCAAAATT GACTCAAATT GATTCACAAT
CTTATCAACT CTTGGAAGTA CATGGAAATC ATTATTCAAA ACCAATCACC
TCAATGGCAT TGGTTGAAAA AAATGTTTGG ATCTCTTGTG AAGATGAATC
ACTTTCAGTT TGGGATGGTG ATACTGGTTC CTTTATTAGA AAAGTTGGTT
CTCCAATTGG TTCACCAACT AAGCCAACCG TTTACACTAA ACTTTTATAT
TTCAGTGGTT ATGTTTGGGC TTGTACTCAA GGTTCAATTC ATATTTATTG
TATTCATTCA TTAACTTGTA AAAAGAAAGT TGAATCAAAA AATCATCCAA
ATAGTATTGT AGATTTAATT AAAGTTTTCC AACAAACTGT TTGGTCATGT
TGTGGTACAA ATAATGTTTG TATTTGGTCT TAAACAATAA ATTTGAATTT
ATTTAAAAAA ATA

Translated Amino Acid Sequence SLG288

IFREQKLHPGPIRSLALVNQEDIWSAGGIGPQQSTIRIWNAWRFNLDDQSGTKSDFITKK
GRGGSTFGRKSWRLRWFVLSRFDKTLKYYSKQTDKEPSCSLILEGAWLEEISPPGYKVSL
HLIHPEKRTMEMEFKSESEKSSWLTAINRVINQNIPLYEIALGKQMTSGSENDYITNLLS
VGPNVWVSLKETPSILVYNVKSKELVTKISLNDDQSSDQWGKTGAVNMMLVNNFVWITGG
SKLTQIDSQSYQLLEVHGNHYSKPITSMALVEKNVWISCEDESLSVWDGDTGSFIRKVGS
PIGSPTKPTVYTKLLYFSGYVWACTQGSIHIYCIHSLTCKKKVESKNHPNSIVDLIKVFQ
QTVWSCCGTNNVCIWS*tinlnlfkki

Homology SLG288 vs CSM-cDNA

Sequences producing significant alignments:                      (bits) Value


SLG288 (SLG288Q) /CSM/SL/SLG2-D/SLG288Q.Seq.d/                       2246   0.0
SFF718 (SFF718Q) /CSM/SF/SFF7-A/SFF718Q.Seq.d/                       2169   0.0
VHK434 (VHK434Q) /CSM/VH/VHK4-B/VHK434Q.Seq.d/                       1421   0.0
CHR483 (CHR483Q) /CSM/CH/CHR4-D/CHR483Q.Seq.d/                       1409   0.0
AHD725 (AHD725Q) /CSM/AH/AHD7-B/AHD725Q.Seq.d/                       1400   0.0
VHA316 (VHA316Q) /CSM/VH/VHA3-A/VHA316Q.Seq.d/                       1396   0.0
AHO203 (AHO203Q) /CSM/AH/AHO2-A/AHO203Q.Seq.d/                       1366   0.0
SHK340 (SHK340Q) /CSM/SH/SHK3-B/SHK340Q.Seq.d/                       1342   0.0
AHE353 (AHE353Q) /CSM/AH/AHE3-C/AHE353Q.Seq.d/                       1336   0.0
AHC866 (AHC866Q) /CSM/AH/AHC8-C/AHC866Q.Seq.d/                       1334   0.0

Homology SLG288 vs DNA

Sequences producing significant alignments:                  (bits) Value  N


(AY232268) Dictyostelium discoideum putative protein Roco6 (...  1618   0.0    2
(AU061839) Dictyostelium discoideum slug cDNA, clone SLG288.     1213   0.0    1
(BJ385992) Dictyostelium discoideum cDNA clone:ddc56f22, 3' ...   850   0.0    4
(BJ442894) Dictyostelium discoideum cDNA clone:ddv51d10, 3' ...   831   0.0    3
(BJ356039) Dictyostelium discoideum cDNA clone:dda59e02, 3' ...   831   0.0    3
(BJ349969) Dictyostelium discoideum cDNA clone:dda38b07, 3' ...   825   0.0    4
(BJ436452) Dictyostelium discoideum cDNA clone:ddv31p03, 3' ...   821   0.0    4
(BJ352843) Dictyostelium discoideum cDNA clone:dda48i05, 3' ...   821   0.0    4
(BJ398331) Dictyostelium discoideum cDNA clone:dds12d05, 3' ...   791   0.0    3
(AU275183) Dictyostelium discoideum gamete cDNA clone:FC-IC1...   767   0.0    2

Homology SLG288 vs Protein

Sequences producing significant alignments:                      (bits) Value


AY232268_1(AY232268|pid:none) Dictyostelium discoideum putative ...   751   0.0
(Q54J98) RecName: Full=Rho GTPase-activating protein gacX; AltNa...    49   4e-04
BX005083_7(BX005083|pid:none) Zebrafish DNA sequence from clone ...    45   0.010
BC135618_1(BC135618|pid:none) Xenopus tropicalis hypothetical pr...    44   0.022
BC161647_1(BC161647|pid:none) Xenopus tropicalis hypothetical pr...    44   0.022
BC166132_1(BC166132|pid:none) Xenopus tropicalis cDNA clone IMAG...    44   0.022
CU074274_1(CU074274|pid:none) Podospora anserina genomic DNA, NW...    44   0.022
(Q80YW0) RecName: Full=Cytohesin-4; AltName: Full=PH, SEC7 and c...    42   0.082
AK304453_1(AK304453|pid:none) Homo sapiens cDNA FLJ54256 complet...    42   0.082
(Q8MY12) RecName: Full=Myosin heavy chain kinase C;          Sho...    42   0.082

Homology SLG288 vs Genome