Homology SLE313 vs DNA
Query= SLE313 (SLE313Q) /CSM/SL/SLE3-A/SLE313Q.Seq.d/
(692 letters)
Database: ddbj_B
98,226,423 sequences; 98,766,808,389 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value N
(BJ357378) Dictyostelium discoideum cDNA clone:dda63j10, 3' ... 1199 0.0 3
(AU061452) Dictyostelium discoideum slug cDNA, clone SLE313. 1193 0.0 1
(AU034771) Dictyostelium discoideum slug cDNA, clone SLE313. 1154 0.0 2
(C83895) Dictyostelium discoideum slug cDNA, clone SSA537. 874 0.0 2
(BJ338887) Dictyostelium discoideum cDNA clone:dda63j10, 5' ... 835 0.0 1
(BJ344243) Dictyostelium discoideum cDNA clone:dda18j22, 3' ... 630 e-176 1
(AU271684) Dictyostelium discoideum gamete cDNA clone:FC-IC0... 192 1e-44 1
(BJ432799) Dictyostelium discoideum cDNA clone:ddv19i19, 3' ... 68 1e-33 6
(BJ339794) Dictyostelium discoideum cDNA clone:dda10l12, 3' ... 68 1e-28 5
(BJ377082) Dictyostelium discoideum cDNA clone:ddc22e14, 3' ... 68 1e-21 5
(C93368) Dictyostelium discoideum slug cDNA, clone SSM708. 68 3e-19 4
(AU039000) Dictyostelium discoideum slug cDNA, clone SSM258. 68 2e-17 2
(AU272304) Dictyostelium discoideum gamete cDNA clone:FC-IC1... 52 4e-08 2
(AU272303) Dictyostelium discoideum gamete cDNA clone:FC-IC1... 52 4e-08 2
(CU694464) Zebrafish DNA sequence *** SEQUENCING IN PROGRESS... 48 0.44 1
(CT670778) Danio rerio EST, clone ZF_mu_169m19 5'. 48 0.44 1
(AM459595) Vitis vinifera contig VV78X179488.2, whole genome... 38 0.53 2
(EG237542) MSAM152212_2475_0968 LCM-dissected maize inbred l... 38 0.66 2
(EG106201) MSAM180067_1296_2807 LCM-dissected maize inbred l... 38 0.66 2
(AM481392) Vitis vinifera contig VV78X145211.7, whole genome... 36 1.2 2
(BX469919) Zebrafish DNA sequence from clone DKEY-15J7 in li... 36 1.6 4
(CU861884) Zebrafish DNA sequence from clone CH1073-108O16 i... 46 1.7 1
(U40415) Caenorhabditis elegans cosmid K02G10, complete sequ... 46 1.7 1
(AL353757) Human DNA sequence from clone RP11-439I8 on chrom... 46 1.7 1
(AL132639) Human chromosome 14 DNA sequence BAC R-407N17 of ... 46 1.7 1
(AC109803) Homo sapiens chromosome 3 clone RP11-37F14, WORKI... 46 1.7 1
(AC109554) Rattus norvegicus clone CH230-331D3, *** SEQUENCI... 46 1.7 1
(AC107510) Rattus norvegicus clone CH230-138J6, *** SEQUENCI... 46 1.7 1
(AC221091) Bos taurus clone CH240-392N5, WORKING DRAFT SEQUE... 46 1.7 1
(AC016150) Homo sapiens chromosome X clone RP11-503D9, WORKI... 46 1.7 1
(AC011987) Homo sapiens clone RP11-19B13, WORKING DRAFT SEQU... 46 1.7 1
(AM738664) Cucumis melo subsp. melo EST, clone 15d_01-E02-M13R. 46 1.7 1
(AE001437) Clostridium acetobutylicum ATCC 824, complete gen... 46 1.7 1
(AM441605) Vitis vinifera contig VV78X016871.6, whole genome... 36 2.4 2
(AC161402) Medicago truncatula chromosome 2 BAC clone mte1-6... 36 2.5 3
(CU464142) Pig DNA sequence *** SEQUENCING IN PROGRESS *** f... 44 2.8 2
(CG064226) PUIBJ11TB ZM_0.6_1.0_KB Zea mays genomic clone ZM... 38 3.4 2
(AM426262) Vitis vinifera contig VV78X023113.11, whole genom... 36 3.6 2
(AM459030) Vitis vinifera, whole genome shotgun sequence, co... 38 3.7 2
(BV600862) S217P60177FE2.T0 Noemie Pan troglodytes troglodyt... 40 3.8 2
(EI206756) MUGQ_CH252P207F07Sp6_GL496_028 CHORI-252 Vervet M... 40 4.2 2
(BX005012) Zebrafish DNA sequence from clone DKEY-11P23 in l... 34 4.4 5
(BW639217) Dugesia ryukyuensis mRNA, clone: Dr_sW_014_A07, 5... 32 4.5 2
(AC117176) Dictyostelium discoideum chromosome 2 map 5018074... 36 4.6 6
(AP009012) Bombyx mori genomic DNA, chromosome 14, BAC clone... 32 6.7 8
(CT573457) Zebrafish DNA sequence from clone CH211-214A19 in... 44 6.8 1
(AC197612) MACACA MULATTA BAC clone CH250-9K4 from chromosom... 44 6.8 1
(EU450800) Glycine max NB-LRR type disease resistance protei... 44 6.8 1
(AM450098) Vitis vinifera contig VV78X228824.4, whole genome... 44 6.8 1
(EA275289) Sequence 182 from patent US 7256323. 44 6.8 1
(AX346803) Sequence 1874 from Patent WO0200928. 44 6.8 1
(AC087731) Felis catus clone RP86-459O8, complete sequence. 44 6.8 1
(AC124078) Homo sapiens chromosome 11, clone RP1-59M18, comp... 44 6.8 1
(AC004582) Human Chromosome 11p14.3 PAC clone pDJ59m18, comp... 44 6.8 1
(AC158092) Bos taurus clone CH240-48B9, WORKING DRAFT SEQUEN... 44 6.8 1
(AC152850) Neofelis nebulosa clone CH87-155L14, WORKING DRAF... 44 6.8 1
(AC141728) Apis mellifera clone CH224-58F24, WORKING DRAFT S... 44 6.8 1
(AC141724) Apis mellifera clone CH224-57G4, *** SEQUENCING I... 44 6.8 1
(AC131824) Rattus norvegicus clone CH230-368D12, *** SEQUENC... 44 6.8 1
(AC112384) Rattus norvegicus clone CH230-30L4, *** SEQUENCIN... 44 6.8 1
(AC068212) Homo sapiens chromosome 11 clone RP11-622M18 map ... 44 6.8 1
(AC221903) Bos taurus clone CH240-378J3, WORKING DRAFT SEQUE... 44 6.8 1
(ER453007) 1092963857802 Global-Ocean-Sampling_GS-35-01-01-1... 44 6.8 1
(ER440041) 1092963809802 Global-Ocean-Sampling_GS-35-01-01-1... 44 6.8 1
(EJ203978) 1092344320935 Global-Ocean-Sampling_GS-27-01-01-1... 44 6.8 1
(DU009293) 241088 Tomato MboI BAC Library Solanum lycopersic... 44 6.8 1
(CZ862004) OC__Ba0255N09.f OC__Ba Oryza coarctata genomic cl... 44 6.8 1
(CZ774580) OC__Ba0133D22.f OC__Ba Oryza coarctata genomic cl... 44 6.8 1
(CZ696652) OC__Ba0010F05.f OC__Ba Oryza coarctata genomic cl... 44 6.8 1
(CZ538247) SRAA-aad18d07.b1 Strongyloides ratti whole genome... 44 6.8 1
(CT178938) Sus scrofa genomic clone CH242-54G22, genomic sur... 44 6.8 1
(BZ440954) BONNF87TR BO_1.6_2_KB_tot Brassica oleracea genom... 44 6.8 1
(BZ018999) oek44a04.b1 B.oleracea002 Brassica oleracea genom... 44 6.8 1
(EL922603) NY4Th2_75_F05.b1_A039 NY4 theronts Ichthyophthiri... 44 6.8 1
(EE303313) AGENCOURT_85413746 NIH_ZGC_27 Danio rerio cDNA cl... 44 6.8 1
(EE302575) AGENCOURT_85392624 NIH_ZGC_28 Danio rerio cDNA cl... 44 6.8 1
(BM101997) fv11c01.x1 zebrafish adult brain Danio rerio cDNA... 44 6.8 1
(BX548174) Prochlorococcus marinus MED4 complete genome. 44 6.8 1
(AE017126) Prochlorococcus marinus subsp. marinus str. CCMP1... 44 6.8 1
(CR933819) Zebrafish DNA sequence *** SEQUENCING IN PROGRESS... 34 7.1 5
(AC173384) Bos taurus clone CH240-527K15, WORKING DRAFT SEQU... 40 7.2 5
(CT027835) Zebrafish DNA sequence from clone CH211-66E18 in ... 36 7.5 3
(AC209369) Zea mays chromosome 2 clone CH201-237D8; ZMMBBc02... 40 7.7 3
(CU463085) Pig DNA sequence *** SEQUENCING IN PROGRESS *** f... 36 8.7 3
(AL672119) Mouse DNA sequence from clone RP23-437A4 on chrom... 34 9.3 5
(EE772719) 020709OFM1028016HT OFM1 Ovis aries cDNA, mRNA seq... 32 9.3 3
(EE851390) 030729OSPA2015031HT OSPA Ovis aries cDNA, mRNA se... 32 9.5 3
>(BJ357378) Dictyostelium discoideum cDNA clone:dda63j10, 3' end,
single read.
Length = 735
Score = 1199 bits (605), Expect(3) = 0.0
Identities = 610/612 (99%)
Strand = Plus / Minus
Query: 1 ataaaatcaatgacgcttgccaattggctttcccacgttatcctaatgataacccattat 60
|||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||
Sbjct: 686 ataaaatcaatgacgcttgccaattggctttcccacgttatcntaatgataacccattat 627
Query: 61 cagtaccatatcaacaaaatgttttagattgtccaccaactctaacttgtagcaatacaa 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 626 cagtaccatatcaacaaaatgttttagattgtccaccaactctaacttgtagcaatacaa 567
Query: 121 cattaagtatttatttattcaatactactgtccatgactttaatgttaaatgtaagaatg 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 566 cattaagtatttatttattcaatactactgtccatgactttaatgttaaatgtaagaatg 507
Query: 181 caccaacttgtggtgatttatcaacttgtgatccatccattcttaccgaagttatgtctt 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 506 caccaacttgtggtgatttatcaacttgtgatccatccattcttaccgaagttatgtctt 447
Query: 241 gtgattgggtagatgttagttctgttaattcttgctctcaaggtggttgccaatacaacc 300
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 446 gtgattgggtagatgttagttctgttaattcttgctctcaaggtggttgccaatacaacc 387
Query: 301 aacaagttgtaaatactacaaaacaaattatgcaactttatgatatcttaacttcactca 360
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 386 aacaagttgtaaatactacaaaacaaattatgcaactttatgatatcttaacttcactca 327
Query: 361 ctactctttggactgataaagttgtaccattaattaaatgttcatatcttatgccattca 420
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 326 ctactctttggactgataaagttgtaccattaattaaatgttcatatcttatgccattca 267
Query: 421 tagatgaagttcaaaatattgtttgcgttgatgaagttaattctttagatctcttaatag 480
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 266 tagatgaagttcaaaatattgtttgcgttgatgaagttaattctttagatctcttaatag 207
Query: 481 ctccaactgcagtgtttgccattttattaactggacttggtattactggtatcttaggaa 540
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 206 ctccaactgcagtgtttgccattttattaactggacttggtattactggtatcttaggaa 147
Query: 541 gtaagagatttaattccaaataccgtgtaaagggaagtagatcagcttaattccttgatt 600
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 146 gtaagagatttaattccaaataccgtgtaaagggaagtagatcagcttaattccttgatt 87
Query: 601 atcaatttttta 612
||||| ||||||
Sbjct: 86 atcaagttttta 75
Score = 42.1 bits (21), Expect(3) = 0.0
Identities = 21/21 (100%)
Strand = Plus / Minus
Query: 632 caaaatcgactgttaaatatt 652
|||||||||||||||||||||
Sbjct: 55 caaaatcgactgttaaatatt 35
Score = 38.2 bits (19), Expect(3) = 0.0
Identities = 19/19 (100%)
Strand = Plus / Minus
Query: 658 aacttaaataaagtttatt 676
|||||||||||||||||||
Sbjct: 30 aacttaaataaagtttatt 12
Lambda K H
1.37 0.711 1.31
Matrix: blastn matrix:1 -3
Number of Sequences: 98226423
Number of Hits to DB: 830,694,411
Number of extensions: 58714340
Number of successful extensions: 4627296
Number of sequences better than 10.0: 88
Length of query: 692
Length of database: 98,766,808,389
Length adjustment: 24
Effective length of query: 668
Effective length of database: 96,409,374,237
Effective search space: 64401461990316
Effective search space used: 64401461990316
X1: 11 (21.8 bits)
S2: 22 (44.1 bits)
Dictyostelium discoideum cDNA Project Home