Dictyostelium discoideum cDNA Clone SLE252

Size:		1.2k
3' sequence:	TM980519
5' sequence:	*
Whole insert?:	*
Accession #:	
Remarks:	*

Sequence SLE252

---------- CCAGGTCTTA AAGTTGTTGC ACCATGGAGT GCTGCTGATC
ATAGAGGTTT ATTAAAATCA GCAATTCGTG ATGATAATCC AGTTGTTTAT
TTAGAGAGTG AATTACTTTA CAATTATAAA TTTGATTTAT CAGATCAAGA
ACAAGATAAA GAATACCTTG TTCCAATTGG TAAAGCAAAA GTTGAAAGAG
AAGGTAAAGA TGTTACAATT GTTGGTTTCT CTAGAATCGT TAGTAACTGT
ATGGAAGCTG CTGAAATACT TGCCAAAGAA GGTATCTCTG CTGAAGTTAT
CAATTTACGT ACCATTCGTC CAATTGATGC TGAAACCATT GTAAATTCAC
TCAAAAAAAA CAAATAAATT AGTTACCGTT GAAGAAGGTT GGGCACAATC
TGGTATTGGT GCTGAAATCT CTGCATTAAT GATGGAACAT GCTTTTGATT
ATTTAGATGC CCCAATTGAA AGAATTTGTG GTGCTGATGT TCCAATGCCA
TATGCTTCAA ACTTGGAAAA TGCTGCTATG GTCCAAACTC AAAACATTGT
CAATGCTGCT AAAAGAGTTA CTCAAAGAAA TAAATAAATT TAAAAAAAAA
AAAGTCTTGA ATTAATTTTT TCTCACGAAA AAAAAGAAAT AATGATAAAG
AAAAAATA

Translated Amino Acid Sequence SLE252

---GLKVVAPWSAADHRGLLKSAIRDDNPVVYLESELLYNYKFDLSDQEQDKEYLVPIGK
AKVEREGKDVTIVGFSRIVSNCMEAAEILAKEGISAEVINLRTIRPIDAETIVNSLKKNK
*isyr*rrlgtiwywc*nlcindgtcf*lfrcpn*knlwc*csnaicfklgkccygpnsk
hcqcc*ksyskk*inlkkkks*inffsrkkrnndkeki

Homology SLE252 vs CSM-cDNA

Sequences producing significant alignments:                      (bits) Value


SLE252 (SLE252Q) /CSM/SL/SLE2-C/SLE252Q.Seq.d/                       1118   0.0
FC-BQ09 (FC-BQ09Q) /CSM/FC/FC-BQ/FC-BQ09Q.Seq.d/                     1102   0.0
FC-BN12 (FC-BN12Q) /CSM/FC/FC-BN/FC-BN12Q.Seq.d/                     1065   0.0
FC-537 (FC-537Q) /CSM/CG/CG-FC/FC-537Q.Seq.d/                        1065   0.0
VFO292 (VFO292Q) /CSM/VF/VFO2-D/VFO292Q.Seq.d/                       1045   0.0
VHB632 (VHB632Q) /CSM/VH/VHB6-B/VHB632Q.Seq.d/                        860   0.0
VFK807 (VFK807Q) /CSM/VF/VFK8-A/VFK807Q.Seq.d/                        854   0.0
SSC259 (SSC259Q) /CSM/SS/SSC2-C/SSC259Q.Seq.d/                        850   0.0
SSH590 (SSH590Q) /CSM/SS/SSH5-D/SSH590Q.Seq.d/                        827   0.0
CFI872 (CFI872Q) /CSM/CF/CFI8-C/CFI872Q.Seq.d/                        819   0.0

Homology SLE252 vs DNA

Sequences producing significant alignments:                  (bits) Value  N


(AU034732) Dictyostelium discoideum slug cDNA, clone SLE252.      678   0.0    2
(AU284931) Dictyostelium discoideum gamete cDNA clone:FC-BQ0...   636   0.0    3
(AC114263) Dictyostelium discoideum chromosome 2 map 215673-...   678   0.0    3
(AU284858) Dictyostelium discoideum gamete cDNA clone:FC-BN1...   678   0.0    4
(BJ436078) Dictyostelium discoideum cDNA clone:ddv29g24, 3' ...   678   0.0    3
(BJ418913) Dictyostelium discoideum cDNA clone:ddv34o08, 5' ...   678   0.0    2
(C84019) Dictyostelium discoideum slug cDNA, clone SSC259.        458   0.0    2
(AU038344) Dictyostelium discoideum slug cDNA, clone SSH590.      458   0.0    2
(BJ375440) Dictyostelium discoideum cDNA clone:ddc18p18, 3' ...   523   0.0    2
(BJ433496) Dictyostelium discoideum cDNA clone:ddv22f06, 3' ...   492   0.0    2

Homology SLE252 vs Protein

Sequences producing significant alignments:                      (bits) Value


(Q86HX0) RecName: Full=Pyruvate dehydrogenase E1 component subun...   228   4e-98
AP010946_1520(AP010946|pid:none) Azospirillum sp. B510 DNA, comp...   152   8e-60
EF144284_1(EF144284|pid:none) Populus trichocarpa clone PX0015_F...   147   5e-58
AP007255_2317(AP007255|pid:none) Magnetospirillum magneticum AMB...   144   4e-57
BT062874_1(BT062874|pid:none) Zea mays full-length cDNA clone ZM...   146   6e-57
AK362112_1(AK362112|pid:none) Hordeum vulgare subsp. vulgare mRN...   147   7e-57
AK353615_1(AK353615|pid:none) Hordeum vulgare subsp. vulgare mRN...   143   2e-56
AY628685_1(AY628685|pid:none) Nyctotherus ovalis hydrogenosomal ...   140   2e-56
AY628687_1(AY628687|pid:none) Nyctotherus ovalis hydrogenosomal ...   142   2e-56
AK104686_1(AK104686|pid:none) Oryza sativa Japonica Group cDNA c...   144   4e-56

Homology SLE252 vs Genome