Homology SLD172 vs Protein
Query= SLD172 (SLD172Q) /CSM/SL/SLD1-C/SLD172Q.Seq.d/
(808 letters)
Database: nrp_B
5,349,213 sequences; 1,732,582,204 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
JI166157_1(JI166157|pid:none) TSA: Ascaris suum ASCF_1652_3074 m... 40 0.14
CR380955_105(CR380955|pid:none) Candida glabrata strain CBS138 c... 36 2.7
FN538970_2985(FN538970|pid:none) Clostridium difficile CD196 com... 35 4.5
(Q54HT7) RecName: Full=Arrestin domain-containing protein F; 35 4.5
CP002999_2169(CP002999|pid:none) Muricauda ruestringensis DSM 13... 35 4.5
(Q20681) RecName: Full=BTB and MATH domain-containing protein 38... 35 4.5
AL844506_148(AL844506|pid:none) Plasmodium falciparum 3D7 chromo... 35 5.9
(B2TIU0) RecName: Full=2-C-methyl-D-erythritol 2,4-cyclodiphosph... 35 5.9
AE015928_4278(AE015928|pid:none) Bacteroides thetaiotaomicron VP... 35 5.9
FM992688_1082(FM992688|pid:none) Candida dubliniensis CD36 chrom... 34 7.7
CR940348_925(CR940348|pid:none) Theileria annulata strain Ankara... 34 7.7
BC061819_1(BC061819|pid:none) Rattus norvegicus mannosidase, alp... 34 7.7
AL844506_138(AL844506|pid:none) Plasmodium falciparum 3D7 chromo... 34 7.7
AL929357_53(AL929357|pid:none) Plasmodium falciparum strain 3D7,... 34 7.7
>JI166157_1(JI166157|pid:none) TSA: Ascaris suum ASCF_1652_3074 mRNA
sequence.
Length = 1000
Score = 40.0 bits (92), Expect = 0.14
Identities = 26/85 (30%), Positives = 50/85 (58%), Gaps = 5/85 (5%)
Frame = +1
Query: 361 QHKFQIYQGQDSSYMSSKSFMLKPLPEFIHILSMERSGPRSIKLRIHNIENNNQS----- 525
Q + YQ +++ + S + + LP+ ++I+++E+ +S+ LR+ +I N++
Sbjct: 869 QSSIEQYQ---AAFNTVYSGLTRALPDHVNIVTLEQWTGKSLLLRLEHIFQNSEDRLLSQ 925
Query: 526 PITFDLNGLFSFIKSIKSIKEYNLS 600
PIT DL GLF+ I S++E NL+
Sbjct: 926 PITIDLKGLFTSFNVI-SLEELNLA 949
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 5349213
Number of Hits to DB: 1,542,781,471
Number of extensions: 25515558
Number of successful extensions: 67425
Number of sequences better than 10.0: 14
Number of HSP's gapped: 67392
Number of HSP's successfully gapped: 14
Length of query: 269
Length of database: 1,732,582,204
Length adjustment: 130
Effective length of query: 139
Effective length of database: 1,037,184,514
Effective search space: 144168647446
Effective search space used: 144168647446
Neighboring words threshold: 12
Window for multiple hits: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
S2: 32 (16.9 bits)
Dictyostelium discoideum cDNA Project Home