<List of Series> <Series: SLD1-C> <Clone: SLD172> <SEQ> <Translated> <CSM> <DNA> <Protein> <Genome> <PSORT> <MOTIF>
Dictyostelium discoideum cDNA Clone SLD172
Dictyostelium discoideum cDNA Project Home
Size: 1.6k
3' sequence: TS980608
5' sequence: TS990122
Whole insert?: *
Accession #:
Remarks: *
Sequence SLD172
CAAGAAGATT TTTTAAATGA AATTGAAATT GATTGTAGTC CAAGAAGTGA
TTTTAAAAGT GATCAATCTG ATGATCATAA AGAATTCATT CAAATTGATT
TCCCTGCAAA ATTAAAACCA TTCTCAAGCA AACTTTATTA TTTAAAAAGA
AAATCAAATC CAAATAAATC AAATTGGGTA TTACCAAAAA CTAATCATTT
CAATTCAATT GAAAATTCAA TTTATACTGC AAATTTAGAT GAAA------
----AATTAA TGCACGTTTT GAATGTTATT TAGATGAAGT ACCATCAAAT
TCACAACAAT CGAATGGTGG TGGTGGTGGT GATGATATTA GAAAACAATC
AATTAATTAT CAACATAAAT TCCAAATTTA TCAAGGTCAA GATTCTTCTT
ATATGTCTTC AAAATCTTTT ATGTTAAAAC CATTACCAGA GTTTATTCAT
ATTCTATCAA TGGAAAGATC TGGTCCTCGT TCAATTAAAT TAAGAATTCA
TAATATTGAA AATAATAATC AATCTCCAAT CACTTTTGAT TTAAATGGCT
TATTCTCTTT TATCAAATCA ATTAAATCAA TTAAAGAATA TAATTTATCT
TTAATCAATA GATTCGTTGA TAATAATATT GATAATATTA TTTCTTCTCA
TCGTTCAATT GTTGGAAAAA ATCTTTTCCC TATTAAAGAT ACTCCAACTC
GTTTCAACCC AATTAATACA AAACAAACTA AAATTACCTT ATATCCATCA
GAAATTAAAG CAATTGAAAT TACTTATCAT TAAAATTATG TATCAAATAA
AATAAATA
Translated Amino Acid Sequence SLD172
<All Frames>
QEDFLNEIEIDCSPRSDFKSDQSDDHKEFIQIDFPAKLKPFSSKLYYLKRKSNPNKSNWV
LPKTNHFNSIENSIYTANLDE---
---INARFECYLDEVPSNSQQSNGGGGGDDIRKQSINYQHKFQIYQGQDSSYMSSKSFML
KPLPEFIHILSMERSGPRSIKLRIHNIENNNQSPITFDLNGLFSFIKSIKSIKEYNLSLI
NRFVDNNIDNIISSHRSIVGKNLFPIKDTPTRFNPINTKQTKITLYPSEIKAIEITYH*n
yvsnkin
Homology SLD172 vs CSM-cDNA
<more CSM info>
Sequences producing significant alignments: (bits) Value
SSM227 (SSM227Q) /CSM/SS/SSM2-B/SSM227Q.Seq.d/ 946 0.0
SLD172 (SLD172Q) /CSM/SL/SLD1-C/SLD172Q.Seq.d/ 946 0.0
CHM473 (CHM473Q) /CSM/CH/CHM4-D/CHM473Q.Seq.d/ 946 0.0
SSK125 (SSK125Q) /CSM/SS/SSK1-B/SSK125Q.Seq.d/ 938 0.0
SHF725 (SHF725Q) /CSM/SH/SHF7-B/SHF725Q.Seq.d/ 924 0.0
SHD557 (SHD557Q) /CSM/SH/SHD5-C/SHD557Q.Seq.d/ 924 0.0
SHC488 (SHC488Q) /CSM/SH/SHC4-D/SHC488Q.Seq.d/ 924 0.0
SHC738 (SHC738Q) /CSM/SH/SHC7-B/SHC738Q.Seq.d/ 920 0.0
CHF377 (CHF377Q) /CSM/CH/CHF3-D/CHF377Q.Seq.d/ 920 0.0
AHK370 (AHK370Q) /CSM/AH/AHK3-C/AHK370Q.Seq.d/ 920 0.0
Homology SLD172 vs DNA
<more DNA info>
Sequences producing significant alignments: (bits) Value N
(BJ383060) Dictyostelium discoideum cDNA clone:ddc46b20, 3' ... 946 0.0 2
(AU038976) Dictyostelium discoideum slug cDNA, clone SSM227. 946 0.0 2
(AU052344) Dictyostelium discoideum slug cDNA, clone SLD172. 946 0.0 2
(C91361) Dictyostelium discoideum slug cDNA, clone SSK125. 938 0.0 2
(BJ405376) Dictyostelium discoideum cDNA clone:dds31a15, 3' ... 924 0.0 2
(BJ404576) Dictyostelium discoideum cDNA clone:dds28p22, 3' ... 858 0.0 3
(BJ406434) Dictyostelium discoideum cDNA clone:dds35b07, 3' ... 858 0.0 3
(BJ353856) Dictyostelium discoideum cDNA clone:dda51l17, 3' ... 858 0.0 3
(BJ404713) Dictyostelium discoideum cDNA clone:dds29l09, 3' ... 858 0.0 3
(BJ378798) Dictyostelium discoideum cDNA clone:ddc32j19, 3' ... 858 0.0 3
Homology SLD172 vs Protein
<more Protein info>
Sequences producing significant alignments: (bits) Value
JI166157_1(JI166157|pid:none) TSA: Ascaris suum ASCF_1652_3074 m... 40 0.14
CR380955_105(CR380955|pid:none) Candida glabrata strain CBS138 c... 36 2.7
FN538970_2985(FN538970|pid:none) Clostridium difficile CD196 com... 35 4.5
(Q54HT7) RecName: Full=Arrestin domain-containing protein F; 35 4.5
CP002999_2169(CP002999|pid:none) Muricauda ruestringensis DSM 13... 35 4.5
(Q20681) RecName: Full=BTB and MATH domain-containing protein 38... 35 4.5
AL844506_148(AL844506|pid:none) Plasmodium falciparum 3D7 chromo... 35 5.9
(B2TIU0) RecName: Full=2-C-methyl-D-erythritol 2,4-cyclodiphosph... 35 5.9
AE015928_4278(AE015928|pid:none) Bacteroides thetaiotaomicron VP... 35 5.9
FM992688_1082(FM992688|pid:none) Candida dubliniensis CD36 chrom... 34 7.7
Homology SLD172 vs Genome
<more Genome info>
<List of Series> <Series: SLD1-C> <Clone: SLD172> <SEQ> <Translated> <CSM> <DNA> <Protein> <Genome> <PSORT> <MOTIF>
Dictyostelium discoideum cDNA Project Home