Dictyostelium discoideum cDNA Clone SLC550

Size:		997
3' sequence:	TM980507
5' sequence:	TM981208
Whole insert?:	Y
Accession #:	
Remarks:	*

Sequence SLC550

AGTGGGTGGC TCATATGGTG GTATGCTAAC TGCATGGTTT AGAATGAAAT
ATCCAAACAT TGTCGATGGT GCATTGGCAG CAAGTGCACC AATTCTTAGT
TTTTTAAATA CTGGTGTAAA TCCAGAGACA TTCAATAAGA TTGCCACTGA
TGATTTTAAA GACACAAGCT CTGAAGGCAC ATGTGCATCT CGTATCAGAT
CGGCTTTGAA TGATATCGTC ACCATTTCAA CACAATCCAA TGGTTTAGCA
CAATTGAGTA AAACTTTCTC AGTTTGTGGT GCACCATTGA CCGATGTTAA
TGATTTAATC AATTGGATTG AGTCTGCTTT AACTTATATG GCCATGGCAG
ACTACCCATA TCCAGCAAAC TTTTTAGAAC CAATGCCAGG TTACCCAATC
AATGTATCTT GTAGTGCTTT GGCTCAACAA GAAGACGATA TTCAAGGACT
CTTGGAGGTG TTACATGTTT ACTATAACTA CACTGGTCAA GCTGGTACTT
GCTATAACAT GTCTGTATTT ACCACTGGTG CATTGGGTGA TGCAAGTTGG
AATTATCAAG CATGTACTGA AATGGTTATG CCTGTAAGTT CAGATGGTGT
AAATGATTTC TTCCCACCTT CACCATTCTC TTTATCTGAT TTAACTCAAC
AATGCCAACA ACAATTTCAA ACTACCCCAG ATCCATATTG GATTACTACC
TATTATGGTG GTAGTAATTT CTCTGCCACT AATATCATCT TTTCAAATGG
TGTACTCGAT GTTTGGAGAT CTGGTGGTAT TTTAGAAACT CGTTCAGATT
CAATCGTTGC TCTTACCATT GAAGGTGGTG CTCATCATTT AGATCTTAGA
TATCCAAATC CATTAGATCC ACCTTCTGTC ACTCAAGCTC GTGAAATTGA
ATCAAAATTA TTACAACTTT GGGCAAGTGA AGCCTCTTTA TTAAAACAAA
GAAAATAAAT TTTAATTTAA TTAATTATTT AATGTTCAAA CAAAAAA

Translated Amino Acid Sequence SLC550

VGGSYGGMLTAWFRMKYPNIVDGALAASAPILSFLNTGVNPETFNKIATDDFKDTSSEGT
CASRIRSALNDIVTISTQSNGLAQLSKTFSVCGAPLTDVNDLINWIESALTYMAMADYPY
PANFLEPMPGYPINVSCSALAQQEDDIQGLLEVLHVYYNYTGQAGTCYNMSVFTTGALGD
ASWNYQACTEMVMPVSSDGVNDFFPPSPFSLSDLTQQCQQQFQTTPDPYWITTYYGGSNF
SATNIIFSNGVLDVWRSGGILETRSDSIVALTIEGGAHHLDLRYPNPLDPPSVTQAREIE
SKLLQLWASEASLLKQRK*ili*lii*csnkk

Homology SLC550 vs CSM-cDNA

Sequences producing significant alignments:                      (bits) Value


SLC550 (SLC550Q) /CSM/SL/SLC5-C/SLC550Q.Seq.d/                       1976   0.0
SFF733 (SFF733Q) /CSM/SF/SFF7-B/SFF733Q.Seq.d/                       1362   0.0
AFB585 (AFB585Q) /CSM/AF/AFB5-D/AFB585Q.Seq.d/                       1235   0.0
VFD375 (VFD375Q) /CSM/VF/VFD3-D/VFD375Q.Seq.d/                       1219   0.0
VFD649 (VFD649Q) /CSM/VF/VFD6-C/VFD649Q.Seq.d/                       1215   0.0
VFG579 (VFG579Q) /CSM/VF/VFG5-D/VFG579Q.Seq.d/                       1033   0.0
VFG763 (VFG763Q) /CSM/VF/VFG7-C/VFG763Q.Seq.d/                       1031   0.0
VFE567 (VFE567Q) /CSM/VF/VFE5-C/VFE567Q.Seq.d/                       1027   0.0
VFE674 (VFE674Q) /CSM/VF/VFE6-D/VFE674Q.Seq.d/                        950   0.0
VFE651 (VFE651Q) /CSM/VF/VFE6-C/VFE651Q.Seq.d/                        928   0.0

Homology SLC550 vs DNA

Sequences producing significant alignments:                  (bits) Value  N


(BJ398384) Dictyostelium discoideum cDNA clone:dds12b09, 3' ...  1310   0.0    1
(AU060994) Dictyostelium discoideum slug cDNA, clone SLC550.     1296   0.0    1
(BJ341022) Dictyostelium discoideum cDNA clone:dda4i21, 3' e...  1223   0.0    1
(BJ430584) Dictyostelium discoideum cDNA clone:ddv7f19, 3' e...  1168   0.0    1
(BJ430726) Dictyostelium discoideum cDNA clone:ddv8a14, 3' e...  1164   0.0    1
(BJ431581) Dictyostelium discoideum cDNA clone:ddv14n15, 3' ...  1031   0.0    1
(BJ428039) Dictyostelium discoideum cDNA clone:ddv10e17, 3' ...  1017   0.0    2
(BJ431632) Dictyostelium discoideum cDNA clone:ddv14m19, 3' ...   993   0.0    2
(AU034304) Dictyostelium discoideum slug cDNA, clone SLC550.      999   0.0    1
(BJ428101) Dictyostelium discoideum cDNA clone:ddv10c20, 3' ...   888   0.0    1

Homology SLC550 vs Protein

Sequences producing significant alignments:                      (bits) Value


(Q2TA14) RecName: Full=Lysosomal Pro-X carboxypeptidase;        ...   266   1e-69
(Q5RBU7) RecName: Full=Lysosomal Pro-X carboxypeptidase;        ...   266   2e-69
AK312919_1(AK312919|pid:none) Homo sapiens cDNA, FLJ93368, highl...   263   8e-69
AK091786_1(AK091786|pid:none) Homo sapiens cDNA FLJ34467 fis, cl...   259   1e-67
AK228101_1(AK228101|pid:none) Arabidopsis thaliana mRNA for lyso...   259   2e-67
BC026424_1(BC026424|pid:none) Mus musculus prolylcarboxypeptidas...   253   8e-66
(Q7TMR0) RecName: Full=Lysosomal Pro-X carboxypeptidase;        ...   253   8e-66
AB010075_11(AB010075|pid:none) Arabidopsis thaliana genomic DNA,...   248   3e-64
EF677907_1(EF677907|pid:none) Picea sitchensis clone WS0278_A06 ...   238   4e-61
EF710650_10(EF710650|pid:none) Glyptapanteles flavicoxis clone B...   233   1e-59

Homology SLC550 vs Genome