Homology SLC550 vs DNA
Query= SLC550 (SLC550Q) /CSM/SL/SLC5-C/SLC550Q.Seq.d/
(997 letters)
Database: ddbj_B
98,226,423 sequences; 98,766,808,389 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value N
(BJ398384) Dictyostelium discoideum cDNA clone:dds12b09, 3' ... 1310 0.0 1
(AU060994) Dictyostelium discoideum slug cDNA, clone SLC550. 1296 0.0 1
(BJ341022) Dictyostelium discoideum cDNA clone:dda4i21, 3' e... 1223 0.0 1
(BJ430584) Dictyostelium discoideum cDNA clone:ddv7f19, 3' e... 1168 0.0 1
(BJ430726) Dictyostelium discoideum cDNA clone:ddv8a14, 3' e... 1164 0.0 1
(BJ431581) Dictyostelium discoideum cDNA clone:ddv14n15, 3' ... 1031 0.0 1
(BJ428039) Dictyostelium discoideum cDNA clone:ddv10e17, 3' ... 1017 0.0 2
(BJ431632) Dictyostelium discoideum cDNA clone:ddv14m19, 3' ... 993 0.0 2
(AU034304) Dictyostelium discoideum slug cDNA, clone SLC550. 999 0.0 1
(BJ428101) Dictyostelium discoideum cDNA clone:ddv10c20, 3' ... 888 0.0 1
(BJ428037) Dictyostelium discoideum cDNA clone:ddv10e14, 3' ... 884 0.0 1
(BJ341372) Dictyostelium discoideum cDNA clone:dda6k08, 3' e... 117 8e-22 1
(FE235939) CAPG3626.rev CAPG Naegleria gruberi amoeba stage ... 44 2e-06 3
(FE242090) CAPG700.rev CAPG Naegleria gruberi amoeba stage N... 44 2e-06 3
(FE254657) CAPH5164.rev CAPH Naegleria gruberi amoeba stage ... 44 2e-06 3
(FE237997) CAPG4641.rev CAPG Naegleria gruberi amoeba stage ... 44 2e-06 3
(FE237421) CAPG4368.rev CAPG Naegleria gruberi amoeba stage ... 44 2e-06 3
(EY108231) CAZI5655.rev CAZI Artemisia annua normalized leaf... 54 1e-05 2
(EY114808) CAZI9048.rev CAZI Artemisia annua normalized leaf... 54 1e-05 2
(EE647475) CHEM7541.b1_I14.ab1 CHE(LMS) serpentine sunflower... 46 3e-04 4
(FE235020) CAPG3133.rev CAPG Naegleria gruberi amoeba stage ... 36 4e-04 3
(EY081943) CAZI15085.rev CAZI Artemisia annua normalized lea... 46 0.002 2
(AU271317) Dictyostelium discoideum gamete cDNA clone:FC-IC0... 56 0.003 1
(FE231086) CAPG10192.rev CAPG Naegleria gruberi amoeba stage... 44 0.004 2
(EY112518) CAZI7889.rev CAZI Artemisia annua normalized leaf... 54 0.010 1
(EH631779) EST2886 LK04 Laupala kohalensis cDNA clone 106102... 48 0.044 2
(CO112355) GR__Eb0048P13.r GR__Eb Gossypium raimondii cDNA c... 38 0.081 3
(BJ416688) Dictyostelium discoideum cDNA clone:ddv26p04, 5' ... 50 0.16 1
(CV713843) UCRCS08_0003G13_r Parent Washington Navel Orange ... 44 1.4 2
(GE540595) CCHS27025.b1_B13.ab1 CCHS Espina Barnadesia spino... 36 1.7 2
(CR376829) Zebrafish DNA sequence from clone CH211-218I18 in... 44 2.2 3
(ED761064) GM_WBb0131M17.f GM_WBb Glycine max genomic clone ... 46 2.5 1
(ED698792) GM_WBb0039G08.f GM_WBb Glycine max genomic clone ... 46 2.5 1
(ED673681) GM_WBb0003F12.f GM_WBb Glycine max genomic clone ... 46 2.5 1
(CZ516398) GMW2-39G8a.b2 GMW2 Glycine max genomic, genomic s... 46 2.5 1
(CJ464178) Macaca fascicularis mRNA, clone: QnpA-12819, 5' e... 46 2.5 1
(BW577665) Ciona savignyi cDNA, clone:csef040i23, 5'end, sin... 46 2.5 1
(GE302424) OXAY-aaa34h04.g1 Oxytricha_pSMART_OXAY Sterkiella... 46 2.5 1
(FK193572) XABT206914.b1 Gateway compatible cien cDNA librar... 46 2.5 1
(FK151517) XABT180800.b1 Gateway compatible cien cDNA librar... 46 2.5 1
(FK142601) XABT175473.b1 Gateway compatible cien cDNA librar... 46 2.5 1
(FK123099) XABT163694.b1 Gateway compatible cien cDNA librar... 46 2.5 1
(FK098195) XABT147308.b1 Gateway compatible cien cDNA librar... 46 2.5 1
(FK095319) XABT145569.b1 Gateway compatible cien cDNA librar... 46 2.5 1
(FK062611) XABT125429.b1 Gateway compatible cien cDNA librar... 46 2.5 1
(FK044821) XABT114325.b1 Gateway compatible cien cDNA librar... 46 2.5 1
(FF804178) XABT95485.fwd Gateway compatible cien cDNA librar... 46 2.5 1
(FF723384) XABT39686.fwd Gateway compatible cien cDNA librar... 46 2.5 1
(FF720040) XABT37497.fwd Gateway compatible cien cDNA librar... 46 2.5 1
(FF704680) XABT112614.fwd Gateway compatible cien cDNA libra... 46 2.5 1
(FF688989) XABT102305.fwd Gateway compatible cien cDNA libra... 46 2.5 1
(FF688475) XABT101944.fwd Gateway compatible cien cDNA libra... 46 2.5 1
(DB625925) Halocynthia roretzi cDNA clone:man4m21, 5' end. 34 6.5 2
(FH972950) CHO_OF6814xi20f1.ab1 CHO_OF6 Nicotiana tabacum ge... 40 7.4 2
(EL722305) CBSS4633.fwd NICHD_XGC_tropSp1 Xenopus (Silurana)... 34 7.6 2
(AX109495) Sequence 228 from Patent WO0123604. 44 9.9 1
(AX109493) Sequence 226 from Patent WO0123604. 44 9.9 1
(AX109491) Sequence 224 from Patent WO0123604. 44 9.9 1
(AX109489) Sequence 222 from Patent WO0123604. 44 9.9 1
(AX109486) Sequence 219 from Patent WO0123604. 44 9.9 1
(AX109481) Sequence 214 from Patent WO0123604. 44 9.9 1
(AC105383) Homo sapiens BAC clone RP11-9G1 from 4, complete ... 44 9.9 1
(AC087358) Homo sapiens chromosome 8, clone RP11-442A17, com... 44 9.9 1
(AC027704) Homo sapiens chromosome 1 clone RP11-459O20 map 1... 44 9.9 1
(CT737406) Pig DNA sequence *** SEQUENCING IN PROGRESS *** f... 44 9.9 1
(AC222012) Bos taurus clone CH240-374K17, WORKING DRAFT SEQU... 44 9.9 1
(AC219028) Zea mays chromosome 9 clone CH201-537C10; ZMMBBc0... 44 9.9 1
(AC211329) Zea mays chromosome 9 clone CH201-76A23; ZMMBBc00... 44 9.9 1
(AC182086) Bos taurus clone CH240-399F18, WORKING DRAFT SEQU... 44 9.9 1
(AC022525) Homo sapiens chromosome 8 clone RP11-442A17, WORK... 44 9.9 1
(ER319026) 1092344163646 Global-Ocean-Sampling_GS-34-01-01-1... 44 9.9 1
(EJ351805) 1092963594043 Global-Ocean-Sampling_GS-28-01-01-1... 44 9.9 1
(ED659820) GM_WBa0081L01.r GM_WBa Glycine max genomic clone ... 44 9.9 1
(CT380935) Sus scrofa genomic clone CH242-69L8, genomic surv... 44 9.9 1
(CC436779) PUDJX03TD ZM_0.6_1.0_KB Zea mays genomic clone ZM... 44 9.9 1
(EE262372) C07_C07fm2j13_pDNRf_521149 Myzus persicae, line F... 44 9.9 1
(DT583889) ltu01-34ms1-m08 Ltu01 Liriodendron tulipifera cDN... 44 9.9 1
(DT541020) DR010023A10D05 Canine normalized retinal cDNA lib... 44 9.9 1
(DT539414) DR010015B10D07 Canine normalized retinal cDNA lib... 44 9.9 1
(DT537696) DR010007B10C02 Canine normalized retinal cDNA lib... 44 9.9 1
(AM863985) Crassostrea gigas EST, 5' end sequence, clone cdn... 44 9.9 1
(BJ359625) Dictyostelium discoideum cDNA clone:ddc15m15, 5' ... 44 9.9 1
(GE316210) OXBA-aaa40g09.b1 Oxytricha_pSMART_OXBA Sterkiella... 44 9.9 1
(GE304527) OXAY-aaa71b08.g1 Oxytricha_pSMART_OXAY Sterkiella... 44 9.9 1
(GD166766) OXBB-aaa04d03.g1 Oxytricha_pSMART_OXBB Sterkiella... 44 9.9 1
(GD165391) OXAY-aaa15c12.b1 Oxytricha_pSMART_OXAY Sterkiella... 44 9.9 1
(AW199690) da05b08.y1 Xenopus laevis oocyte Xenopus laevis c... 44 9.9 1
(U75481) Streptococcus mutans putative elongation factor-Tu ... 44 9.9 1
(EF536028) Streptococcus mutans ATCC 25175 elongation factor... 44 9.9 1
(DQ832184) Enterococcus faecium strain L50 plasmid pCIZ2, co... 44 9.9 1
(AF276275) Streptococcus sobrinus elongation factor Tu (tuf)... 44 9.9 1
(AF276272) Streptococcus ratti elongation factor Tu (tuf) ge... 44 9.9 1
(AF276268) Streptococcus macacae elongation factor Tu (tuf) ... 44 9.9 1
(AF276265) Streptococcus ferus elongation factor Tu (tuf) ge... 44 9.9 1
(AF276260) Streptococcus criceti elongation factor Tu (tuf) ... 44 9.9 1
(AF274741) Streptococcus mutans elongation factor Tu (tuf) g... 44 9.9 1
(AE014133) Streptococcus mutans UA159, complete genome. 44 9.9 1
>(BJ398384) Dictyostelium discoideum cDNA clone:dds12b09, 3' end,
single read.
Length = 689
Score = 1310 bits (661), Expect = 0.0
Identities = 661/661 (100%)
Strand = Plus / Minus
Query: 276 gtggtgcaccattgaccgatgttaatgatttaatcaattggattgagtctgctttaactt 335
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 689 gtggtgcaccattgaccgatgttaatgatttaatcaattggattgagtctgctttaactt 630
Query: 336 atatggccatggcagactacccatatccagcaaactttttagaaccaatgccaggttacc 395
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 629 atatggccatggcagactacccatatccagcaaactttttagaaccaatgccaggttacc 570
Query: 396 caatcaatgtatcttgtagtgctttggctcaacaagaagacgatattcaaggactcttgg 455
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 569 caatcaatgtatcttgtagtgctttggctcaacaagaagacgatattcaaggactcttgg 510
Query: 456 aggtgttacatgtttactataactacactggtcaagctggtacttgctataacatgtctg 515
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 509 aggtgttacatgtttactataactacactggtcaagctggtacttgctataacatgtctg 450
Query: 516 tatttaccactggtgcattgggtgatgcaagttggaattatcaagcatgtactgaaatgg 575
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 449 tatttaccactggtgcattgggtgatgcaagttggaattatcaagcatgtactgaaatgg 390
Query: 576 ttatgcctgtaagttcagatggtgtaaatgatttcttcccaccttcaccattctctttat 635
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 389 ttatgcctgtaagttcagatggtgtaaatgatttcttcccaccttcaccattctctttat 330
Query: 636 ctgatttaactcaacaatgccaacaacaatttcaaactaccccagatccatattggatta 695
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 329 ctgatttaactcaacaatgccaacaacaatttcaaactaccccagatccatattggatta 270
Query: 696 ctacctattatggtggtagtaatttctctgccactaatatcatcttttcaaatggtgtac 755
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 269 ctacctattatggtggtagtaatttctctgccactaatatcatcttttcaaatggtgtac 210
Query: 756 tcgatgtttggagatctggtggtattttagaaactcgttcagattcaatcgttgctctta 815
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 209 tcgatgtttggagatctggtggtattttagaaactcgttcagattcaatcgttgctctta 150
Query: 816 ccattgaaggtggtgctcatcatttagatcttagatatccaaatccattagatccacctt 875
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 149 ccattgaaggtggtgctcatcatttagatcttagatatccaaatccattagatccacctt 90
Query: 876 ctgtcactcaagctcgtgaaattgaatcaaaattattacaactttgggcaagtgaagcct 935
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 89 ctgtcactcaagctcgtgaaattgaatcaaaattattacaactttgggcaagtgaagcct 30
Query: 936 c 936
|
Sbjct: 29 c 29
Lambda K H
1.37 0.711 1.31
Matrix: blastn matrix:1 -3
Number of Sequences: 98226423
Number of Hits to DB: 995,488,820
Number of extensions: 53896726
Number of successful extensions: 4097388
Number of sequences better than 10.0: 98
Length of query: 997
Length of database: 98,766,808,389
Length adjustment: 24
Effective length of query: 973
Effective length of database: 96,409,374,237
Effective search space: 93806321132601
Effective search space used: 93806321132601
X1: 11 (21.8 bits)
S2: 22 (44.1 bits)
Dictyostelium discoideum cDNA Project Home