Dictyostelium discoideum cDNA Clone SLC529

Size:		1259
3' sequence:	TM980507
5' sequence:	TM981208
Whole insert?:	Y
Accession #:	
Remarks:	*

Sequence SLC529

CCAAATTTTA ATTATTAATA TTTTTTTTTT TTAAATAAAA ATATATAAAT
ATATAANNNT NNNATAAAGT TTATTTATGG ACTTTTAGCT CTTGCAGCTT
CAATTGTAGC AACGAATGCT CAATATTGTT CTATTGGTGT TTGTCTAAAA
GAAGGTGAAA ATTGTAACAT ANCTAANNNT AATTTTACAG ATAATAGTGT
AGTTGATATT ACATGTGAAT ATGGTACTTT TTGTCCATCT AGTTCAGTAA
TCTTTACCCC AGTTTGTACT AAATTAAGTG GTTTAGGAGA AACTTGTGGC
ACCCCATTCA CAGAATGTGC AGAACCATTC GCATGTCGTT CTGTTACAAC
CACCAAAGGT AATTTACAAA CTTGTGCTAT GCCAGATTAT TTAGGTTTTG
GTGAAAGTTG TAATTCAGAC TACCAATGTG GTAATGGTTT AACATGTAAT
GNNGAGATTT GCTCATTGAA ACCACACGTT ATTTGTTCTA ACGATGGTCA
ATGTCCATTT GGTCAATTCT GTAATGGTAC TAACTCATTA AATACTCCAG
TCCAATGTAG AACACTTTAT GCTACCGGTG CAAAATGTAC TAGAGACGGT
CAATGCCCAT ACAACAACTA TTGTGGTGCC AAACAAGGTG ATAACTCTGG
TGATTTATTC TGTCAATCAA ATTTCAACAA AGTCCAAGGT GACACTTGTT
CAGTCCACGG TTCTTCATTT GTTCAATTAG GTTCTGGTTT CCGTTACGAA
TGTGCTGCTA CTTTAGTTTG CCAAGCTGGT ACCTGTCAAT CTCCACAAAA
CTCAATCCCA ACTGGTGATT GTATGGATAT CGCCAACTCT TGTCCATCAG
CATATGGTTC AAGTTGCCAA TGTACTTCTA CCTCACAAAT TATAACTGGT
AAATGCACTG CTAGTCCATT CAACTTGGCT TCAAATTGTC AAACCTCTGT
CCAAAACTTG GCCACATGTG CTATTGAACA TGAATGTCCA AGCATTGAAA
ATATCGAATT AGGTCCAGAT TCATGTCTCA TGAAACACTG TAGATCTGAA
ATCTGTGATA ACAATAATTG TATTGTTCAA ACAAACACTT GTGGTGATGC
ACCAGTTTAC CCAGTTTGTA ACACCCCATC ATCTTCATCT GTTATTTTGC
CATCATTTGT CTTATTAATT GTTGCCATTA TTGCTTTATT ATTCTAAAAA
TTTTATTAAA AACAAAATAA AATTATTTAA AAAATCGAAT TTTTTTTTTT
AAAAAAAAA

Translated Amino Acid Sequence SLC529

pnfny*yffflnkni*IYXXXIKFIYGLLALAASIVATNAQYCSIGVCLKEGENCNIXXX
NFTDNSVVDITCEYGTFCPSSSVIFTPVCTKLSGLGETCGTPFTECAEPFACRSVTTTKG
NLQTCAMPDYLGFGESCNSDYQCGNGLTCNXEICSLKPHVICSNDGQCPFGQFCNGTNSL
NTPVQCRTLYATGAKCTRDGQCPYNNYCGAKQGDNSGDLFCQSNFNKVQGDTCSVHGSSF
VQLGSGFRYECAATLVCQAGTCQSPQNSIPTGDCMDIANSCPSAYGSSCQCTSTSQIITG
KCTASPFNLASNCQTSVQNLATCAIEHECPSIENIELGPDSCLMKHCRSEICDNNNCIVQ
TNTCGDAPVYPVCNTPSSSSVILPSFVLLIVAIIALLF*kfy*kqnkii*kieffflkk

Homology SLC529 vs CSM-cDNA

Sequences producing significant alignments:                      (bits) Value


SLC529 (SLC529Q) /CSM/SL/SLC5-B/SLC529Q.Seq.d/                       2206   0.0
FC-BI21 (FC-BI21Q) /CSM/FC/FC-BI/FC-BI21Q.Seq.d/                     1865   0.0
VFI776 (VFI776Q) /CSM/VF/VFI7-D/VFI776Q.Seq.d/                       1235   0.0
SFC278 (SFC278Q) /CSM/SF/SFC2-D/SFC278Q.Seq.d/                       1124   0.0
SFE226 (SFE226Q) /CSM/SF/SFE2-B/SFE226Q.Seq.d/                       1094   0.0
VFM235 (VFM235Q) /CSM/VF/VFM2-B/VFM235Q.Seq.d/                       1049   0.0
VFI528 (VFI528Q) /CSM/VF/VFI5-B/VFI528Q.Seq.d/                       1039   0.0
SLB206 (SLB206Q) /CSM/SL/SLB2-A/SLB206Q.Seq.d/                        684   0.0
FC-IC1493 (FC-IC1493Q) /CSM/FC-IC/FC-IC1493Q.Seq.d/                   636   0.0
FC-IC1419 (FC-IC1419Q) /CSM/FC-IC/FC-IC1419Q.Seq.d/                   636   0.0

Homology SLC529 vs DNA

Sequences producing significant alignments:                  (bits) Value  N


(AB079253) Dictyostelium discoideum Dd-gdcA mRNA, complete cds.  2111   0.0    1
(AB079606) Dictyostelium discoideum Dd-gdcA gene, complete cds.  1935   0.0    1
(AU060988) Dictyostelium discoideum slug cDNA, clone SLC529.     1308   0.0    1
(AU284729) Dictyostelium discoideum gamete cDNA clone:FC-BI2...  1233   0.0    4
(BJ432488) Dictyostelium discoideum cDNA clone:ddv18h19, 3' ...  1170   0.0    1
(BJ399415) Dictyostelium discoideum cDNA clone:dds5k20, 3' e...  1070   0.0    1
(BJ416202) Dictyostelium discoideum cDNA clone:ddv25e10, 5' ...  1049   0.0    1
(BJ400213) Dictyostelium discoideum cDNA clone:dds9c08, 3' e...  1035   0.0    1
(BJ432311) Dictyostelium discoideum cDNA clone:ddv18g07, 3' ...   973   0.0    1
(AU034291) Dictyostelium discoideum slug cDNA, clone SLC529.      874   0.0    1

Homology SLC529 vs Protein

Sequences producing significant alignments:                      (bits) Value


AB079253_1(AB079253|pid:none) Dictyostelium discoideum Dd-gdcA m...   772   0.0
(Q52085) RecName: Full=Cell-cell adhesion glycoprotein 64;      ...    80   2e-13
(P41951) RecName: Full=Prion-like-(Q/N-rich) domain-bearing prot...    66   4e-09
AC115607_13(AC115607|pid:none) Dictyostelium discoideum chromoso...    65   1e-08
AC116977_110(AC116977|pid:none) Dictyostelium discoideum chromos...    63   3e-08
CP002271_962(CP002271|pid:none) Stigmatella aurantiaca DW4/3-1, ...    63   3e-08
JI166277_1(JI166277|pid:none) TSA: Ascaris suum ASCF_1730_3011 m...    61   2e-07
FN650140_1114(FN650140|pid:none) Legionella longbeachae NSW150, ...    60   3e-07
(Q7KWT9) RecName: Full=Uncharacterized protein DDB_G0272512; Fla...    58   1e-06
JI166028_1(JI166028|pid:none) TSA: Ascaris suum ASCF_1564_3152 m...    57   2e-06

Homology SLC529 vs Genome