Dictyostelium discoideum cDNA Clone SLB856

Size:		0.8k
3' sequence:	TM980420
5' sequence:	*
Whole insert?:	*
Accession #:	
Remarks:	*

Sequence SLB856

---------- AAAATGGGTC CAAAAGCACC AACCACTCCA ACTAAAAAAG
CAGCAGCCAC CAAATCAAAA CCAAAACCAA ATCATCCAAC TTATCAAGTT
ATGATTAGTA CAGCAATTGC ACATTATAAG GATAGAACTG GTTCATCTCA
ACCAGCCATT ATTAAATACA TTGAAGCCAA TTACAATGTT GCACCAGATA
CTTTCAAAAC TCAATTAAAA CTTGCACTCA AACGTTTAGT TGCCAAAGGT
ACTCTTACAA TGGTCAAAGC CAGTTACAAA TTATCAGAAG AAGGTAAAAA
GGAACACCAA GCCACTCTTG GTCCAGTTGC AAAGAAACCA AAAGCCAAGA
CTACCGCTAC TTCAACTGAA ACAACTGCCG CTCCACCAGC TACTCCAACC
AAAAAAGCTG CACCAAAGAA ACCAGCTGCT AAAGCTGCTT CAACCTCAAC
CAAAACTGCC GCTGCTAAAA AGAACTCTGC TAAAGTAACC AAAGCAGTTA
GTAAGAAGCC AGCTGCTAAA AAAGCTCCAA GT

Translated Amino Acid Sequence SLB856

---MGPKAPTTPTKKAAATKSKPKPNHPTYQVMISTAIAHYKDRTGSSQPAIIKYIEANY
NVAPDTFKTQLKLALKRLVAKGTLTMVKASYKLSEEGKKEHQATLGPVAKKPKAKTTATS
TETTAAPPATPTKKAAPKKPAAKAASTSTKTAAAKKNSAKVTKAVSKKPAAKKAPS

Homology SLB856 vs CSM-cDNA

Sequences producing significant alignments:                      (bits) Value


SLB856 (SLB856Q) /CSM/SL/SLB8-C/SLB856Q.Seq.d/                       1035   0.0
SLK644 (SLK644Q) /CSM/SL/SLK6-B/SLK644Q.Seq.d/                       1029   0.0
SLG855 (SLG855Q) /CSM/SL/SLG8-C/SLG855Q.Seq.d/                       1029   0.0
SSJ583 (SSJ583Q) /CSM/SS/SSJ5-D/SSJ583Q.Seq.d/                       1019   0.0
VSH740 (VSH740Q) /CSM/VS/VSH7-B/VSH740Q.Seq.d/                       1015   0.0
SSC264 (SSC264Q) /CSM/SS/SSC2-C/SSC264Q.Seq.d/                        999   0.0
SSF687 (SSF687Q) /CSM/SS/SSF6-D/SSF687Q.Seq.d/                        963   0.0
SSF316 (SSF316Q) /CSM/SS/SSF3-A/SSF316Q.Seq.d/                        809   0.0
SSM145 (SSM145Q) /CSM/SS/SSM1-B/SSM145Q.Seq.d/                        805   0.0
SSM820 (SSM820Q) /CSM/SS/SSM8-A/SSM820Q.Seq.d/                        793   0.0

Homology SLB856 vs DNA

Sequences producing significant alignments:                  (bits) Value  N


(U50904) Dictyostelium discoideum histone H1 mRNA, complete ...   876   0.0    1
(L33457) Dictyostelium discoideum (clone pBSK/HMG/ECO-XHO) h...   876   0.0    1
(AU034053) Dictyostelium discoideum slug cDNA, clone SLB856.      876   0.0    1
(C92652) Dictyostelium discoideum slug cDNA, clone SSF687.        876   0.0    1
(C91110) Dictyostelium discoideum slug cDNA, clone SSJ583.        876   0.0    1
(AU060617) Dictyostelium discoideum slug cDNA, clone SLK644.      870   0.0    1
(C91926) Dictyostelium discoideum slug cDNA, clone SSC264.        868   0.0    1
(AU267899) Dictyostelium discoideum vegetative cDNA clone:VS...   755   0.0    2
(C92613) Dictyostelium discoideum slug cDNA, clone SSF316.        809   0.0    1
(AU038922) Dictyostelium discoideum slug cDNA, clone SSM145.      805   0.0    1

Homology SLB856 vs Protein

Sequences producing significant alignments:                      (bits) Value


(P54671) RecName: Full=Histone H1;  &L33457_1(L33457|pid:none) &...   162   8e-39
CP001574_268(CP001574|pid:none) Micromonas sp. RCC299 chromosome...    74   3e-12
X62456_1(X62456|pid:none) A.thaliana H1-1C mRNA for histone H1-1...    72   1e-11
AK355735_1(AK355735|pid:none) Hordeum vulgare subsp. vulgare mRN...    71   2e-11
AF514417_1(AF514417|pid:none) Pisum sativum subsp. abyssinicum h...    69   9e-11
AF514416_1(AF514416|pid:none) Lathyrus aphaca histone H1 (His1) ...    69   9e-11
AF352246_1(AF352246|pid:none) Pisum sativum histone H1 (His1) ge...    69   9e-11
AJ635198_1(AJ635198|pid:none) Pisum sativum his5 gene for histon...    69   1e-10
AJ635199_1(AJ635199|pid:none) Pisum sativum his5 gene for histon...    69   1e-10
AF352249_1(AF352249|pid:none) Lathyrus sativus histone H1 (His1)...    69   1e-10

Homology SLB856 vs Genome