Homology SLB856 vs DNA
Query= SLB856 (SLB856Q) /CSM/SL/SLB8-C/SLB856Q.Seq.d/
(532 letters)
Database: ddbj_B
98,226,423 sequences; 98,766,808,389 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value N
(U50904) Dictyostelium discoideum histone H1 mRNA, complete ... 876 0.0 1
(L33457) Dictyostelium discoideum (clone pBSK/HMG/ECO-XHO) h... 876 0.0 1
(AU034053) Dictyostelium discoideum slug cDNA, clone SLB856. 876 0.0 1
(C92652) Dictyostelium discoideum slug cDNA, clone SSF687. 876 0.0 1
(C91110) Dictyostelium discoideum slug cDNA, clone SSJ583. 876 0.0 1
(AU060617) Dictyostelium discoideum slug cDNA, clone SLK644. 870 0.0 1
(C91926) Dictyostelium discoideum slug cDNA, clone SSC264. 868 0.0 1
(AU267899) Dictyostelium discoideum vegetative cDNA clone:VS... 755 0.0 2
(C92613) Dictyostelium discoideum slug cDNA, clone SSF316. 809 0.0 1
(AU038922) Dictyostelium discoideum slug cDNA, clone SSM145. 805 0.0 1
(C93419) Dictyostelium discoideum slug cDNA, clone SSM820. 793 0.0 1
(AU061980) Dictyostelium discoideum slug cDNA, clone SLG855. 743 0.0 1
(AU033411) Dictyostelium discoideum slug cDNA, clone SLA738. 726 0.0 1
(AU034151) Dictyostelium discoideum slug cDNA, clone SLC106. 722 0.0 1
(C94445) Dictyostelium discoideum slug cDNA, clone SSK811. 700 0.0 1
(AU039965) Dictyostelium discoideum slug cDNA, clone SLG855. 640 e-179 1
(C92484) Dictyostelium discoideum slug cDNA, clone SSE804. 597 e-166 1
(AU275093) Dictyostelium discoideum gamete cDNA clone:FC-IC1... 559 e-155 1
(AU272225) Dictyostelium discoideum gamete cDNA clone:FC-IC1... 559 e-155 1
(AU272222) Dictyostelium discoideum gamete cDNA clone:FC-IC1... 559 e-155 1
(AU272033) Dictyostelium discoideum gamete cDNA clone:FC-IC0... 559 e-155 1
(AU275229) Dictyostelium discoideum gamete cDNA clone:FC-IC1... 543 e-150 1
(AU264749) Dictyostelium discoideum vegetative cDNA clone:VS... 517 e-142 1
(AU267898) Dictyostelium discoideum vegetative cDNA clone:VS... 507 e-139 1
(BJ335391) Dictyostelium discoideum cDNA clone:dda50d01, 5' ... 476 e-130 1
(AU034545) Dictyostelium discoideum slug cDNA, clone SLC449. 474 e-129 1
(C91253) Dictyostelium discoideum slug cDNA, clone SSJ503. 458 e-124 1
(AU268358) Dictyostelium discoideum vegetative cDNA clone:VS... 416 e-112 1
(AU262292) Dictyostelium discoideum vegetative cDNA clone:VS... 345 1e-90 1
(AU060380) Dictyostelium discoideum slug cDNA, clone SLJ541. 305 9e-79 1
(AU264750) Dictyostelium discoideum vegetative cDNA clone:VS... 297 2e-76 1
(AU060541) Dictyostelium discoideum slug cDNA, clone SLK340. 289 5e-74 1
(AU061174) Dictyostelium discoideum slug cDNA, clone SLD475. 264 3e-66 1
(AU052528) Dictyostelium discoideum slug cDNA, clone SLD475. 256 7e-64 1
(AU053152) Dictyostelium discoideum slug cDNA, clone SLF824. 230 4e-56 1
(AU053713) Dictyostelium discoideum slug cDNA, clone SLJ541. 188 1e-43 1
(BJ407581) Dictyostelium discoideum cDNA clone:dds43c02, 3' ... 184 2e-42 1
(AU262083) Dictyostelium discoideum vegetative cDNA clone:VS... 119 1e-22 1
(AU071316) Dictyostelium discoideum slug cDNA, clone SSB222. 86 2e-12 1
(AU267763) Dictyostelium discoideum vegetative cDNA clone:VS... 84 6e-12 1
(AU061880) Dictyostelium discoideum slug cDNA, clone SLG460. 74 6e-09 1
(EY036254) CAIY2614.fwd CAIY Artemisia annua leaf Artemisia ... 48 2e-04 2
(EY036253) CAIY2614.rev CAIY Artemisia annua leaf Artemisia ... 48 2e-04 2
(EY087364) CAZI17841.fwd CAZI Artemisia annua normalized lea... 48 0.010 2
(EY091763) CAZI20389.rev CAZI Artemisia annua normalized lea... 48 0.011 2
(EY091764) CAZI20389.fwd CAZI Artemisia annua normalized lea... 48 0.011 2
(EY032529) CAIU422.fwd CAIU Artemisia annua leaf Artemisia a... 48 0.011 2
(EY032528) CAIU422.rev CAIU Artemisia annua leaf Artemisia a... 48 0.011 2
(CX280819) 51ETGS4H_RP_003_H08_02SEP2004_050 Germinating see... 34 0.019 3
(DY029553) 47RDOAH_UP_043_A04_20AUG2004_032 O. Alba 47RDOAH ... 34 0.031 3
(AM060380) Brassica oleracea var. alboglabra EST, clone AAF... 34 0.031 3
(EE531918) 46RDOAG_UP_025_F10_30DEC2004_070 O. Alba 46RDOAG ... 34 0.032 3
(DY030212) 47RDOAH_UP_050_D10_20AUG2004_074 O. Alba 47RDOAH ... 34 0.033 3
(EE471048) BNSCS5CT_UP_008_B09_20JAN2005_077 Brassica napus ... 34 0.036 3
(ES943213) 48RDOAM_UP_053_H06_03FEB2006_034 Brassica olerace... 34 0.037 3
(EK302753) 1095462369786 Global-Ocean-Sampling_GS-31-01-01-1... 38 0.048 3
(ER527768) 1093015717677 Global-Ocean-Sampling_GS-35-01-01-1... 40 0.053 3
(AF002682) Chironomus thummi thummi histone H1-II-2 gene, pa... 34 0.079 3
(FE330474) CANZ578.fwd CANZ_Daphnia_pulex_Log50_Library_19 D... 50 0.084 1
(FE330473) CANZ578.rev CANZ_Daphnia_pulex_Log50_Library_19 D... 50 0.084 1
(FE300925) CANP1950.fwd CANP_Daphnia_pulex_Log50_Library_2 D... 50 0.084 1
(CO540485) tai11c11.y1 HyEch JUMY T1 Hydractinia echinata cD... 38 0.12 3
(DN135460) tam55e12.y2 Hydra_EST_HyEch_JUMY_T2 Hydractinia e... 38 0.12 3
(FF490799) G708P5195RD2.T0 Acorn worm normalized gastrula pE... 46 0.14 2
(FF520985) G710P5241RH1.T0 Acorn worm normalized juvenile pE... 46 0.14 2
(EV120508) 0125820 Brassica napus Root library Brassica napu... 34 0.20 3
(AU284924) Dictyostelium discoideum gamete cDNA clone:FC-BQ0... 48 0.33 1
(AU284917) Dictyostelium discoideum gamete cDNA clone:FC-BP2... 48 0.33 1
(AU284857) Dictyostelium discoideum gamete cDNA clone:FC-BN1... 48 0.33 1
(EY087363) CAZI17841.rev CAZI Artemisia annua normalized lea... 48 0.33 1
(FF605912) G825P5125RC3.T0 Acorn worm normalized gastrula pE... 44 0.48 2
(ER110191) 1095521938863 Global-Ocean-Sampling_GS-33-01-01-1... 46 1.3 1
(EK276805) 1095462280483 Global-Ocean-Sampling_GS-31-01-01-1... 46 1.3 1
(EJ619786) 1092963049676 Global-Ocean-Sampling_GS-29-01-01-1... 46 1.3 1
(EJ222134) 1092351244758 Global-Ocean-Sampling_GS-27-01-01-1... 46 1.3 1
(EJ165177) 1092344062964 Global-Ocean-Sampling_GS-27-01-01-1... 46 1.3 1
(EJ043895) 1095454108552 Global-Ocean-Sampling_GS-26-01-01-1... 46 1.3 1
(CX980963) JGI_CAAP12182.fwd NIH_XGC_tropInt1 Xenopus (Silur... 46 1.3 1
(BW572659) Ciona savignyi cDNA, clone:csef010k06, 5'end, sin... 46 1.3 1
(BW551046) Ciona savignyi cDNA, clone:csga060h09, 3'end, sin... 46 1.3 1
(BW520855) Ciona savignyi cDNA, clone:csga060h09, 5'end, sin... 46 1.3 1
(CO511124) tai56f01.y1 Hydra EST UCI 5 ALP Hydra magnipapill... 36 1.5 2
(CI181759) Oryza sativa Japonica Group cDNA, clone: 035-M002... 36 1.5 2
(EY039920) CAIY4943.fwd CAIY Artemisia annua leaf Artemisia ... 40 1.7 2
(CD825003) BN25.059G24F011129 BN25 Brassica napus cDNA clone... 38 1.9 2
(EE425470) 32ETGS24_UP_001_A04_09MAR2004_032 Brassica napus ... 38 2.1 2
(EV159804) 0083666 Brassica napus Bud library Brassica napus... 38 2.1 2
(EY039919) CAIY4943.rev CAIY Artemisia annua leaf Artemisia ... 40 2.1 2
(DY012411) 40JKME7D_UP_006_A01_26MAR2004_015 40JKME7D Brassi... 38 2.2 2
(EV121545) 0126857 Brassica napus Root library Brassica napu... 38 2.2 2
(EV202901) 0104054 Brassica napus Cold acclimation - light B... 38 2.2 2
(DY017817) 63JKCOT5_T3_007_E12_04JAN2005_088 63JKCOT5 Brassi... 38 2.2 2
(AE017245) Mycoplasma synoviae 53, complete genome. 32 2.3 2
(L29104) Glyptotendipes salinus histone H1-I gene, complete ... 36 2.5 2
(AF002683) Chironomus tentans histone H1d gene, complete cds. 32 2.7 3
(AU283019) Molgula tectiformis mRNA, clone:MT02A1F09R, 5' end. 34 4.4 2
(AU283006) Molgula tectiformis mRNA, clone:MT02A1D10R, 5' end. 34 4.6 2
(AU282991) Molgula tectiformis mRNA, clone:MT02A1B10R, 5' end. 34 4.7 2
(CO720726) tai49d07.y1 HyEch JUMY T1 Hydractinia echinata cD... 38 4.8 2
(CJ366457) Molgula tectiformis cDNA, gastrula/neurula clone:... 34 5.1 2
(ER262619) 1095527052391 Global-Ocean-Sampling_GS-33-01-01-1... 44 5.2 1
(ER239202) 1095526071910 Global-Ocean-Sampling_GS-33-01-01-1... 44 5.2 1
(ER054653) 1095521727169 Global-Ocean-Sampling_GS-33-01-01-1... 44 5.2 1
(ER036464) 1095521480485 Global-Ocean-Sampling_GS-33-01-01-1... 44 5.2 1
(ER010585) 1095521393347 Global-Ocean-Sampling_GS-33-01-01-1... 44 5.2 1
(ER007000) 1095521380586 Global-Ocean-Sampling_GS-33-01-01-1... 44 5.2 1
(EK960020) 1095516158956 Global-Ocean-Sampling_GS-33-01-01-1... 44 5.2 1
(EK875233) 1093018105697 Global-Ocean-Sampling_GS-33-01-01-1... 44 5.2 1
(EK847462) 1093017751342 Global-Ocean-Sampling_GS-33-01-01-1... 44 5.2 1
(EK815142) 1093017228776 Global-Ocean-Sampling_GS-33-01-01-1... 44 5.2 1
(EK810794) 1093017216819 Global-Ocean-Sampling_GS-33-01-01-1... 44 5.2 1
(EK700553) 1092403998757 Global-Ocean-Sampling_GS-33-01-01-1... 44 5.2 1
(EK685227) 1092402559439 Global-Ocean-Sampling_GS-33-01-01-1... 44 5.2 1
(EK664390) 1092354901720 Global-Ocean-Sampling_GS-33-01-01-1... 44 5.2 1
(EK631070) 1092351137520 Global-Ocean-Sampling_GS-33-01-01-1... 44 5.2 1
(EK593865) 1092343741858 Global-Ocean-Sampling_GS-33-01-01-1... 44 5.2 1
(CJ426888) Molgula tectiformis cDNA, larva clone:mtlv028c11,... 44 5.2 1
(CJ422915) Molgula tectiformis cDNA, larva clone:mtlv011j16,... 44 5.2 1
(CJ421934) Molgula tectiformis cDNA, larva clone:mtlv008m06,... 44 5.2 1
(CJ417644) Molgula tectiformis cDNA, larva clone:mtlv028c11,... 44 5.2 1
(CJ412075) Molgula tectiformis cDNA, larva clone:mtlv011j16,... 44 5.2 1
(CJ411111) Molgula tectiformis cDNA, larva clone:mtlv008m06,... 44 5.2 1
(CJ387570) Molgula tectiformis cDNA, gastrula/neurula clone:... 44 5.2 1
(CJ386436) Molgula tectiformis cDNA, gastrula/neurula clone:... 44 5.2 1
(CJ385155) Molgula tectiformis cDNA, gastrula/neurula clone:... 44 5.2 1
(CJ383151) Molgula tectiformis cDNA, gastrula/neurula clone:... 44 5.2 1
(CJ382513) Molgula tectiformis cDNA, gastrula/neurula clone:... 44 5.2 1
(CJ381803) Molgula tectiformis cDNA, gastrula/neurula clone:... 44 5.2 1
(CJ376997) Molgula tectiformis cDNA, gastrula/neurula clone:... 44 5.2 1
(CJ376914) Molgula tectiformis cDNA, gastrula/neurula clone:... 44 5.2 1
(CJ375847) Molgula tectiformis cDNA, gastrula/neurula clone:... 44 5.2 1
(CJ372548) Molgula tectiformis cDNA, gastrula/neurula clone:... 44 5.2 1
(CJ371915) Molgula tectiformis cDNA, gastrula/neurula clone:... 44 5.2 1
(CJ371898) Molgula tectiformis cDNA, gastrula/neurula clone:... 44 5.2 1
(CJ371189) Molgula tectiformis cDNA, gastrula/neurula clone:... 44 5.2 1
(CJ366440) Molgula tectiformis cDNA, gastrula/neurula clone:... 44 5.2 1
(CJ343543) Molgula tectiformis cDNA, embryo just before hatc... 44 5.2 1
(CJ341177) Molgula tectiformis cDNA, embryo just before hatc... 44 5.2 1
(CJ339872) Molgula tectiformis cDNA, embryo just before hatc... 44 5.2 1
(CJ333548) Molgula tectiformis cDNA, embryo just before hatc... 44 5.2 1
(CJ331344) Molgula tectiformis cDNA, embryo just before hatc... 44 5.2 1
(CJ330079) Molgula tectiformis cDNA, embryo just before hatc... 44 5.2 1
(FF605911) G825P5125FC3.T0 Acorn worm normalized gastrula pE... 44 5.2 1
(EY177327) CBTI5944.g1_P21.ab1:P Triphysaria pusilla root ti... 44 5.2 1
(EY165993) CBTI10899.g1_F13.ab1:P Triphysaria pusilla root t... 44 5.2 1
(EY151073) CBTN12955.g1_E24.ab1:P Triphysaria pusilla root t... 44 5.2 1
(CJ409884) Molgula tectiformis cDNA, larva clone:mtlv005b21,... 34 5.2 2
(BQ916628) QHB18I07.yg.ab1 QH_ABCDI sunflower RHA801 Heliant... 30 5.5 3
(AQ502452) V46B6 mTn-3xHA/lacZ Insertion Library Saccharomyc... 38 5.6 2
(CJ368063) Molgula tectiformis cDNA, gastrula/neurula clone:... 34 5.6 2
(CJ330391) Molgula tectiformis cDNA, embryo just before hatc... 34 5.7 2
(CO535391) tai01h05.y1 HyEch JUMY T1 Hydractinia echinata cD... 38 6.1 2
(CJ362922) Molgula tectiformis cDNA, cleaving embryo clone:m... 34 6.3 2
(CJ340087) Molgula tectiformis cDNA, embryo just before hatc... 34 6.4 2
(CJ378627) Molgula tectiformis cDNA, gastrula/neurula clone:... 34 6.4 2
(CJ361578) Molgula tectiformis cDNA, cleaving embryo clone:m... 34 6.5 2
(CJ377014) Molgula tectiformis cDNA, gastrula/neurula clone:... 34 6.5 2
(CJ337374) Molgula tectiformis cDNA, embryo just before hatc... 34 6.7 2
(CJ330286) Molgula tectiformis cDNA, embryo just before hatc... 34 6.7 2
(BY814337) Thellungiella halophila cDNA clone: RTFL01-21-J11... 38 6.8 2
(CJ340193) Molgula tectiformis cDNA, embryo just before hatc... 34 6.8 2
(CJ379552) Molgula tectiformis cDNA, gastrula/neurula clone:... 34 6.8 2
(CJ352459) Molgula tectiformis cDNA, cleaving embryo clone:m... 34 6.9 2
(AK108809) Oryza sativa Japonica Group cDNA clone:002-151-D0... 36 6.9 2
(CJ351139) Molgula tectiformis cDNA, cleaving embryo clone:m... 34 7.1 2
(AQ873683) V73G1 mTn-3xHA/lacZ Insertion Library, strain AB9... 38 7.8 2
(FF706748) XABT28135.fwd Gateway compatible cien cDNA librar... 34 7.8 2
(CP000575) Staphylothermus marinus F1, complete genome. 30 8.0 2
(AJ416422) Mytilus chilensis h1 gene for histone H1. 34 9.7 2
(AJ416425) Mytilus trossulus h1 gene for histone H1. 34 9.8 2
(AJ416424) Mytilus galloprovincialis h1 gene for histone H1. 34 9.8 2
(AJ416423) Mytilus edulis h1 gene for histone H1. 34 9.8 2
(AJ416421) Mytilus californianus h1 gene for histone H1. 34 9.8 2
>(U50904) Dictyostelium discoideum histone H1 mRNA, complete cds.
Length = 865
Score = 876 bits (442), Expect = 0.0
Identities = 442/442 (100%)
Strand = Plus / Plus
Query: 91 ttatcaagttatgattagtacagcaattgcacattataaggatagaactggttcatctca 150
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 245 ttatcaagttatgattagtacagcaattgcacattataaggatagaactggttcatctca 304
Query: 151 accagccattattaaatacattgaagccaattacaatgttgcaccagatactttcaaaac 210
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 305 accagccattattaaatacattgaagccaattacaatgttgcaccagatactttcaaaac 364
Query: 211 tcaattaaaacttgcactcaaacgtttagttgccaaaggtactcttacaatggtcaaagc 270
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 365 tcaattaaaacttgcactcaaacgtttagttgccaaaggtactcttacaatggtcaaagc 424
Query: 271 cagttacaaattatcagaagaaggtaaaaaggaacaccaagccactcttggtccagttgc 330
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 425 cagttacaaattatcagaagaaggtaaaaaggaacaccaagccactcttggtccagttgc 484
Query: 331 aaagaaaccaaaagccaagactaccgctacttcaactgaaacaactgccgctccaccagc 390
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 485 aaagaaaccaaaagccaagactaccgctacttcaactgaaacaactgccgctccaccagc 544
Query: 391 tactccaaccaaaaaagctgcaccaaagaaaccagctgctaaagctgcttcaacctcaac 450
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 545 tactccaaccaaaaaagctgcaccaaagaaaccagctgctaaagctgcttcaacctcaac 604
Query: 451 caaaactgccgctgctaaaaagaactctgctaaagtaaccaaagcagttagtaagaagcc 510
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 605 caaaactgccgctgctaaaaagaactctgctaaagtaaccaaagcagttagtaagaagcc 664
Query: 511 agctgctaaaaaagctccaagt 532
||||||||||||||||||||||
Sbjct: 665 agctgctaaaaaagctccaagt 686
Lambda K H
1.37 0.711 1.31
Matrix: blastn matrix:1 -3
Number of Sequences: 98226423
Number of Hits to DB: 502,090,749
Number of extensions: 26966307
Number of successful extensions: 2010867
Number of sequences better than 10.0: 173
Length of query: 532
Length of database: 98,766,808,389
Length adjustment: 23
Effective length of query: 509
Effective length of database: 96,507,600,660
Effective search space: 49122368735940
Effective search space used: 49122368735940
X1: 11 (21.8 bits)
S2: 22 (44.1 bits)
Dictyostelium discoideum cDNA Project Home