<List of Series> <Series: SLB8-B> <Clone: SLB835> <SEQ> <Translated> <CSM> <DNA> <Protein> <Genome> <PSORT> <MOTIF>

Dictyostelium discoideum cDNA Clone SLB835

Dictyostelium discoideum cDNA Project Home
Size:		1.5k
3' sequence:	TM980419
5' sequence:	TM981204
Whole insert?:	*
Accession #:	
Remarks:	*

Sequence SLB835

ATTTTTTTCA AAAACTCTCT TTAGTGTTGT TATAGTAAAA AAAAAAAAGA
AAAAGAAAAA AAAAGAAAAA AAACTATATA GAACAAGAAA AAAAAAAAAA
AAATGGAAAT TGGTACAAGT TCAACAACTA ATAATATTGG TGTGGCACCA
ACAATACCAC AAGATATTGT AAATAATAAT AATCATAATA ATAATAGTAG
TAATAATAGT AGTAATAATA ATAGTATATC ATCATCACCA ACTGATTCAT
CACAATTAAT GAATGGGGAA CAATCAACAT CACCACCATC ACCACCTATT
GAAGAAGTTT TAGAGGAAGA ACCAAGAAAT TTATTGATTT CATTATTATC
AGAATTAAAG ATTGGTGTTG ATTTATCAAG AGTACCATTA CCAACCTTTA
TATTAGAACC AAGATCATTA TTGGAGAAAT TTACAGATAA TATGATTCAT
GGTGAAATTT TATGTAATTT ATCAAAATTA GAGTCACCAA TGGATAGAAT
GCATTTAATT ACAAAATGGT ATTTATCTGC TTTTCATTAT AGAAAGAAAG
GTTTACAAAA ACCTTATAAT CCAATTTTAG GTGAAATTTT TAGAACTAGA
TGGGAATTTA AAGAAACAAA TAGTAATTGT ATAATGGTTG CAGAACAAAT
TTCACATCAT CCACCAGTTT CNTGGTATTT ATTTATCAAA TAGAAAGGAT
GGATATACAA TGACTGGTAC AATTAATCCA CGTTCGAAAT TTTTAGGTAA
TTCAATGGCA GTGATAGTGG ATGGTAGTAG TACATTAACA TTATTAGGAC
TTCAAGAGGA ATATGTTATT ACCTTTCCTA CAGCGGTGGC AAGAGGTATT
ATATTTGGTA CATTGTTAAC AGAGATTGTG GGCAATTCAA CGATATCATG
TAAACAAACC AATATAAAAG TTGAAATGGA TTTTAAAGCA AAACCAATGT
TTGGTGGTGA ATATAATGTA GTTTGTGGTA AAATTAAAAA AGGTAATGAA
ACAACTCATA CATTTAATGG AAAATGGGAT AAAAAAGTTG AAATCACTTT
ATCATCGTCG TCATCATCAT CAAAGAAAAA GAATGGATCT ACAAATGATA
TTTTATGGGA TTGTAATGAT GCAGTTAAAA CTCAAATGAT AACGAGACAA
ATCTCTGAAC AAGAAGAATT TGAATCTCAA AGATTATGGC AAAAAGTTTC
ACATGCAATC ATAAAGAAAA ATCAAAAAGA TGCAACATTT GAAAAGAATA
AATTAGAAGA TGAACAAAGA AAAAGAGTAA AAGATAGAAA AGAAAATAAT
ATAGAATGGG AACCAAGATT ATTTAAAAAA GTTAATGATC AATGGATTTA
TAAATATCAA AATCATACAC TTTATGATCA AAATGAACCA AAAGAAATTG
AAACTGATGG TATAATTCAT TTTGAAGGTA CATTAATTAA AAAAGAATCA
AAACAAAATT TAGTTGAAAA ATGTGGTGCA AGTGAAAATG AAATAATTGT
TTAG

Translated Amino Acid Sequence SLB835

<All Frames> 
ffsktlfsvvivkkkkkkkkkekklyrtrkkkkkwklvqvqqliilvwhqqyhkil*iii
iiiiivviivviiivyhhhqlihhn**mgnnqhhhhhhllkkf*rknqeiy*fhyyqn*r
lvliyqeyhyqply*nqdhywrnlqii*fmvkfyviyqn*shqwieci*lqngiyllfii
erkvyknliiqf*vkfleldgnlkkqiviv*WLQNKFHIIHQFXGIYLSNRKDGYTMTGT
INPRSKFLGNSMAVIVDGSSTLTLLGLQEEYVITFPTAVARGIIFGTLLTEIVGNSTISC
KQTNIKVEMDFKAKPMFGGEYNVVCGKIKKGNETTHTFNGKWDKKVEITLSSSSSSSKKK
NGSTNDILWDCNDAVKTQMITRQISEQEEFESQRLWQKVSHAIIKKNQKDATFEKNKLED
EQRKRVKDRKENNIEWEPRLFKKVNDQWIYKYQNHTLYDQNEPKEIETDGIIHFEGTLIK
KESKQNLVEKCGASENEIIV*


Homology SLB835 vs CSM-cDNA

<more CSM info> 
Sequences producing significant alignments:                      (bits) Value


SLB835 (SLB835Q) /CSM/SL/SLB8-B/SLB835Q.Seq.d/                       2028   0.0
AFA355 (AFA355Q) /CSM/AF/AFA3-C/AFA355Q.Seq.d/                        749   0.0
FC-IC0810 (FC-IC0810Q) /CSM/FC-IC/FC-IC0810Q.Seq.d/                   634   0.0
SSE223 (SSE223Q) /CSM/SS/SSE2-A/SSE223Q.Seq.d/                         52   3e-05
SSB566 (SSB566Q) /CSM/SS/SSB5-C/SSB566Q.Seq.d/                         52   3e-05
SSA108 (SSA108Q) /CSM/SS/SSA1-A/SSA108Q.Seq.d/                         52   3e-05
SLA367 (SLA367Q) /CSM/SL/SLA3-C/SLA367Q.Seq.d/                         52   3e-05
SLK639 (SLK639Q) /CSM/SL/SLK6-B/SLK639Q.Seq.d/                         50   1e-04
VHO680 (VHO680Q) /CSM/VH/VHO6-D/VHO680Q.Seq.d/                         46   0.002
VHK555 (VHK555Q) /CSM/VH/VHK5-C/VHK555Q.Seq.d/                         46   0.002


Homology SLB835 vs DNA

<more DNA info> 
Sequences producing significant alignments:                  (bits) Value  N


AC115579|AC115579.2 Dictyostelium discoideum chromosome 2 ma...  1150   0.0    10
AL445564|AL445564.1 Mycoplasma pulmonis (strain UAB CTIP) co...    38   9e-10  23
AC116305|AC116305.2 Dictyostelium discoideum chromosome 2 ma...    36   2e-09  27
AC116960|AC116960.2 Dictyostelium discoideum chromosome 2 ma...    44   2e-09  19
AC116977|AC116977.2 Dictyostelium discoideum chromosome 2 ma...    36   3e-09  24
AC114263|AC114263.2 Dictyostelium discoideum chromosome 2 ma...    50   4e-09  18
AC116957|AC116957.2 Dictyostelium discoideum chromosome 2 ma...    38   5e-09  24
AC116986|AC116986.2 Dictyostelium discoideum chromosome 2 ma...    38   2e-08  22
AC116330|AC116330.2 Dictyostelium discoideum chromosome 2 ma...    34   3e-08  17
AC116984|AC116984.2 Dictyostelium discoideum chromosome 2 ma...    34   5e-08  31


Homology SLB835 vs Protein

<more Protein info> 
Sequences producing significant alignments:                      (bits) Value


(Q86KG4) RecName: Full=Oxysterol-binding protein 4; AltName: Ful...   536   0.0
AJ278263_1(AJ278263|pid:none) Mus musculus domesticus mRNA for o...   185   2e-80
AJ276505_1(AJ276505|pid:none) Mus musculus genomic fragment, 281...   185   2e-80
(Q9H0X9) RecName: Full=Oxysterol-binding protein-related protein...   182   1e-77
AB040967_1(AB040967|pid:none) Homo sapiens mRNA for KIAA1534 pro...   182   1e-77
AK293000_1(AK293000|pid:none) Homo sapiens cDNA FLJ78486 complet...   182   1e-77
AK301003_1(AK301003|pid:none) Homo sapiens cDNA FLJ51506 complet...   182   1e-77
BX647211_1(BX647211|pid:none) Homo sapiens mRNA; cDNA DKFZp686C0...   174   2e-75
CR749542_1(CR749542|pid:none) Homo sapiens mRNA; cDNA DKFZp686A1...   174   2e-75
CR858950_1(CR858950|pid:none) Pongo abelii mRNA; cDNA DKFZp469P0...   173   3e-75


Homology SLB835 vs Genome

<more Genome info> 





<List of Series> <Series: SLB8-B> <Clone: SLB835> <SEQ> <Translated> <CSM> <DNA> <Protein> <Genome> <PSORT> <MOTIF>





Dictyostelium discoideum cDNA Project Home