<List of Series> <Series: SLB6-B> <Clone: SLB626> <SEQ> <Translated> <CSM> <DNA> <Protein> <Genome> <PSORT> <MOTIF>
Dictyostelium discoideum cDNA Clone SLB626
Dictyostelium discoideum cDNA Project Home
Size: 2.0k
3' sequence: TM980410
5' sequence: TM990117
Whole insert?: *
Accession #:
Remarks: *
Sequence SLB626
GCGAAAAGTC AGAGGTTCGA ATCCTCTTTA GGAGAATGAA ATTTTGAGGG
TATAGCTTAA GTGGTTAGAG TATTGGATTG TGACTTCAAA GATACCGGTT
CGAGTCCGGT TACCNNCCCA AAAAAAGAAA AAAATACAGA TGATAATTAG
ATTTAAAATA AATGAAATAG AATGTGAAGT AAATGAAGAA AAAGAAGATA
TAACAATATT ACAAGCGTGT ACGGCAAATG GAATAGAAAT CCCACGATTT
TGTTATCATG AAAAGTTAAC AATAGCAGGA AATTGTCGAA TGTGTTTAGT
ATATGTTACA AATGAAGAAA AATTATTAGC CGCTTGTGGA ATACCGTTAG
ATGAGAATTT TGACGATGAA AGTATAGAAA CGGAAATAGA TGAAATATTA
AAAGCAAGAG AAGGAGTAAT GGAATTTTTA TTAATAAATC ATCCATTAGA
TTGTCCAATT TGTGATCAAG GAGGAGAATG TGATTTACAA GAGCAAACAC
TAGCGTATGG ATTAGATACT GGAAGATTTT ATATAAAAAA AAGAGCAGTA
GAAATAAAAA CATTTGG--- -------GTT TATTAACTAG AATTTCATTA
ACATTACAAG AAATGCGAGC GATTTTCATG AAAGCATGTA ATTTAAAACC
AGAAAATATA TTAATAATAA CACAAGGAGC AAATTTTGGA ATGGCATTAG
AAGAAGGACT ATTTAAAGAA AAGTTTAGTA TAGGAGGAAA TGTCTTATAT
AGTATAGATA GTAATGAAGT ACAAGTAACA AATAAAATAA ATTATGTAAT
TTATCAAGGA ATTATAAATG ATAAATTTGA AAATAAAATC GATTTATATT
TACCAAGTAA ACATTATTTT GAAGATTTTG AAGGAGATAG AGAAGTTTAT
ATGAATACTT TTGGACAACG AAGTGAAATT GAGAAATTAA GCATAAGTAA
AGGAAATAAA ATAAAAGAAA ATAGCATGAT TGGATATATC CAATTAATGT
ATTTAAATAA TAAAGAAATG ACAAG
Translated Amino Acid Sequence SLB626
<All Frames>
rkvrgsnpl*eneilrv*LKWLEYWIVTSKIPVRVRLPXQKKKKIQMIIRFKINEIECEV
NEEKEDITILQACTANGIEIPRFCYHEKLTIAGNCRMCLVYVTNEEKLLAACGIPLDENF
DDESIETEIDEILKAREGVMEFLLINHPLDCPICDQGGECDLQEQTLAYGLDTGRFYIKK
RAVEIKTF---
---LLTRISLTLQEMRAIFMKACNLKPENILIITQGANFGMALEEGLFKEKFSIGGNVLY
SIDSNEVQVTNKINYVIYQGIINDKFENKIDLYLPSKHYFEDFEGDREVYMNTFGQRSEI
EKLSISKGNKIKENSMIGYIQLMYLNNKEMT
Homology SLB626 vs CSM-cDNA
<more CSM info>
Sequences producing significant alignments: (bits) Value
SLB626 (SLB626Q) /CSM/SL/SLB6-B/SLB626Q.Seq.d/ 1659 0.0
MIT-GENOME (MIT-GENOMEQ) /CSM/OTHERS/MIT-GENOMEQ.Seq.d/ 888 0.0
VFC470 (VFC470Q) /CSM/VF/VFC4-C/VFC470Q.Seq.d/ 757 0.0
VFO496 (VFO496Q) /CSM/VF/VFO4-D/VFO496Q.Seq.d/ 720 0.0
SLD207 (SLD207Q) /CSM/SL/SLD2-A/SLD207Q.Seq.d/ 720 0.0
VSB356 (VSB356Q) /CSM/VS/VSB3-C/VSB356Q.Seq.d/ 682 0.0
VSI207 (VSI207Q) /CSM/VS/VSI2-A/VSI207Q.Seq.d/ 674 0.0
FC-IC0660 (FC-IC0660Q) /CSM/FC-IC/FC-IC0660Q.Seq.d/ 617 e-175
FC-IC0649 (FC-IC0649Q) /CSM/FC-IC/FC-IC0649Q.Seq.d/ 385 e-105
FC-IC1219 (FC-IC1219Q) /CSM/FC-IC/FC-IC1219Q.Seq.d/ 222 8e-57
Homology SLB626 vs DNA
<more DNA info>
Sequences producing significant alignments: (bits) Value N
(U02291) Dictyostelium discoideum mitochondrial NADH:ubiquin... 676 0.0 5
(AB000109) Dictyostelium discoideum mitochondrial DNA, compl... 676 0.0 5
(DQ336395) Dictyostelium citrinum mitochondrion, complete ge... 478 0.0 6
(AU060829) Dictyostelium discoideum slug cDNA, clone SLB626. 676 0.0 3
(AU033930) Dictyostelium discoideum slug cDNA, clone SLB626. 398 0.0 2
(AU268318) Dictyostelium discoideum vegetative cDNA clone:VS... 656 0.0 2
(BJ411750) Dictyostelium discoideum cDNA clone:ddv5l18, 5' e... 676 0.0 1
(AU268319) Dictyostelium discoideum vegetative cDNA clone:VS... 650 0.0 2
(AU271765) Dictyostelium discoideum gamete cDNA clone:FC-IC0... 609 e-177 2
(AU052368) Dictyostelium discoideum slug cDNA, clone SLD207. 369 e-161 3
Homology SLB626 vs Protein
<more Protein info>
Sequences producing significant alignments: (bits) Value
(Q2LCP5) RecName: Full=NADH-ubiquinone oxidoreductase 75 kDa sub... 247 7e-64
AY700145_25(AY700145|pid:none) Polysphondylium pallidum mitochon... 209 2e-52
EU275727_44(EU275727|pid:none) Dictyostelium fasciculatum strain... 207 1e-51
GU828005_43(GU828005|pid:none) Hartmannella vermiformis mitochon... 164 7e-39
CP001759_513(CP001759|pid:none) Anaplasma centrale str. Israel, ... 158 4e-37
(O21241) RecName: Full=NADH-ubiquinone oxidoreductase 75 kDa sub... 157 7e-37
CP000774_3203(CP000774|pid:none) Parvibaculum lavamentivorans DS... 157 7e-37
CP000030_440(CP000030|pid:none) Anaplasma marginale str. St. Mar... 157 1e-36
CP000235_676(CP000235|pid:none) Anaplasma phagocytophilum HZ, co... 155 4e-36
AB546637_2(AB546637|pid:none) Heterosigma akashiwo mitochondrial... 154 6e-36
Homology SLB626 vs Genome
<more Genome info>
<List of Series> <Series: SLB6-B> <Clone: SLB626> <SEQ> <Translated> <CSM> <DNA> <Protein> <Genome> <PSORT> <MOTIF>
Dictyostelium discoideum cDNA Project Home