Dictyostelium discoideum cDNA Clone SLB349

Size:		1.4k
3' sequence:	TM980401
5' sequence:	*
Whole insert?:	*
Accession #:	
Remarks:	*

Sequence SLB349

---------- TTCTTCACCC AGAAATTGTT TGGGATTTTA GACTACCACG
TGTTAAATCA ATTAATGGCT CTGGTCATAA ATTTGGTCTA TCTCCATTGG
GAGTTGGCTG GGTCGTATGG AGAGGTAAAA ATGACATTCA CAAGGATTTG
GTATTCGATG TCAACTATCT TGGTGGCAAT ATGCCAACAT TTTCATTGAA
TTTCTCACGT CCAGGTGGTC AAATAGTATG CCAGTACTAT AACTTTTTGC
GCCATGGTCG TAGTGGATAT ACCGCAGTTC ATCAAGCTTG TCTAGATCAT
GGTATTTTCA TTTCCAAGCA AGTTAAAAAA CACGGTATTT TTGATATTGT
TTATGATGGT ACTGGTGCAC TTCCAGGTGC ATGCTGGAAA TTGAAAAAAG
ATGCAAAAGT AAAATTCAAT CTCTTTGACC TTTCAGATAG AATGAGAAAT
AGAGGTTGGC AAATTGCATC CTATACTCTA CCAAACTTAC CAGATATTGT
AGTTCAAAGA GTATTAATTA GACATGGTTT CAGTCATGAT ATGGCAATGC
TCTTAATTGA AGATTTCAAT CGTAGTATTG AATATTTTGA TAAACATCCA
ATGGTTCAAA GTATTTCAAA AGATGAAGGT CAATCATTCC ATCATTAAAA
TT

Translated Amino Acid Sequence SLB349

---LHPEIVWDFRLPRVKSINGSGHKFGLSPLGVGWVVWRGKNDIHKDLVFDVNYLGGNM
PTFSLNFSRPGGQIVCQYYNFLRHGRSGYTAVHQACLDHGIFISKQVKKHGIFDIVYDGT
GALPGACWKLKKDAKVKFNLFDLSDRMRNRGWQIASYTLPNLPDIVVQRVLIRHGFSHDM
AMLLIEDFNRSIEYFDKHPMVQSISKDEGQSFHH*n

Homology SLB349 vs CSM-cDNA

Sequences producing significant alignments:                      (bits) Value


SLB349 (SLB349Q) /CSM/SL/SLB3-C/SLB349Q.Seq.d/                       1273   0.0
SSE705 (SSE705Q) /CSM/SS/SSE7-A/SSE705Q.Seq.d/                       1257   0.0
SLB722 (SLB722Q) /CSM/SL/SLB7-A/SLB722Q.Seq.d/                       1257   0.0
SSF349 (SSF349Q) /CSM/SS/SSF3-C/SSF349Q.Seq.d/                       1249   0.0
SFJ443 (SFJ443Q) /CSM/SF/SFJ4-B/SFJ443Q.Seq.d/                       1225   0.0
SLH288 (SLH288Q) /CSM/SL/SLH2-D/SLH288Q.Seq.d/                       1221   0.0
SFG506 (SFG506Q) /CSM/SF/SFG5-A/SFG506Q.Seq.d/                       1221   0.0
CHC349 (CHC349Q) /CSM/CH/CHC3-C/CHC349Q.Seq.d/                       1221   0.0
SFD334 (SFD334Q) /CSM/SF/SFD3-B/SFD334Q.Seq.d/                       1219   0.0
SFG840 (SFG840Q) /CSM/SF/SFG8-B/SFG840Q.Seq.d/                       1213   0.0

Homology SLB349 vs DNA

Sequences producing significant alignments:                  (bits) Value  N


(AU033714) Dictyostelium discoideum slug cDNA, clone SLB349.     1273   0.0    1
(AU034007) Dictyostelium discoideum slug cDNA, clone SLB722.     1257   0.0    1
(C84710) Dictyostelium discoideum slug cDNA, clone SSE705.       1257   0.0    1
(C92791) Dictyostelium discoideum slug cDNA, clone SSF349.       1249   0.0    1
(AU039255) Dictyostelium discoideum slug cDNA, clone SLH288.     1221   0.0    1
(C92830) Dictyostelium discoideum slug cDNA, clone SSF452.       1211   0.0    1
(BJ401761) Dictyostelium discoideum cDNA clone:dds19f12, 3' ...  1201   0.0    2
(AU051981) Dictyostelium discoideum slug cDNA, clone SSC841.     1162   0.0    1
(BJ402251) Dictyostelium discoideum cDNA clone:dds20p23, 3' ...  1156   0.0    3
(BJ400719) Dictyostelium discoideum cDNA clone:dds14p10, 3' ...  1156   0.0    2

Homology SLB349 vs Protein

Sequences producing significant alignments:                      (bits) Value


(Q54IJ3) RecName: Full=Glutamate decarboxylase B;          EC=4....   325   1e-87
CP000789_2953(CP000789|pid:none) Vibrio harveyi ATCC BAA-1116 ch...   291   2e-77
FM178379_1197(FM178379|pid:none) Aliivibrio salmonicida LFI1238 ...   290   3e-77
CP000020_1061(CP000020|pid:none) Vibrio fischeri ES114 chromosom...   283   4e-75
CP001358_45(CP001358|pid:none) Desulfovibrio desulfuricans subsp...   280   3e-74
CP000851_2941(CP000851|pid:none) Shewanella pealeana ATCC 700345...   273   4e-72
AM942759_1390(AM942759|pid:none) Proteus mirabilis strain HI4320...   272   9e-72
CR522870_385(CR522870|pid:none) Desulfotalea psychrophila LSv54 ...   271   2e-71
AM167904_2795(AM167904|pid:none) Bordetella avium 197N complete ...   261   2e-68
CP000608_56(CP000608|pid:none) Francisella tularensis subsp. tul...   242   9e-63

Homology SLB349 vs Genome