Dictyostelium discoideum cDNA Clone SLB248

Size:		1348
3' sequence:	TM980327
5' sequence:	TM981203
Whole insert?:	Y
Accession #:	
Remarks:	*

Sequence SLB248

GTTTAACTGC GTTAATGGAT CCACCACGTC CAGGTGTACC AGAAGCCATT
AGAACTTGTA AAGAAGCAGG TATTAGAGTT ATGATGGTAA CTGGTGATCA
TCCATTGACT GGAACAGCAA TTGCAAAGCA AGTAGGTATC ATTGAAACTG
ATGAAACTCT TAATGATATT GCTGAAAGAG AAGGTGTTGA TGTACTTAGT
TTGGACTTTT CACGTGGTAC CTCTATTGCC ATTACAGGCT CAATGTTGGA
TGATCTCACT AGTGAACAGT GGGACAAGAT ACTTTCCCTA AGAGAACTAT
GCTTTTGTAG AACCAGCCCA GAACAGAAAT TACAAATTGT CGCACACCTT
CAAAAACGAG GAGAAATTGT AGCAGTTACT GGTGATGGTG TCAATGATTC
ACCTGCTCTC AAGAAGGCTG ATTTAGGTTG TGCTATGGGT ATCACTGGTA
GTGATGTAGC AAAAGAAGCA GCATCAATTG TTTTATTGGA TGATAATTTT
GCATCAATTA TCGCTGGTGT AGAAGAAGGT CGTATGATTT TCGATAAATT
AAAGAAATCA ATTTGTTACA CTCTCTCTTC AAATATTCCA GAGGCAATTC
CATTCTTTTG TTTCTTTGTA CTTCAAATGC CAGTAGCTTT ATCAGGTATT
TTAATTCTTT GTATAGATTT GGGTACTGAT CTTATTCCTG TAATATCTTA
TGCATACGAA GGTAGTGAAA CTGATCTCAT GAAAAGAAAA CCAAGAAATG
TTAAAAAAGA TAAATTGGTT AGTCTTAGAT TGGCTATTTT CTCTTATCTC
TGGTTAGGTT GTTGGCAATG TGCTGCTGGT TTCTTAAATT ATTTCCTCCT
TTTCAAGGAT TATGGATATA GTGCTTCCGA CCTTTACAAT GTTTCCTCTA
CCTATTTCAA GAAAGATGCT CCACTTTATG GAGGTCATGA TGATGCTAAA
CAAATTCAAA TTTTAAATGA AGCTCAAACT GCATATTTCA TCGCGATTGT
AATAAGTAGA GTTGGGGCTT GTTTCTGCGC TAAAACTAGA ATCATTTCAA
TTTTCCAACA AGGTTTCGGT AATATGGTAT TCAATTTCGG TGTTTGTTCT
ATGCTTGCCA TTGCTCTATT CATTGTTCAT GTACCAGGTG TTAGAACTTT
CTTTGGTTGT ACTATTGTCA GTTATAAATA TTGGTTAATT CCAATTCCTT
TTGCTGTATT TTTGGTTGCA TCAAATGAAT TGAGACTTTG GTTAATAAGA
AGATATCCAA AGTCTACATT TGCTAATCTT TGTGCTTGGT AAATTAAATT
AAAATAATAT AATAAATATA AATATAAAAA TATCATATAA AAAAAAAA

Translated Amino Acid Sequence SLB248

LTALMDPPRPGVPEAIRTCKEAGIRVMMVTGDHPLTGTAIAKQVGIIETDETLNDIAERE
GVDVLSLDFSRGTSIAITGSMLDDLTSEQWDKILSLRELCFCRTSPEQKLQIVAHLQKRG
EIVAVTGDGVNDSPALKKADLGCAMGITGSDVAKEAASIVLLDDNFASIIAGVEEGRMIF
DKLKKSICYTLSSNIPEAIPFFCFFVLQMPVALSGILILCIDLGTDLIPVISYAYEGSET
DLMKRKPRNVKKDKLVSLRLAIFSYLWLGCWQCAAGFLNYFLLFKDYGYSASDLYNVSST
YFKKDAPLYGGHDDAKQIQILNEAQTAYFIAIVISRVGACFCAKTRIISIFQQGFGNMVF
NFGVCSMLAIALFIVHVPGVRTFFGCTIVSYKYWLIPIPFAVFLVASNELRLWLIRRYPK
STFANLCAW*iklk*ynkykyknii*kk

Homology SLB248 vs CSM-cDNA

Sequences producing significant alignments:                      (bits) Value


SLB248 (SLB248Q) /CSM/SL/SLB2-B/SLB248Q.Seq.d/                       2555   0.0
SHD890 (SHD890Q) /CSM/SH/SHD8-D/SHD890Q.Seq.d/                       1390   0.0
SHA628 (SHA628Q) /CSM/SH/SHA6-B/SHA628Q.Seq.d/                       1386   0.0
AHB320 (AHB320Q) /CSM/AH/AHB3-A/AHB320Q.Seq.d/                       1378   0.0
AHE453 (AHE453Q) /CSM/AH/AHE4-C/AHE453Q.Seq.d/                       1370   0.0
VFC718 (VFC718Q) /CSM/VF/VFC7-A/VFC718Q.Seq.d/                       1366   0.0
SHK293 (SHK293Q) /CSM/SH/SHK2-D/SHK293Q.Seq.d/                       1364   0.0
AHJ887 (AHJ887Q) /CSM/AH/AHJ8-D/AHJ887Q.Seq.d/                       1336   0.0
SHA284 (SHA284Q) /CSM/SH/SHA2-D/SHA284Q.Seq.d/                       1263   0.0
SHB228 (SHB228Q) /CSM/SH/SHB2-B/SHB228Q.Seq.d/                       1257   0.0

Homology SLB248 vs DNA

Sequences producing significant alignments:                  (bits) Value  N


(BJ405467) Dictyostelium discoideum cDNA clone:dds31d24, 3' ...  1390   0.0    1
(BJ403499) Dictyostelium discoideum cDNA clone:dds25g08, 3' ...  1386   0.0    1
(BJ348394) Dictyostelium discoideum cDNA clone:dda33h05, 3' ...  1378   0.0    1
(BJ350368) Dictyostelium discoideum cDNA clone:dda39j14, 3' ...  1370   0.0    1
(BJ430087) Dictyostelium discoideum cDNA clone:ddv6d05, 3' e...  1366   0.0    1
(BJ353638) Dictyostelium discoideum cDNA clone:dda50n22, 3' ...  1336   0.0    1
(AU060727) Dictyostelium discoideum slug cDNA, clone SLB248.     1326   0.0    1
(BJ408151) Dictyostelium discoideum cDNA clone:dds44i24, 3' ...  1314   0.0    2
(AU033631) Dictyostelium discoideum slug cDNA, clone SLB248.     1265   0.0    1
(BJ403801) Dictyostelium discoideum cDNA clone:dds26g08, 3' ...  1235   0.0    2

Homology SLB248 vs Protein

Sequences producing significant alignments:                      (bits) Value


T18717(T18717) hypothetical protein B0365.3 - Caenorhabditis ele...   380   e-103
(Q9WV27) RecName: Full=Sodium/potassium-transporting ATPase subu...   378   e-103
AF164349_1(AF164349|pid:none) Mus musculus strain CD-1 Na,K-ATPa...   378   e-103
AY140650_1(AY140650|pid:none) Homarus americanus putative Na+/K+...   377   e-102
(Q13733) RecName: Full=Sodium/potassium-transporting ATPase subu...   376   e-102
HB975106_1(HB975106|pid:none) Sequence 107781 from Patent EP2096...   376   e-102
AY734484_1(AY734484|pid:none) Hirudo medicinalis Na,K ATPase alp...   375   e-102
JI166042_1(JI166042|pid:none) TSA: Ascaris suum ASCP_642_3142 mR...   374   e-102
BC087015_1(BC087015|pid:none) Rattus norvegicus ATPase, Na+/K+ t...   373   e-101
JI165174_1(JI165174|pid:none) TSA: Ascaris suum ASCF_954_3805 mR...   373   e-101

Homology SLB248 vs Genome