Dictyostelium discoideum cDNA Clone SLA896

Size:		2.8k
3' sequence:	TM980320
5' sequence:	TM981201
Whole insert?:	*
Accession #:	
Remarks:	chimera?

Sequence SLA896

CCGCCCTTTT TTTTTTTTTT TATTATTATT ATTACTTAAT CTTTTTTTTA
ATTGGCAGTA CGAGTAGTAG TGAAAGATTT AACTTCTGGA TTCTTTTTAC
CTGGGTTACC AAGTACTTGT TTGAATGGAG AACCTTCAAT GTGTTTACCG
TTTAATTTGA CACCAGTTGA GAAACGACCA TTACCAACTA AAGAGTAAGC
GGCAGTATAA GTACCATCTT GGTTATCAAT AGCATCGAGA GTGATTTCTT
CAGCTGGACC AGTGATAGAG ACTTCAAATT TATCACCACC ATAGGTTTTA
ACTTCACCTT TCTTATTTTT AGCAGCGACG GTAAAAGTGA ATGAACCGAA
TGATGAATCT TCACCATTGG CACCTTCAAT GCATTTGACA TCGATTGGCA
TATTTTTGAT TGGATTACCA CGGAGGGTGA CATTAACATT GTAGTTACCT
TCAACTGGGG CATCATAGAC AACACCATAA GTACCGTCAT TGTTATCGGT
AACTTTGGCA TCAACGACTA AACCATCTGG ACCATTGATA GCGACTTCAA
ATGGATCACC ACCATCGGTA CGAGCAACAC CTTTAGTGTC AACGGCGAAA
ATAGTGAATT CAGCTGGGGC ATTATCAAAT ACTTT----- -----TCAAT
CCATGTTTTT CCACCTGGAG CAGCAGCCAT TCCTTTATTT TTTTATTTTT
TTTTTTTTTT TATTTATACA AGAATATATA TACAAAATAT TAAAATTTAT
TGGAAGGTAG TTTACACAAC TCAATAAATA ATAATTTAAT AAATAAATAA
TAATTTAATA AATAAATAAA TAAAAATGGT AAGATAA

Translated Amino Acid Sequence SLA896

ppfffffiiiit*sff*lavrvvvkdltsgfflpglpstclngepsmclpfnltpvekrp
lptke*aav*vpswlsiasrvissagpvietsnlspp*vltspflflaatvkvnepndes
splapsmhltsigifliglprrvtltl*lpstgas*ttp*VPSLLSVTLASTTKPSGPLI
ATSNGSPPSVRATPLVSTAKIVNSAGALSNT---

---SIHVFPPGAAAIPLFFYFFFFFIYTRIYIQNIKIYWKVVYTTQ*iii**innnlink
*ikmvr*

Homology SLA896 vs CSM-cDNA

Sequences producing significant alignments:                      (bits) Value


SLA896 (SLA896Q) /CSM/SL/SLA8-D/SLA896Q.Seq.d/                       1213   0.0
SLH892 (SLH892Q) /CSM/SL/SLH8-D/SLH892Q.Seq.d/                       1170   0.0
SLC663 (SLC663Q) /CSM/SL/SLC6-C/SLC663Q.Seq.d/                       1170   0.0
VFK681 (VFK681Q) /CSM/VF/VFK6-D/VFK681Q.Seq.d/                       1162   0.0
AHD645 (AHD645Q) /CSM/AH/AHD6-B/AHD645Q.Seq.d/                       1162   0.0
VHP494 (VHP494Q) /CSM/VH/VHP4-D/VHP494Q.Seq.d/                       1146   0.0
SFH146 (SFH146Q) /CSM/SF/SFH1-B/SFH146Q.Seq.d/                       1146   0.0
SFD611 (SFD611Q) /CSM/SF/SFD6-A/SFD611Q.Seq.d/                       1146   0.0
AHF883 (AHF883Q) /CSM/AH/AHF8-D/AHF883Q.Seq.d/                       1146   0.0
AHB125 (AHB125Q) /CSM/AH/AHB1-B/AHB125Q.Seq.d/                       1146   0.0

Homology SLA896 vs DNA

Sequences producing significant alignments:                  (bits) Value  N


(X15430) Dictyostelium discoideum mRNA for gelation factor.      1162   0.0    2
(AU060296) Dictyostelium discoideum slug cDNA, clone SLA896.     1162   0.0    2
(AU039495) Dictyostelium discoideum slug cDNA, clone SLH892.     1162   0.0    2
(AU034632) Dictyostelium discoideum slug cDNA, clone SLC663.     1162   0.0    2
(BJ433717) Dictyostelium discoideum cDNA clone:ddv22a22, 3' ...  1162   0.0    1
(BJ350003) Dictyostelium discoideum cDNA clone:dda38i12, 3' ...  1162   0.0    2
(BJ446180) Dictyostelium discoideum cDNA clone:ddv61l24, 3' ...  1146   0.0    2
(BJ409189) Dictyostelium discoideum cDNA clone:dds39f23, 3' ...  1146   0.0    2
(BJ400915) Dictyostelium discoideum cDNA clone:dds15k11, 3' ...  1146   0.0    1
(BJ399919) Dictyostelium discoideum cDNA clone:dds8e04, 3' e...  1146   0.0    1

Homology SLA896 vs Protein

Sequences producing significant alignments:                      (bits) Value


AF080395_1(AF080395|pid:none) Entamoeba histolytica actin bindin...    94   9e-18
FQ310506_72(FQ310506|pid:none) Dicentrarchus labrax chromosome s...    77   1e-12
AK131179_1(AK131179|pid:none) Mus musculus mRNA for mFLJ00343 pr...    76   2e-12
BC151024_1(BC151024|pid:none) Mus musculus filamin, alpha, mRNA ...    76   2e-12
(Q99KQ2) RecName: Full=Filamin-A;          Short=FLN-A; AltName:...    76   2e-12
FJ416060_1(FJ416060|pid:none) Rattus norvegicus filamin alpha (F...    76   2e-12
AL807376_1(AL807376|pid:none) Mouse DNA sequence from clone RP23...    76   2e-12
AL807376_3(AL807376|pid:none) Mouse DNA sequence from clone RP23...    76   2e-12
U70560_1(U70560|pid:none) Entamoeba histolytica actin binding pr...    76   2e-12
BC060276_1(BC060276|pid:none) Mus musculus filamin C, gamma, mRN...    76   2e-12

Homology SLA896 vs Genome