Dictyostelium discoideum cDNA Clone SLA217

Size:		1.5k
3' sequence:	RY970519
5' sequence:	TM981203
Whole insert?:	*
Accession #:	
Remarks:	*

Sequence SLA217

ATAACTAATA AAATGTCATT CAATTCAAGA ATTGAAACTA TTTCTCGTCA
CTTAAGCACT GGACCAATTT TAGAATCAAA TCCAACTTCT GGATCAGTTA
AATCAGGAGA TGATATTGTA ATTGTTGCAC CATTTCGTAC AGCAATTTGT
AAAGCTAAAA GAGGAGCATT CAAAGAGACA GCACCAGATG ATTTATTAGC
ACCAGTTATT AAACATATTA TCAAAGTTAC CAAATTAGAT CCAAAATTAA
TTGGAGATGT TGTTATGGGA GCAGTATTAC CAAGATCATC ACAAGGTGCA
ACCGAAGTTA GAGTTGCCAC ATTATTAGCA GGTTTACCAA AGGAAGTACC
ATGTTATACA GTCAACAGAC AATGTTCATC AGGTTTACAA GCAATTGCCA
ATTGTGCAGC AGCAGTCAAA GCAGGTTTCT ATGACATTGG TTTAGCAGGC
GGTGTAGAAT CAATGAGTTT AAATCCAATG GCATGGGATG GTGGTTTCAA
CGAGGTTGCC CAAGAGGATC CAATCATTAG TGGTTGTTAC AACACTATGG
GTCAAACCTC TGAA------ ----AAGACC AGATGAATTC TCTGTAAATT
CACACAAGAA GGCAGGTGCC GCCCAAAAAG CAGGTAAATT TGACGATGAA
ATCGTTCCAG TCACCGTAAA GACCGAGGAT GGCAAAACCA TCGTCGTCGA
TAAAGACGAA GGTATCCGTG AGAAAACCAC CGTTGCAGAT TTGGCCAAAT
TAAAACCAGC TTTCAAAGAG GGTGGTACAA CCACCGCTGG TAACTCTAGT
CAAATGAGTG ATGGTGCCGC CGCTTGTTTA GTTATGAAAA GAAGTACCGC
CGAAAGATTG GGTCTCAAGG TTGAATTGGT TTTCGTAGCT TTTGCTGCTG
TCGGTGTCGA ACCATCCATT ATGGGTATTG GTCCAGCCGT TGCAATTCCA
GCCGCCTTAA AACAAGCTGG TCTCACCACT AAAGATATCG ACGTTTTTGA
AATCAATGAA GCTTTTGCTT CTCAAGCATT TTACAGTTGT AAGGTTTTGG
GTTTGGATAT GAACAAAGTT AATCCAAATG GCTCTGGTAT CGCTTTAGGT
CATCCATTAG GTGCTACTGG TGCCCGTCAA ATGGCTACCA TTTCAAGAGA
ATTACATCGT CGTAAAGGTA AATATGGTGT AATCTCTATG TGTATTGGTA
CTGGCTTAGG TGCTGCAGCT GTTGTTCGTA CAGATTATTA AAAAAAAAA

Translated Amino Acid Sequence SLA217

ITNKMSFNSRIETISRHLSTGPILESNPTSGSVKSGDDIVIVAPFRTAICKAKRGAFKET
APDDLLAPVIKHIIKVTKLDPKLIGDVVMGAVLPRSSQGATEVRVATLLAGLPKEVPCYT
VNRQCSSGLQAIANCAAAVKAGFYDIGLAGGVESMSLNPMAWDGGFNEVAQEDPIISGCY
NTMGQTSE---

---RPDEFSVNSHKKAGAAQKAGKFDDEIVPVTVKTEDGKTIVVDKDEGIREKTTVADLA
KLKPAFKEGGTTTAGNSSQMSDGAAACLVMKRSTAERLGLKVELVFVAFAAVGVEPSIMG
IGPAVAIPAALKQAGLTTKDIDVFEINEAFASQAFYSCKVLGLDMNKVNPNGSGIALGHP
LGATGARQMATISRELHRRKGKYGVISMCIGTGLGAAAVVRTDY*kk

Homology SLA217 vs CSM-cDNA

Sequences producing significant alignments:                      (bits) Value


SLA217 (SLA217Q) /CSM/SL/SLA2-A/SLA217Q.Seq.d/                       2397   0.0
SLH575 (SLH575Q) /CSM/SL/SLH5-D/SLH575Q.Seq.d/                       1306   0.0
SLG762 (SLG762Q) /CSM/SL/SLG7-C/SLG762Q.Seq.d/                       1306   0.0
SLG603 (SLG603Q) /CSM/SL/SLG6-A/SLG603Q.Seq.d/                       1306   0.0
SLE133 (SLE133Q) /CSM/SL/SLE1-B/SLE133Q.Seq.d/                       1306   0.0
SSJ636 (SSJ636Q) /CSM/SS/SSJ6-B/SSJ636Q.Seq.d/                       1298   0.0
AFO183 (AFO183Q) /CSM/AF/AFO1-D/AFO183Q.Seq.d/                       1283   0.0
VFM101 (VFM101Q) /CSM/VF/VFM1-A/VFM101Q.Seq.d/                       1281   0.0
VFL724 (VFL724Q) /CSM/VF/VFL7-A/VFL724Q.Seq.d/                       1267   0.0
CFF140 (CFF140Q) /CSM/CF/CFF1-B/CFF140Q.Seq.d/                       1267   0.0

Homology SLA217 vs DNA

Sequences producing significant alignments:                  (bits) Value  N


AC116986|AC116986.2 Dictyostelium discoideum chromosome 2 ma...  1306   0.0    2
CA917334|CA917334.1 EST641481 GPOD Medicago truncatula cDNA ...    40   1e-15  6
CA858588|CA858588.1 EST635843 GLSD Medicago truncatula cDNA ...    40   8e-12  5
CB005315|CB005315.1 VVC011E10_126660 An expressed sequence t...    60   5e-11  4
AU089542|AU089542.1 Lotus corniculatus var. japonicus flower...    44   4e-10  4
AL439008|AL439008.1 T7 end of clone BD0AA001H03 of library B...    44   5e-10  4
CB008288|CB008288.1 VVC055H06_148036 An expressed sequence t...    60   2e-09  3
BM065622|BM065622.1 KS07005E12 KS07 Capsicum annuum cDNA, mR...    68   3e-08  2
CA515447|CA515447.1 KS09042A06 KS09 Capsicum annuum cDNA, mR...    68   3e-08  2
BM066045|BM066045.1 KS07010C02 KS07 Capsicum annuum cDNA, mR...    68   3e-08  2

Homology SLA217 vs Protein

Sequences producing significant alignments:                      (bits) Value


AC116986_75(AC116986|pid:none) Dictyostelium discoideum chromoso...   402   0.0
AM474896_9(AM474896|pid:none) Vitis vinifera contig VV79X001698....   236   e-109
AK353358_1(AK353358|pid:none) Thellungiella halophila mRNA, comp...   239   e-107
(Q56WD9) RecName: Full=3-ketoacyl-CoA thiolase 2, peroxisomal;  ...   238   e-107
T07989(T07989) acetyl-CoA C-acyltransferase (EC 2.3.1.16) precur...   237   e-107
AB333797_1(AB333797|pid:none) Glycine max mRNA for peroxisomal 3...   232   e-106
AX025481_1(AX025481|pid:none) Sequence 7 from Patent WO0032789.       234   e-106
BT070433_1(BT070433|pid:none) Picea sitchensis clone WS02729_F15...   234   e-106
EU964831_1(EU964831|pid:none) Zea mays clone 281881 3-ketoacyl-C...   240   e-106
BT034496_1(BT034496|pid:none) Zea mays full-length cDNA clone ZM...   240   e-106

Homology SLA217 vs Genome