Homology SLA123 vs Protein
Query= SLA123 (SLA123Q) /CSM/SL/SLA1-A/SLA123Q.Seq.d/
(661 letters)
Database: nrp_B
5,349,213 sequences; 1,732,582,204 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
(P15269) RecName: Full=Spore coat protein SP70; AltName: Full=Pr... 162 4e-46
S07638(S07638;A60942;B60942) spore coat protein SP96 precursor -... 36 0.032
(P14328) RecName: Full=Spore coat protein SP96; &AC117075_49(AC... 36 0.032
(Q1AGV7) RecName: Full=Syndecan 4-A; AltName: Full=Syndecan-4.1;... 36 1.4
BC131894_1(BC131894|pid:none) Xenopus laevis syndecan-4.1, mRNA ... 36 1.4
A96599(A96599) protein F20N2.10 [imported] - Arabidopsis thalian... 35 4.0
CP002025_1060(CP002025|pid:none) Brachyspira pilosicoli 95/1000,... 34 5.3
CP002874_2829(CP002874|pid:none) Brachyspira intermedia PWS/A, c... 34 6.9
CP001357_1645(CP001357|pid:none) Brachyspira hyodysenteriae WA1,... 34 6.9
>(P15269) RecName: Full=Spore coat protein SP70; AltName:
Full=Protein Beejin; Flags: Precursor;
Length = 537
Score = 162 bits (409), Expect(2) = 4e-46
Identities = 83/136 (61%), Positives = 83/136 (61%)
Frame = +1
Query: 67 KPKCLTCKDMHCESNGLLCVLTPQKKTDEEXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX 246
KPKCLTCKDMHCESNGLLCVLTPQKKTDEE
Sbjct: 384 KPKCLTCKDMHCESNGLLCVLTPQKKTDEECCPIIPICINPSTIAASTIATTTASTRHST 443
Query: 247 XXXXXXLVXXXXXXXXXXXXXXXXXDEESSDPNAILGLFEDDIFWGDNDEYFSDNYRYVD 426
LV DEESSDPNAILGLFEDDIFWGDNDEYFSDNYRYVD
Sbjct: 444 ASTIASLVTGTTSGGGGMGSFGGRSDEESSDPNAILGLFEDDIFWGDNDEYFSDNYRYVD 503
Query: 427 EEDIDEDFNGNDEFEI 474
EEDIDEDFNGNDEFEI
Sbjct: 504 EEDIDEDFNGNDEFEI 519
Score = 47.0 bits (110), Expect(2) = 4e-46
Identities = 19/19 (100%), Positives = 19/19 (100%)
Frame = +2
Query: 11 PKGYKCKLYADGPTCVKIE 67
PKGYKCKLYADGPTCVKIE
Sbjct: 365 PKGYKCKLYADGPTCVKIE 383
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 5349213
Number of Hits to DB: 1,115,729,097
Number of extensions: 17300832
Number of successful extensions: 44904
Number of sequences better than 10.0: 9
Number of HSP's gapped: 44148
Number of HSP's successfully gapped: 13
Length of query: 220
Length of database: 1,732,582,204
Length adjustment: 127
Effective length of query: 93
Effective length of database: 1,053,232,153
Effective search space: 97950590229
Effective search space used: 97950590229
Neighboring words threshold: 12
Window for multiple hits: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
S2: 31 (16.5 bits)
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