Dictyostelium discoideum cDNA Clone SLA123

Size:		1.5k
3' sequence:	RY970508
5' sequence:	*
Whole insert?:	*
Accession #:	
Remarks:	*

Sequence SLA123

---------- CCAAAAGGTT ACAAATGCAA ACTCTATGCT GATGGTCCAA
CATGTGTAAA GATTGAAAAC CAAAATGTCT CACTTGTAAA GATATGCATT
GTGAGTCAAA TGGATTACTC TGTGTCTTGA CTCCACAAAA GAAGACTGAT
GAAGAATGTT GTCCAATTAT TCCAATCTGT ATCAATCCAT CAACTATTGC
CGCATCCACT ATTGCCACTA CAACTGCATC AACTCGTCAC TCAACTGCCT
CAACAATTGC CTCATTAGTC ACTGGTACCA CAAGTGGTGG TGGTGGTATG
GGTTCATTTG GTGGTCGATC CGATGAAGAA TCAAGTGATC CAAATGCTAT
ACTTGGTCTC TTTGAAGACG ATATTTTCTG GGGTGATAAT GATGAATACT
TTAGTGATAA CTACCGTTAT GTTGATGAAG AAGATATTGA TGAAGATTTC
AATGGTAATG ATGAATTTGA AATTGATGTT GAAGGTGATT TCCAAGAAGA
TGATTTCGAA GAAGAATATG CATTTTATTA AATTAAACTT TTTTTCATAA
AAAAATAATA ATAATAATTT AATAACTAAT CATTATCATC AATAATAACA
TTATAATATT ACTTTGAATA ACAATACTTT TTTTGAATAT TCAAAGACTT
TACAAAAAAA A

Translated Amino Acid Sequence SLA123

---krlqmqtlc*wsnmckd*KPKCLTCKDMHCESNGLLCVLTPQKKTDEECCPIIPICI
NPSTIAASTIATTTASTRHSTASTIASLVTGTTSGGGGMGSFGGRSDEESSDPNAILGLF
EDDIFWGDNDEYFSDNYRYVDEEDIDEDFNGNDEFEIDVEGDFQEDDFEEEYAFY*iklf
fikk****fnn*slssiitl*yyfe*qyff*ifkdftkk

Homology SLA123 vs CSM-cDNA

Sequences producing significant alignments:                      (bits) Value


SLA123 (SLA123Q) /CSM/SL/SLA1-A/SLA123Q.Seq.d/                       1013   0.0
SSM572 (SSM572Q) /CSM/SS/SSM5-C/SSM572Q.Seq.d/                        999   0.0
SSJ101 (SSJ101Q) /CSM/SS/SSJ1-A/SSJ101Q.Seq.d/                        999   0.0
SSG296 (SSG296Q) /CSM/SS/SSG2-D/SSG296Q.Seq.d/                        999   0.0
SSF391 (SSF391Q) /CSM/SS/SSF3-D/SSF391Q.Seq.d/                        999   0.0
SSC714 (SSC714Q) /CSM/SS/SSC7-A/SSC714Q.Seq.d/                        999   0.0
SSC195 (SSC195Q) /CSM/SS/SSC1-D/SSC195Q.Seq.d/                        999   0.0
SLE689 (SLE689Q) /CSM/SL/SLE6-D/SLE689Q.Seq.d/                        999   0.0
SLE453 (SLE453Q) /CSM/SL/SLE4-C/SLE453Q.Seq.d/                        999   0.0
SLA864 (SLA864Q) /CSM/SL/SLA8-C/SLA864Q.Seq.d/                        999   0.0

Homology SLA123 vs DNA

Sequences producing significant alignments:                  (bits) Value  N


AC115584|AC115584.2 Dictyostelium discoideum chromosome 2 ma...   904   0.0    7
M26238|M26238.1 D.discoideum spore coat protein SP70 gene, c...   904   0.0    2
AC116956|AC116956.2 Dictyostelium discoideum chromosome 2 ma...    38   7e-04  11
AC116960|AC116960.2 Dictyostelium discoideum chromosome 2 ma...    40   0.005  10
AC005140|AC005140.8 Plasmodium falciparum chromosome 12 clon...    50   0.042  1
AE014851|AE014851.1 Plasmodium falciparum 3D7 chromosome 12,...    50   0.042  1
CA855068|CA855068.1 PfESToac46b06.y1 Plasmodium falciparum 3...    50   0.042  1
AC116957|AC116957.2 Dictyostelium discoideum chromosome 2 ma...    30   0.077  13
AC117176|AC117176.2 Dictyostelium discoideum chromosome 2 ma...    32   0.11   10
AC116982|AC116982.2 Dictyostelium discoideum chromosome 2 ma...    34   0.15   9

Homology SLA123 vs Protein

Sequences producing significant alignments:                      (bits) Value


(P15269) RecName: Full=Spore coat protein SP70; AltName: Full=Pr...   162   4e-46
S07638(S07638;A60942;B60942) spore coat protein SP96 precursor -...    36   0.032
(P14328) RecName: Full=Spore coat protein SP96;  &AC117075_49(AC...    36   0.032
(Q1AGV7) RecName: Full=Syndecan 4-A; AltName: Full=Syndecan-4.1;...    36   1.4
BC131894_1(BC131894|pid:none) Xenopus laevis syndecan-4.1, mRNA ...    36   1.4
A96599(A96599) protein F20N2.10 [imported] - Arabidopsis thalian...    35   4.0
CP002025_1060(CP002025|pid:none) Brachyspira pilosicoli 95/1000,...    34   5.3
CP002874_2829(CP002874|pid:none) Brachyspira intermedia PWS/A, c...    34   6.9
CP001357_1645(CP001357|pid:none) Brachyspira hyodysenteriae WA1,...    34   6.9

Homology SLA123 vs Genome