Dictyostelium discoideum cDNA Clone SLA116

Size:		1.5k
3' sequence:	RY970508
5' sequence:	-
Whole insert?:	*
Accession #:	
Remarks:	*

Sequence SLA116

---------- CAAACCAGTT CAACATAATG CCCAACAACA ACATGCTAAA
CCAGCTGCTC ATACTGCTGC CAAACCAGTT CAACACAATG CTGCTCAACA
ACATGCTAAA CCAGCTGCCC ATGGCGCCAA ACCAGCTGTT AATGCTGCCA
GACCAGTTCA ACACAATGCT GCTCAACAAC ATGCTAAACC AGCTGCTCAT
ACTGCTGCCA AACCAGTTCA ACACAATGCT GCTCAACAAC ATGCTAAACC
AGCTGCCAAA CCAGCCAAAT TAACCAATGC CCAAAAATTA CAACAAGAAC
ACCAAAGACA AGAAGCTCTC GCAAAACAAC AAGCTCGTAT TAGACAACAA
AATCTTGTCA AACAAGCTGC CCAAAAGAAA CAAACCTCTC AACGTGCTGC
CTCTAAAAAT CAAGCTAGAC CAGCAACTCA AAAGAGAAAT TAAATTTATT
ATTTAGTATA ATTATACAAT TGAAAAATTA TAAATTGAGA TTTCTTTTTG
TTGGTGATAG GTATTCAATA GATACACGAA CTTTCAAATC ATTTTTCAAT
TTCTTTTATT TACCAATTGT TAAAACTCAT TTTATTTTAT TTTTATCTCT
TACATATCTC TTTTTCTATT AATAATAAAA ATAATAATAT TAC

Translated Amino Acid Sequence SLA116

---KPVQHNAQQQHAKPAAHTAAKPVQHNAAQQHAKPAAHGAKPAVNAARPVQHNAAQQH
AKPAAHTAAKPVQHNAAQQHAKPAAKPAKLTNAQKLQQEHQRQEALAKQQARIRQQNLVK
QAAQKKQTSQRAASKNQARPATQKRN*iyylv*lyn*kiin*dffllvigiq*ihelsnh
fsisfiyqllklilfyfyllhisfsinnknnni

Homology SLA116 vs CSM-cDNA

Sequences producing significant alignments:                      (bits) Value


SLB726 (SLB726Q) /CSM/SL/SLB7-B/SLB726Q.Seq.d/                       1124   0.0
SLA116 (SLA116Q) /CSM/SL/SLA1-A/SLA116Q.Seq.d/                       1124   0.0
SHJ113 (SHJ113Q) /CSM/SH/SHJ1-A/SHJ113Q.Seq.d/                       1124   0.0
SFJ585 (SFJ585Q) /CSM/SF/SFJ5-D/SFJ585Q.Seq.d/                       1124   0.0
SFJ571 (SFJ571Q) /CSM/SF/SFJ5-C/SFJ571Q.Seq.d/                       1124   0.0
SFH246 (SFH246Q) /CSM/SF/SFH2-B/SFH246Q.Seq.d/                       1124   0.0
SFE454 (SFE454Q) /CSM/SF/SFE4-C/SFE454Q.Seq.d/                       1124   0.0
SFB772 (SFB772Q) /CSM/SF/SFB7-C/SFB772Q.Seq.d/                       1124   0.0
CFJ772 (CFJ772Q) /CSM/CF/CFJ7-C/CFJ772Q.Seq.d/                       1124   0.0
CFJ668 (CFJ668Q) /CSM/CF/CFJ6-C/CFJ668Q.Seq.d/                       1124   0.0

Homology SLA116 vs DNA

Sequences producing significant alignments:                  (bits) Value  N


AC117075|AC117075.2 Dictyostelium discoideum chromosome 2 ma...  1124   0.0    5
X57149|X57149.1 D.discoideum EB4 gene for prespore vesicle p...   896   0.0    6
AC116305|AC116305.2 Dictyostelium discoideum chromosome 2 ma...    34   0.002  14
AC116984|AC116984.2 Dictyostelium discoideum chromosome 2 ma...    34   0.003  15
AC117176|AC117176.2 Dictyostelium discoideum chromosome 2 ma...    36   0.006  8
AL929231|AL929231.3 Zebrafish DNA sequence from clone BUSM1-...    38   0.011  9
BX248090|BX248090.10 Zebrafish DNA sequence from clone DKEY-...    34   0.014  8
AL928463|AL928463.1 Danio rerio EST sequence, clone 206-A02-1.     28   0.019  4
AE014840|AE014840.1 Plasmodium falciparum 3D7 chromosome 11 ...    40   0.027  10
BX170546|BX170546.1 Danio rerio genomic clone DKEY-171I20, g...    28   0.032  4

Homology SLA116 vs Protein

Sequences producing significant alignments:                      (bits) Value


(P08798) RecName: Full=Prespore vesicle protein;          Short=...   127   4e-28
S28358(S28358;S20090) prespore vesicle protein - slime mold (Dic...   123   8e-27
FN392319_558(FN392319|pid:none) Pichia pastoris GS115 chromosome...    39   0.20
CP001635_1549(CP001635|pid:none) Variovorax paradoxus S110 chrom...    38   0.34
(Q54G96) RecName: Full=Uncharacterized protein DDB_G0290301;           38   0.34
FQ670204_749(FQ670204|pid:none) Haemophilus influenzae F3047 gen...    38   0.45
CP002277_187(CP002277|pid:none) Haemophilus influenzae R2866, co...    38   0.45
U32470_3(U32470|pid:none) Haemophilus influenzae tolQRAB gene cl...    38   0.45
AE017194_2199(AE017194|pid:none) Bacillus cereus ATCC 10987, com...    37   0.58
AP008207_3128(AP008207|pid:none) Oryza sativa (japonica cultivar...    37   0.76

Homology SLA116 vs Genome