Dictyostelium discoideum cDNA Clone SLA111

Size:		1.3k
3' sequence:	RY970508
5' sequence:	-
Whole insert?:	*
Accession #:	
Remarks:	*

Sequence SLA111

---------- TACGTCACTG GTGTCTTTGC CGAAAATGAA TTAATCGATG
TTATCGGTGT AACCAAAGGT AAAGGTTTCA ATGGTGTCAT TAAAAGATGG
GGTGTCCGTA AATTACCAAG AAAGACCCAT AAAGGTTTAA GAAAGGTTGC
CTGTATTGGT GCATGGCATC CATCCCGTGT TAGTACCACC GTCCCAAGAG
CTGGTCAACT CGGTTACCAT CATCGTGTCG AAAGAAACAA GAAGATTTAC
AGAATCGGTC AAGCTCAACC AGAAGACGGT AAACAAATCT CAACCGGTAA
GACTGAATTC GATTTAACTG AAAAGACTAT CAATCCAATG GGTGGTTTCG
CTCACTACGG TATGGTTAAA CATGAATTCT TAATGCTTAA AGGTTGTGTT
GCTGGTCCAA GAAAGAGAGC CTTAACCTTA AGAAAGAGTA TCACCACTCA
AACTGGTCGT GCTGCCCTCG AGAAAATCAC TCTCAAATTC ATCGATACCT
CCAGCAAGTT TGGTCACGGT CTTCATCAAA CCGCTGAAGA TAAGACTAAA
TATTTCGGCG TCAAGAAATC AAGATCAACT AAGGCTTAAA TTCAATAAAT
TAGATTTCAG AGAGTTATCA AACATAAAAA AAAAAAAAAA AAAAAAA

Translated Amino Acid Sequence SLA111

---VTGVFAENELIDVIGVTKGKGFNGVIKRWGVRKLPRKTHKGLRKVACIGAWHPSRVS
TTVPRAGQLGYHHRVERNKKIYRIGQAQPEDGKQISTGKTEFDLTEKTINPMGGFAHYGM
VKHEFLMLKGCVAGPRKRALTLRKSITTQTGRAALEKITLKFIDTSSKFGHGLHQTAEDK
TKYFGVKKSRSTKA*iq*irfqrvikhkkkkkkk

Homology SLA111 vs CSM-cDNA

Sequences producing significant alignments:                      (bits) Value


SLA111 (SLA111Q) /CSM/SL/SLA1-A/SLA111Q.Seq.d/                       1219   0.0
VFN362 (VFN362Q) /CSM/VF/VFN3-C/VFN362Q.Seq.d/                       1217   0.0
VFI645 (VFI645Q) /CSM/VF/VFI6-B/VFI645Q.Seq.d/                       1217   0.0
VFF813 (VFF813Q) /CSM/VF/VFF8-A/VFF813Q.Seq.d/                       1217   0.0
VFD735 (VFD735Q) /CSM/VF/VFD7-B/VFD735Q.Seq.d/                       1217   0.0
VFC683 (VFC683Q) /CSM/VF/VFC6-D/VFC683Q.Seq.d/                       1217   0.0
SLH858 (SLH858Q) /CSM/SL/SLH8-C/SLH858Q.Seq.d/                       1217   0.0
SLH735 (SLH735Q) /CSM/SL/SLH7-B/SLH735Q.Seq.d/                       1217   0.0
SLH604 (SLH604Q) /CSM/SL/SLH6-A/SLH604Q.Seq.d/                       1217   0.0
SLH567 (SLH567Q) /CSM/SL/SLH5-C/SLH567Q.Seq.d/                       1217   0.0

Homology SLA111 vs DNA

Sequences producing significant alignments:                  (bits) Value  N


L08391|L08391.1 Dictyostelium discoideum ribosomal protein (...   759   0.0    2
CB890778|CB890778.1 taa53h06.x1 Hydra EST -III Hydra magnipa...    60   1e-18  3
CB889634|CB889634.1 taa39c02.x3 Hydra EST -III Hydra magnipa...    60   1e-18  3
CF601988|CF601988.1 tac45d08.x1 Hydra EST -IV Hydra magnipap...    60   2e-18  3
CD566466|CD566466.1 tac05h02.x1 Hydra EST -III Hydra magnipa...    60   2e-18  3
CF778120|CF778120.1 tad20h10.y1 Hydra EST -IV Hydra magnipap...    60   2e-18  3
CF780491|CF780491.1 tad20h10.x1 Hydra EST -IV Hydra magnipap...    60   2e-18  3
CF601165|CF601165.1 tac45d08.y1 Hydra EST -IV Hydra magnipap...    60   2e-18  3
CB888312|CB888312.1 taa90e07.x1 Hydra EST -III Hydra magnipa...    60   2e-18  3
CB888732|CB888732.1 taa80g11.x1 Hydra EST -III Hydra magnipa...    60   2e-18  3

Homology SLA111 vs Protein

Sequences producing significant alignments:                      (bits) Value


(P34113) RecName: Full=60S ribosomal protein L3;  &JC4254(JC4254...   390   e-107
BC158279_1(BC158279|pid:none) Xenopus tropicalis hypothetical pr...   258   1e-67
BT070643_1(BT070643|pid:none) Picea sitchensis clone WS02742_A15...   256   5e-67
HQ424752_1(HQ424752|pid:none) Euphydryas aurinia ribosomal prote...   254   2e-66
AJ720292_1(AJ720292|pid:none) Gallus gallus mRNA for hypothetica...   254   2e-66
BT034517_1(BT034517|pid:none) Zea mays full-length cDNA clone ZM...   254   2e-66
BT036034_1(BT036034|pid:none) Zea mays full-length cDNA clone ZM...   254   2e-66
AY395739_1(AY395739|pid:none) Nicotiana tabacum ribosomal protei...   254   2e-66
DQ241849_1(DQ241849|pid:none) Solanum tuberosum clone 187E04 rib...   253   5e-66
AM471157_1(AM471157|pid:none) Vitis vinifera contig VV78X211407....   252   1e-65

Homology SLA111 vs Genome