Dictyostelium discoideum cDNA Clone SLA104

Size:		1.2k
3' sequence:	RY970508
5' sequence:	RY970508
Whole insert?:	*
Accession #:	
Remarks:	*

Sequence SLA104

AATATTTCAC ACAATATATA AAATGTCATC TTATTTATTC ACTAGTGAAT
CCGTCACCGA AGTCATCCAG ATAAAATCTG TGATCAAGTA TCAGATGCTG
TTCTCGATGC TTGTTTAGCT CAAGATCCAT TATCAAAAGT TGCTTGTGAA
ACTGCAACCA AAACTGGTAT GGTTATGATT TTAGGTGAAA TTACCACCAA
AGCCAACGTT GACTATCAAA AAGTTGTTCG TGAAGCTGTT AAAAAGATTG
GTTATGATGA CTCATCAAAA GGTTTTGATT ACAAAACTTG CAATGTTTTA
GTTGCAATTG AACAACAATC ACCAGATATT GCTCAAGGTG TCCACATTGG
TAAAGTTAAC CCAGAAGATA TTGGTGCTGG TGATCAAGGT CACATGTTTG
GTTATGCCAC CAACGAAACC CCAACTTTAA TGCCACTTAC TCATTTCCTC
GCCTCTGAAT TAGTCAACAA ATTAACTGAA TTACGTCACA ATGGTACCTT
AGCCTGGGCT CGTCCAGATG CCAAGACTCA AGTCACTGTT GAATACAAAA
AAGAAGGTCA CAAAATCACT CCAGTCAGAG TACACACCAT CGTTATTTCA
ACTCAACACG ACGAAAAGTC ACCAACGAAC ---------- AATGGGTGAT
TTCTGGTTTA ACCGGTCGTA AGATCATCAT TGATTCATAT GGTGGTTGGG
GTGCTCACGG TGGTGGTGCT TTCTCTGGTA AAGATGCCAC TAAAGTCGAT
CGTTCTGGTG CTTACGCTGC TAGATGGATC GCTAAATCTT TAGTTGCCGC
TGGTCTTGCC GATCGTTGTT TAGTTCAAGT TTCATACTCT ATTGGTGTTG
CCAAGCCACT CAGTGTCTTT GTTGATACCT ATGGTACCGG TAAAAAGACT
GATGCTGAAA TCCTTGCCAT CATCGATAAT AACTTTGATT TACGTCCAGG
TTGTTTAATG CGTGACCTCC AATTAACTCG TCCAATTTTC CAAAAAACTG
CCTCTGGTGG TCACTTTGGT AGAAATGATC CAGACTTTAC CTGGGAAACC
GTCAAAGAAC TCAAGATGTA AGGATAGATC AATGAATAAA TAAGATAGAT
AAATAAGTGA AAAAAAAAAA ATATAATAAT CAAAAAAAAA AAAAAAAAAA

Translated Amino Acid Sequence SLA104

nishni*nvilfih**IRHRSHPDKICDQVSDAVLDACLAQDPLSKVACETATKTGMVMI
LGEITTKANVDYQKVVREAVKKIGYDDSSKGFDYKTCNVLVAIEQQSPDIAQGVHIGKVN
PEDIGAGDQGHMFGYATNETPTLMPLTHFLASELVNKLTELRHNGTLAWARPDAKTQVTV
EYKKEGHKITPVRVHTIVISTQHDEKSPTN---

---WVISGLTGRKIIIDSYGGWGAHGGGAFSGKDATKVDRSGAYAARWIAKSLVAAGLAD
RCLVQVSYSIGVAKPLSVFVDTYGTGKKTDAEILAIIDNNFDLRPGCLMRDLQLTRPIFQ
KTASGGHFGRNDPDFTWETVKELKM*g*ine*ir*ink*kkkniiikkkkkk

Homology SLA104 vs CSM-cDNA

Sequences producing significant alignments:                      (bits) Value


SLA104 (SLA104Q) /CSM/SL/SLA1-A/SLA104Q.Seq.d/                       2139   0.0
VFN128 (VFN128Q) /CSM/VF/VFN1-B/VFN128Q.Seq.d/                       1221   0.0
VFM766 (VFM766Q) /CSM/VF/VFM7-C/VFM766Q.Seq.d/                       1221   0.0
VFL503 (VFL503Q) /CSM/VF/VFL5-A/VFL503Q.Seq.d/                       1221   0.0
VFL319 (VFL319Q) /CSM/VF/VFL3-A/VFL319Q.Seq.d/                       1221   0.0
VFL166 (VFL166Q) /CSM/VF/VFL1-C/VFL166Q.Seq.d/                       1221   0.0
VFI164 (VFI164Q) /CSM/VF/VFI1-C/VFI164Q.Seq.d/                       1221   0.0
VFI116 (VFI116Q) /CSM/VF/VFI1-A/VFI116Q.Seq.d/                       1221   0.0
VFF889 (VFF889Q) /CSM/VF/VFF8-D/VFF889Q.Seq.d/                       1221   0.0
VFF635 (VFF635Q) /CSM/VF/VFF6-B/VFF635Q.Seq.d/                       1221   0.0

Homology SLA104 vs DNA

Sequences producing significant alignments:                  (bits) Value  N


AJ390497|AJ390497.1 Candida albicans partial mRNA for S-aden...   107   2e-58  4
AX830438|AX830438.1 Sequence 1158 from Patent WO03072602.         100   3e-51  6
AX819408|AX819408.1 Sequence 1158 from Patent EP1338608.          100   3e-51  6
AX595308|AX595308.1 Sequence 962 from Patent EP1258494.           100   3e-51  6
M23368|M23368.1 Saccharomyces cerevisiae S-adenosylmethionin...   100   3e-50  6
U33057|U33057.1 Saccharomyces cerevisiae chromosome IV cosmi...   100   1e-42  7
Z71271|Z71271.1 C.roseus mRNA for S-adenosyl-L-methionine sy...    82   5e-33  4
CD858942|CD858942.1 CI.003K13F020204 CI Pisum sativum cDNA c...    82   6e-33  4
AL424144|AL424144.1 T7 end of clone AZ0AA012F03 of library A...    78   7e-33  5
AJ001705|AJ001705.1 Schizosaccharomyces pombe sam1 gene.           86   1e-32  6

Homology SLA104 vs Protein

Sequences producing significant alignments:                      (bits) Value


(Q54F07) RecName: Full=S-adenosylmethionine synthase;          S...   604   e-173
AY324626_1(AY324626|pid:none) Amoeba proteus S-adenosylmethionin...   430   e-119
AB461924_1(AB461924|pid:none) Cylindrotheca closterium MAT mRNA ...   423   e-116
AB461925_1(AB461925|pid:none) Ditylum brightwellii MAT mRNA for ...   417   e-115
AB461922_1(AB461922|pid:none) Asterionella glacialis MAT mRNA fo...   417   e-115
HE574556_1(HE574556|pid:none) Pinus pinaster mRNA for S-adenosyl...   416   e-114
FQ311436_134(FQ311436|pid:none) Sporisorium reilianum SRZ2 chrom...   412   e-113
FJ404748_1(FJ404748|pid:none) Porphyra yezoensis putative S-aden...   412   e-113
FR824088_8(FR824088|pid:none) Albugo laibachii Nc14, genomic con...   408   e-112
(A9NUH8) RecName: Full=S-adenosylmethionine synthase 1;         ...   408   e-112

Homology SLA104 vs Genome