Dictyostelium discoideum cDNA Clone SLA103

Size:		1.6k
3' sequence:	RY970508
5' sequence:	TM981203
Whole insert?:	*
Accession #:	
Remarks:	*

Sequence SLA103

CAAATTTTCA AAGATACAAC TTCAAGAGAT AATAAAAAAA AATTGATAAC
AATTCCTATT GCCAAAGAGG ATAGTCAATC ATTTGGTTCA CTCTCTATCA
CCTATCAAAA GTTTTTAAAT GATTCAGTTA GCTTTGCAAA TAAATTAATT
GAAAAAGGTA TTAAAACTGG TGATGTAGTT TCATTAGTTA TTACAAATGG
TTATCCAATT TTATCATGTT TCTTGGGATC AACATTTGCA AGATGTATTG
CAGCACCATT AAATTCAGCA TATAAGAGTG AAGAATTTAA TTTCTATTAT
AAAGATATGG GAGCAAATAT TGTTATTGTT CAAAAAGGGT TAAGTGAAGC
ATTGAAATCA GCCAAGGAAT TAGGTATTAA AGTTTGGGAA ATTGAAAATG
TTGAAAATGA AAAGGAAGGT AAACTTTATT ATAGAATTAC AGATCCAAGC
AATGGAGATG ACTTGATTTT CTCAAGTGAA ACAATTTCAG GAGAGGATGA
AGGTGATAAA ATTAAATTGG AGACTGTTCC AGATAAAGAT GACAAAGCAT
TGTTTTTGCA TACTAGTGGT AGCACTGGCA GACCAAAGGG TGTACCATTG
ACTCATGAAA ---------- AGAGGCTTCC CACCAAATGG CATCGAACCC
ATTGCCACAA GACGGTCCAA GAAAGCCTGG TAGCGTCGGT AAGGGATTCA
ATGTTCAAAT TAGTATTGTC AATGACAATG GCGAGCATCA AAAACAAGGT
GATGTAGGTG AAGTTTGTAT CAAGGGCAAG AATGTTATGC ATGGTTATCA
TAATAATCCA CAAGCAAACA TTGATAACTT TACAAAGGAT GGTTGGTTCC
TCACTGGTGA TATCGGTTAT TTAGATCAAG ACGGCTACTT GATTCTCAAG
GGTAGAAAGA AGGAAATCAT CAATAGAGGT GGTGAGAAAA TCTCCCCATT
GGAAGTTGAT AATGCTCTCT TGGAAAATGA TAAAATTCTC GAAGCTGTTT
GCTTTGGTGT ACCAGATGAA AAGTATGGCG AAGAGATTTG GGCTGCCGTC
ATCCCAAAAG TACCTCAATC AATTACAGTC GAAGAAATCA CCCAATTCCT
CCAAAAGAAA TTAATCTCTT TCAAAGTGCC AAAGAAAATC ATTATCACTG
ATAATTTCCC AAAAACTGCT TCAGGTAAAA TTCAAAGAAG ATTCATTGCA
GATTTCTTTT TAAAACAACA AAATCAATAA ATTAAATTTA AATTATAAAA
AAAAAAAAAA AAAAAAAAAA

Translated Amino Acid Sequence SLA103

QIFKDTTSRDNKKKLITIPIAKEDSQSFGSLSITYQKFLNDSVSFANKLIEKGIKTGDVV
SLVITNGYPILSCFLGSTFARCIAAPLNSAYKSEEFNFYYKDMGANIVIVQKGLSEALKS
AKELGIKVWEIENVENEKEGKLYYRITDPSNGDDLIFSSETISGEDEGDKIKLETVPDKD
DKALFLHTSGSTGRPKGVPLTHE---

---EASHQMASNPLPQDGPRKPGSVGKGFNVQISIVNDNGEHQKQGDVGEVCIKGKNVMH
GYHNNPQANIDNFTKDGWFLTGDIGYLDQDGYLILKGRKKEIINRGGEKISPLEVDNALL
ENDKILEAVCFGVPDEKYGEEIWAAVIPKVPQSITVEEITQFLQKKLISFKVPKKIIITD
NFPKTASGKIQRRFIADFFLKQQNQ*ikfkl*kkkkkkk

Homology SLA103 vs CSM-cDNA

Sequences producing significant alignments:                      (bits) Value


SLA103 (SLA103Q) /CSM/SL/SLA1-A/SLA103Q.Seq.d/                       2357   0.0
VFF556 (VFF556Q) /CSM/VF/VFF5-C/VFF556Q.Seq.d/                       1237   0.0
SFF865 (SFF865Q) /CSM/SF/SFF8-C/SFF865Q.Seq.d/                       1237   0.0
CFH325 (CFH325Q) /CSM/CF/CFH3-B/CFH325Q.Seq.d/                       1237   0.0
SFJ267 (SFJ267Q) /CSM/SF/SFJ2-C/SFJ267Q.Seq.d/                       1235   0.0
AFF365 (AFF365Q) /CSM/AF/AFF3-C/AFF365Q.Seq.d/                       1235   0.0
SLC192 (SLC192Q) /CSM/SL/SLC1-D/SLC192Q.Seq.d/                       1233   0.0
CFI563 (CFI563Q) /CSM/CF/CFI5-C/CFI563Q.Seq.d/                       1229   0.0
AFO765 (AFO765Q) /CSM/AF/AFO7-C/AFO765Q.Seq.d/                       1205   0.0
SFG669 (SFG669Q) /CSM/SF/SFG6-C/SFG669Q.Seq.d/                       1189   0.0

Homology SLA103 vs DNA

Sequences producing significant alignments:                  (bits) Value  N


AC116920|AC116920.2 Dictyostelium discoideum chromosome 2 ma...    38   8e-06  15
AC116984|AC116984.2 Dictyostelium discoideum chromosome 2 ma...    42   9e-05  22
AC116957|AC116957.2 Dictyostelium discoideum chromosome 2 ma...    34   2e-04  22
AC117076|AC117076.2 Dictyostelium discoideum chromosome 2 ma...    38   3e-04  15
AX458785|AX458785.1 Sequence 25 from Patent WO0209295.             44   3e-04  3
AF503762|AF503762.1 Arabidopsis thaliana adenosine monophosp...    44   3e-04  3
AY117254|AY117254.1 Arabidopsis thaliana putative 4-coumarat...    44   3e-04  3
BT003376|BT003376.1 Arabidopsis thaliana 4-coumarate-CoA lig...    44   3e-04  3
AY050824|AY050824.1 Arabidopsis thaliana putative 4-coumarat...    44   4e-04  3
AY062759|AY062759.1 Arabidopsis thaliana 4-coumarate-CoA lig...    44   4e-04  3

Homology SLA103 vs Protein

Sequences producing significant alignments:                      (bits) Value


AF354454_1(AF354454|pid:none) Capsicum annuum putative acyl-CoA ...   236   3e-60
EF676481_1(EF676481|pid:none) Picea sitchensis clone WS02739_F21...   228   4e-58
CR382131_531(CR382131|pid:none) Yarrowia lipolytica strain CLIB1...   223   1e-56
AL606651_2(AL606651|pid:none) Oryza sativa genomic DNA, chromoso...   221   7e-56
CR380957_291(CR380957|pid:none) Candida glabrata strain CBS138 c...   220   1e-55
EU974597_1(EU974597|pid:none) Zea mays clone 453960 peroxisomal-...   219   3e-55
(O74976) RecName: Full=Putative peroxisomal-coenzyme A synthetas...   217   1e-54
FP929083_447(FP929083|pid:none) Leptosphaeria maculans JN3 lm_Su...   214   6e-54
CP003009_1425(CP003009|pid:none) Thielavia terrestris NRRL 8126 ...   214   8e-54
AP007157_804(AP007157|pid:none) Aspergillus oryzae RIB40 DNA, SC...   213   1e-53

Homology SLA103 vs Genome